PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378453	[[2460183, 2461188], [2461284, 2461450], [2461549, 2461684]]	[[2460907, 2461188], [2461284, 2461450], [2461549, 2461603]]
NM_001010926	[[2460183, 2461188], [2461284, 2461450], [2461549, 2461684]]	[[2460907, 2461188], [2461284, 2461450], [2461549, 2461603]]

Promoter

Chrom	Start	End	Description
chr1	2461692	2461710	CAGE_peak_1_at_HES5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I001685	1685220	1687479	1.24	[{'connected_gene': 'CDK11B', 'score': 11.36}, {'connected_gene': 'HES5', 'score': 5.87}, {'connected_gene': 'ANKRD65', 'score': 4.77}, {'connected_gene': 'GC01M001675', 'score': 0.77}, {'connected_gene': 'SLC35E2B', 'score': 0.44}]
chr1	GH01I003093	3093639	3095479	0.38	[{'connected_gene': 'MORN1', 'score': 14.93}, {'connected_gene': 'FAAP20', 'score': 13.89}, {'connected_gene': 'TP73-AS1', 'score': 13.18}, {'connected_gene': 'PRDM16', 'score': 12.63}, {'connected_gene': 'LINC00982', 'score': 12.63}, {'connected_gene': 'LOC100129534', 'score': 11.79}, {'connected_gene': 'ENSG00000234396', 'score': 11.76}, {'connected_gene': 'HES5', 'score': 5.57}, {'connected_gene': 'PIR58969', 'score': 0.39}, {'connected_gene': 'MIR4251', 'score': 0.29}]
chr1	GH01I002522	2522844	2530166	2.22	[{'connected_gene': 'PANK4', 'score': 555.73}, {'connected_gene': 'ENSG00000224387', 'score': 15.36}, {'connected_gene': 'MORN1', 'score': 15.02}, {'connected_gene': 'FAAP20', 'score': 13.92}, {'connected_gene': 'LOC100129534', 'score': 11.86}, {'connected_gene': 'ENSG00000234396', 'score': 11.79}, {'connected_gene': 'SLC35E2', 'score': 10.84}, {'connected_gene': 'MIB2', 'score': 10.29}, {'connected_gene': 'SLC35E2B', 'score': 9.91}, {'connected_gene': 'LOC100129381', 'score': 9.85}, {'connected_gene': 'MMEL1', 'score': 7.63}, {'connected_gene': 'ENSG00000272449', 'score': 5.8}, {'connected_gene': 'GC01P002529', 'score': 0.77}, {'connected_gene': 'HES5', 'score': 0.77}, {'connected_gene': 'GC01M002529', 'score': 0.77}, {'connected_gene': 'GC01P002503', 'score': 0.34}]
chr1	GH01I002128	2128493	2128555	0.42	[{'connected_gene': 'HES5', 'score': 2.79}, {'connected_gene': 'GC01M002102', 'score': 0.44}, {'connected_gene': 'GC01M002070', 'score': 0.22}, {'connected_gene': 'PRKCZ', 'score': 0.18}]
chr1	GH01I002855	2855994	2856148	0.22	[{'connected_gene': 'HES5', 'score': 2.62}, {'connected_gene': 'GC01M002810', 'score': 0.28}, {'connected_gene': 'PIR61730', 'score': 0.26}, {'connected_gene': 'GC01P002897', 'score': 0.26}]
chr1	GH01I002319	2319899	2323706	1.24	[{'connected_gene': 'ENSG00000272106', 'score': 5.35}, {'connected_gene': 'PLCH2', 'score': 5.34}, {'connected_gene': 'LOC100129534', 'score': 5.32}, {'connected_gene': 'HES5', 'score': 1.35}, {'connected_gene': 'GC01M002322', 'score': 0.77}, {'connected_gene': 'PIR31073', 'score': 0.39}, {'connected_gene': 'MORN1', 'score': 0.2}]
chr1	GH01I002532	2532785	2536119	1.16	[{'connected_gene': 'GC01M002535', 'score': 550.77}, {'connected_gene': 'ENSG00000224387', 'score': 15.39}, {'connected_gene': 'MMEL1', 'score': 11.91}, {'connected_gene': 'ENSG00000272449', 'score': 5.18}, {'connected_gene': 'HES5', 'score': 0.77}]
chr1	GH01I002530	2530253	2530312	0.76	[{'connected_gene': 'GC01P002529', 'score': 550.77}, {'connected_gene': 'HES5', 'score': 550.77}, {'connected_gene': 'GC01M002529', 'score': 550.77}, {'connected_gene': 'MORN1', 'score': 15.02}, {'connected_gene': 'FAAP20', 'score': 13.92}, {'connected_gene': 'LOC100129534', 'score': 11.86}, {'connected_gene': 'ENSG00000234396', 'score': 11.79}, {'connected_gene': 'SLC35E2', 'score': 10.84}, {'connected_gene': 'MIB2', 'score': 10.29}, {'connected_gene': 'SLC35E2B', 'score': 9.9}, {'connected_gene': 'LOC100129381', 'score': 9.85}, {'connected_gene': 'GC01M002535', 'score': 0.44}]