PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000318753	[[24981587, 24982379], [24984181, 24984297], [24985788, 24985917], [24988829, 24989030]]	[[24981853, 24982379], [24984181, 24984297], [24985788, 24985917], [24988829, 24989006]]
ENST00000446942	[[24981587, 24982379], [24984181, 24984297], [24984646, 24985233], [24985788, 24985917], [24988829, 24989033]]	[[24985212, 24985233], [24985788, 24985917], [24988829, 24989006]]
ENST00000491910	[[24981602, 24982379], [24984181, 24985361], [24985788, 24985917], [24988183, 24989040]]	None
ENST00000404045	[[24981616, 24982379], [24984181, 24984297], [24985788, 24985917], [24988183, 24988390], [24988829, 24989031]]	[[24988342, 24988390], [24988829, 24989006]]
ENST00000460524	[[24981629, 24982379], [24984181, 24985361], [24985788, 24985917], [24988829, 24989046]]	None
ENST00000495297	[[24984649, 24985233], [24985788, 24985917], [24988183, 24988252]]	None
ENST00000465334	[[24985132, 24985917], [24988829, 24989001]]	None
ENST00000464490	[[24985373, 24985581], [24985788, 24985917], [24988183, 24988390], [24989144, 24989175]]	None
NM_207644	[[24981590, 24982379], [24984181, 24984297], [24985788, 24985917], [24988829, 24989035]]	[[24981853, 24982379], [24984181, 24984297], [24985788, 24985917], [24988829, 24989006]]

Promoter

Chrom	Start	End	Description
chr22	24989014	24989057	CAGE_peak_1_at_FAM211B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr22	GH22I025402	25402131	25407088	1.7	[{'connected_gene': 'LRP5L', 'score': 571.87}, {'connected_gene': 'LRRC75B', 'score': 6.98}, {'connected_gene': 'LOC100419673', 'score': 5.14}, {'connected_gene': 'ENSG00000272977', 'score': 5.09}, {'connected_gene': 'PIR32639', 'score': 0.29}]
chr22	GH22I023766	23766254	23769043	2.04	[{'connected_gene': 'CHCHD10', 'score': 556.12}, {'connected_gene': 'MMP11', 'score': 550.77}, {'connected_gene': 'SMARCB1', 'score': 16.94}, {'connected_gene': 'VPREB3', 'score': 15.3}, {'connected_gene': 'ENSG00000234353', 'score': 12.33}, {'connected_gene': 'POM121L9P', 'score': 12.27}, {'connected_gene': 'SNRPD3', 'score': 10.67}, {'connected_gene': 'CABIN1', 'score': 10.6}, {'connected_gene': 'MIF-AS1', 'score': 10.38}, {'connected_gene': 'ZDHHC8P1', 'score': 10.0}, {'connected_gene': 'ENSG00000272578', 'score': 9.99}, {'connected_gene': 'ENSG00000272787', 'score': 9.73}, {'connected_gene': 'LRRC75B', 'score': 9.66}, {'connected_gene': 'C22orf15', 'score': 0.44}]
chr22	GH22I024591	24591950	24594656	2.16	[{'connected_gene': 'LRRC75B', 'score': 550.77}, {'connected_gene': 'GGT1', 'score': 27.9}, {'connected_gene': 'ENSG00000230947', 'score': 0.77}, {'connected_gene': 'SNRPD3', 'score': 0.28}]
chr22	GH22I024588	24588065	24589401	0.54	[{'connected_gene': 'GGT1', 'score': 0.77}, {'connected_gene': 'LRRC75B', 'score': 0.77}, {'connected_gene': 'SNRPD3', 'score': 0.29}]
chr22	GH22I024600	24600854	24604977	1.59	[{'connected_gene': 'GGT1', 'score': 580.72}, {'connected_gene': 'LRRC75B', 'score': 10.54}, {'connected_gene': 'CHCHD10', 'score': 5.09}, {'connected_gene': 'ENSG00000230947', 'score': 0.77}, {'connected_gene': 'BCRP3', 'score': 0.31}, {'connected_gene': 'SNRPD3', 'score': 0.25}]
chr22	GH22I024559	24559179	24560071	0.38	[{'connected_gene': 'GGT1', 'score': 12.88}, {'connected_gene': 'LRRC75B', 'score': 12.83}, {'connected_gene': 'ENSG00000230947', 'score': 12.82}, {'connected_gene': 'ADORA2A', 'score': 10.99}, {'connected_gene': 'SPECC1L', 'score': 10.95}, {'connected_gene': 'BCRP3', 'score': 5.85}, {'connected_gene': 'GUCD1', 'score': 5.33}, {'connected_gene': 'SNRPD3', 'score': 0.77}]
chr22	GH22I024583	24583108	24584671	1.51	[{'connected_gene': 'GGT1', 'score': 550.77}, {'connected_gene': 'POM121L9P', 'score': 5.7}, {'connected_gene': 'LRRC75B', 'score': 0.44}, {'connected_gene': 'SNRPD3', 'score': 0.31}]
chr22	GH22I024629	24629200	24629601	0.52	[{'connected_gene': 'ENSG00000230947', 'score': 13.07}, {'connected_gene': 'LRRC75B', 'score': 13.05}, {'connected_gene': 'GGT1', 'score': 13.02}, {'connected_gene': 'BCRP3', 'score': 0.77}]