PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000257901	[[52753789, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758089, 52758150], [52758745, 52758954], [52760769, 52761265]]	[[52754636, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758089, 52758150], [52758745, 52758954], [52760769, 52761189]]
ENST00000544265	[[52754339, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758150, 52758406]]	[[52754636, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758150, 52758204]]
ENST00000552537	[[52756634, 52756763], [52757029, 52757194], [52757851, 52757947], [52758089, 52758413]]	None
NM_001300810	[[52753789, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758150, 52758406]]	[[52754636, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758150, 52758204]]
NM_002283	[[52753789, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758089, 52758150], [52758745, 52758954], [52760769, 52761309]]	[[52754636, 52754830], [52755250, 52755282], [52756034, 52756255], [52756637, 52756763], [52757029, 52757194], [52757851, 52757947], [52758089, 52758150], [52758745, 52758954], [52760769, 52761189]]

Promoter

Chrom	Start	End	Description
chr12	52761262	52761267	CAGE_peak_1_at_KRT85_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I052348	52348617	52348631	0.2	[{'connected_gene': 'KRT89P', 'score': 0.44}, {'connected_gene': 'KRT85', 'score': 0.37}, {'connected_gene': 'GC12M052334', 'score': 0.14}]
chr12	GH12I052345	52345317	52348569	0.56	[{'connected_gene': 'KRT86', 'score': 9.57}, {'connected_gene': 'ENSG00000257829', 'score': 8.59}, {'connected_gene': 'ESPL1', 'score': 4.32}, {'connected_gene': 'KRT89P', 'score': 0.44}, {'connected_gene': 'KRT85', 'score': 0.34}, {'connected_gene': 'GC12M052334', 'score': 0.14}]
chr12	GH12I052371	52371068	52372103	0.58	[{'connected_gene': 'KRT86', 'score': 8.96}, {'connected_gene': 'KRT85', 'score': 0.77}, {'connected_gene': 'ENSG00000258253', 'score': 0.44}, {'connected_gene': 'GC12M052334', 'score': 0.17}]
chr12	GH12I052367	52367471	52367530	0.61	[{'connected_gene': 'KRT85', 'score': 550.77}, {'connected_gene': 'KRT89P', 'score': 0.31}, {'connected_gene': 'GC12M052334', 'score': 0.16}]
chr12	GH12I052372	52372637	52372858	0.76	[{'connected_gene': 'KRT85', 'score': 0.44}, {'connected_gene': 'ENSG00000258253', 'score': 0.44}, {'connected_gene': 'GC12M052334', 'score': 0.17}]
chr12	GH12I052358	52358637	52358766	0.52	[{'connected_gene': 'KRT84', 'score': 12.2}, {'connected_gene': 'KRT86', 'score': 10.41}, {'connected_gene': 'KRT83', 'score': 10.28}, {'connected_gene': 'KRT6C', 'score': 10.12}, {'connected_gene': 'KRT78', 'score': 9.35}, {'connected_gene': 'KRT4', 'score': 9.16}, {'connected_gene': 'KRT85', 'score': 0.44}, {'connected_gene': 'KRT89P', 'score': 0.37}, {'connected_gene': 'GC12M052334', 'score': 0.15}]
chr12	GH12I052351	52351777	52351926	0.2	[{'connected_gene': 'KRT83', 'score': 11.16}, {'connected_gene': 'KRT84', 'score': 11.04}, {'connected_gene': 'KRT86', 'score': 10.4}, {'connected_gene': 'KRT81', 'score': 10.38}, {'connected_gene': 'KRT7', 'score': 9.99}, {'connected_gene': 'KRT2', 'score': 9.36}, {'connected_gene': 'LOC283335', 'score': 4.67}, {'connected_gene': 'KRT89P', 'score': 0.39}, {'connected_gene': 'KRT85', 'score': 0.37}, {'connected_gene': 'GC12M052334', 'score': 0.14}]