PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378832	[[44069530, 44070090], [44071611, 44071671], [44072101, 44072172], [44072884, 44072954], [44073202, 44073269], [44074211, 44074309], [44074540, 44074618], [44074955, 44075056], [44076751, 44076841], [44077589, 44077635], [44077734, 44077876], [44079866, 44080009], [44080095, 44080249], [44081387, 44081527]]	[[44069586, 44070090], [44071611, 44071671], [44072101, 44072172], [44072884, 44072954], [44073202, 44073269], [44074211, 44074309], [44074540, 44074618], [44074955, 44075056], [44076751, 44076841], [44077589, 44077635], [44077734, 44077876], [44079866, 44080009], [44080095, 44080249], [44081387, 44081470]]
ENST00000527145	[[44069564, 44070090], [44071564, 44071671], [44072101, 44072172], [44072884, 44072954], [44073202, 44073269], [44074211, 44074309], [44074540, 44074618], [44074955, 44075056], [44076751, 44076841], [44077589, 44077635], [44077734, 44077876], [44079866, 44080009], [44080095, 44080249], [44081387, 44081500]]	[[44069586, 44070090], [44071564, 44071588]]
NM_001031854	[[44069530, 44070090], [44071611, 44071671], [44072101, 44072172], [44072884, 44072954], [44073202, 44073269], [44074211, 44074309], [44074540, 44074618], [44074955, 44075056], [44076751, 44076841], [44077589, 44077635], [44077734, 44077876], [44079866, 44080009], [44080095, 44080249], [44081387, 44081527]]	[[44069586, 44070090], [44071611, 44071671], [44072101, 44072172], [44072884, 44072954], [44073202, 44073269], [44074211, 44074309], [44074540, 44074618], [44074955, 44075056], [44076751, 44076841], [44077589, 44077635], [44077734, 44077876], [44079866, 44080009], [44080095, 44080249], [44081387, 44081470]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I044029	44029147	44033906	0.92	[{'connected_gene': 'ACCS', 'score': 23.0}, {'connected_gene': 'ENSG00000255165', 'score': 11.01}, {'connected_gene': 'ENSG00000244953', 'score': 6.19}, {'connected_gene': 'EXT2', 'score': 4.89}, {'connected_gene': 'GC11P043987', 'score': 0.26}, {'connected_gene': 'ACCSL', 'score': 0.14}]
chr11	GH11I043941	43941116	43946058	2.13	[{'connected_gene': 'C11orf96', 'score': 550.37}, {'connected_gene': 'SEC14L1P1', 'score': 17.47}, {'connected_gene': 'ALKBH3', 'score': 14.45}, {'connected_gene': 'EXT2', 'score': 14.41}, {'connected_gene': 'ENSG00000254907', 'score': 14.19}, {'connected_gene': 'TTC17', 'score': 13.93}, {'connected_gene': 'ACCS', 'score': 13.88}, {'connected_gene': 'ALKBH3-AS1', 'score': 11.8}, {'connected_gene': 'ENSG00000254409', 'score': 11.8}, {'connected_gene': 'LOC105376644', 'score': 10.33}, {'connected_gene': 'ENSG00000244953', 'score': 6.29}, {'connected_gene': 'ACCSL', 'score': 0.34}]
chr11	GH11I043930	43930992	43931070	0.48	[{'connected_gene': 'C11orf96', 'score': 0.44}, {'connected_gene': 'ACCSL', 'score': 0.44}, {'connected_gene': 'ENSG00000254409', 'score': 0.44}, {'connected_gene': 'ENSG00000244953', 'score': 0.37}]
chr11	GH11I043932	43932777	43934861	1.15	[{'connected_gene': 'C11orf96', 'score': 0.44}, {'connected_gene': 'ENSG00000244953', 'score': 0.39}, {'connected_gene': 'ACCSL', 'score': 0.39}, {'connected_gene': 'ENSG00000254409', 'score': 0.39}]
chr11	GH11I043935	43935167	43935514	0.43	[{'connected_gene': 'C11orf96', 'score': 0.44}, {'connected_gene': 'ENSG00000244953', 'score': 0.39}, {'connected_gene': 'ACCSL', 'score': 0.39}, {'connected_gene': 'ENSG00000254409', 'score': 0.39}]
chr11	GH11I043917	43917516	43929604	1.46	[{'connected_gene': 'C11orf96', 'score': 550.77}, {'connected_gene': 'ALKBH3', 'score': 13.48}, {'connected_gene': 'ALKBH3-AS1', 'score': 6.21}, {'connected_gene': 'ACCSL', 'score': 0.77}, {'connected_gene': 'ENSG00000254409', 'score': 0.77}]
chr11	GH11I044036	44036979	44037333	0.57	[{'connected_gene': 'C11orf96', 'score': 10.93}, {'connected_gene': 'ALKBH3-AS1', 'score': 10.92}, {'connected_gene': 'ACCS', 'score': 0.31}, {'connected_gene': 'GC11P043987', 'score': 0.25}, {'connected_gene': 'ACCSL', 'score': 0.13}]
chr11	GH11I044037	44037411	44037620	0.85	[{'connected_gene': 'C11orf96', 'score': 10.93}, {'connected_gene': 'ALKBH3-AS1', 'score': 10.92}, {'connected_gene': 'ACCS', 'score': 0.31}, {'connected_gene': 'GC11P043987', 'score': 0.23}, {'connected_gene': 'ACCSL', 'score': 0.13}]
chr11	GH11I043962	43962247	43963286	0.43	[{'connected_gene': 'C11orf96', 'score': 11.53}, {'connected_gene': 'ALKBH3-AS1', 'score': 11.51}, {'connected_gene': 'ENSG00000254409', 'score': 11.06}, {'connected_gene': 'ENSG00000244953', 'score': 0.37}, {'connected_gene': 'GC11P043987', 'score': 0.34}, {'connected_gene': 'ACCSL', 'score': 0.26}]
chr11	GH11I043953	43953566	43955008	0.59	[{'connected_gene': 'C11orf96', 'score': 11.76}, {'connected_gene': 'ALKBH3-AS1', 'score': 11.74}, {'connected_gene': 'ENSG00000254409', 'score': 11.67}, {'connected_gene': 'ALKBH3', 'score': 11.07}, {'connected_gene': 'LOC105376644', 'score': 11.07}, {'connected_gene': 'ENSG00000244953', 'score': 0.44}, {'connected_gene': 'GC11P043987', 'score': 0.29}, {'connected_gene': 'ACCSL', 'score': 0.29}]
chr11	GH11I043950	43950906	43952060	0.7	[{'connected_gene': 'C11orf96', 'score': 11.76}, {'connected_gene': 'ALKBH3-AS1', 'score': 11.74}, {'connected_gene': 'ENSG00000254409', 'score': 11.34}, {'connected_gene': 'ALKBH3', 'score': 11.07}, {'connected_gene': 'LOC105376644', 'score': 11.07}, {'connected_gene': 'ENSG00000244953', 'score': 0.77}, {'connected_gene': 'ACCSL', 'score': 0.29}, {'connected_gene': 'GC11P043987', 'score': 0.28}]
chr11	GH11I044034	44034524	44035834	0.2	[{'connected_gene': 'C11orf96', 'score': 10.94}, {'connected_gene': 'ALKBH3-AS1', 'score': 10.93}, {'connected_gene': 'EXT2', 'score': 4.74}, {'connected_gene': 'ACCS', 'score': 0.29}, {'connected_gene': 'GC11P043987', 'score': 0.25}, {'connected_gene': 'ACCSL', 'score': 0.14}]
chr11	GH11I044007	44007125	44007983	0.43	[{'connected_gene': 'ALKBH3-AS1', 'score': 10.81}, {'connected_gene': 'ENSG00000254409', 'score': 10.81}, {'connected_gene': 'ENSG00000244953', 'score': 4.94}, {'connected_gene': 'GC11P043987', 'score': 0.34}, {'connected_gene': 'ACCS', 'score': 0.22}, {'connected_gene': 'ACCSL', 'score': 0.17}]
chr11	GH11I043992	43992282	43993839	0.86	[{'connected_gene': 'ALKBH3-AS1', 'score': 11.46}, {'connected_gene': 'ENSG00000254409', 'score': 11.46}, {'connected_gene': 'GC11P043987', 'score': 0.44}, {'connected_gene': 'ACCS', 'score': 0.19}, {'connected_gene': 'ACCSL', 'score': 0.19}]
chr11	GH11I044013	44013732	44015895	0.43	[{'connected_gene': 'ALKBH3-AS1', 'score': 10.8}, {'connected_gene': 'ENSG00000254409', 'score': 10.8}, {'connected_gene': 'ACCS', 'score': 7.64}, {'connected_gene': 'EXT2', 'score': 5.3}, {'connected_gene': 'GC11P043987', 'score': 0.31}, {'connected_gene': 'ACCSL', 'score': 0.16}]
chr11	GH11I044018	44018035	44018541	0.31	[{'connected_gene': 'ENSG00000244953', 'score': 6.54}, {'connected_gene': 'GC11P043987', 'score': 0.29}, {'connected_gene': 'ACCS', 'score': 0.25}, {'connected_gene': 'ACCSL', 'score': 0.15}]
chr11	GH11I044006	44006158	44006435	0.2	[{'connected_gene': 'GC11P043987', 'score': 0.37}, {'connected_gene': 'ACCS', 'score': 0.22}, {'connected_gene': 'ACCSL', 'score': 0.17}]
chr11	GH11I044016	44016231	44016380	0.4	[{'connected_gene': 'GC11P043987', 'score': 0.31}, {'connected_gene': 'ACCS', 'score': 0.25}, {'connected_gene': 'ACCSL', 'score': 0.15}]
chr11	GH11I044005	44005311	44005460	0.63	[{'connected_gene': 'GC11P043987', 'score': 0.37}, {'connected_gene': 'ACCS', 'score': 0.21}, {'connected_gene': 'ACCSL', 'score': 0.18}]
chr11	GH11I043986	43986627	43990775	1.16	[{'connected_gene': 'GC11P043987', 'score': 550.77}, {'connected_gene': 'ENSG00000244953', 'score': 5.24}, {'connected_gene': 'ACCSL', 'score': 0.2}, {'connected_gene': 'ENSG00000254409', 'score': 0.2}, {'connected_gene': 'ACCS', 'score': 0.18}]
chr11	GH11I043984	43984873	43985675	0.74	[{'connected_gene': 'GC11P043987', 'score': 0.77}, {'connected_gene': 'ENSG00000244953', 'score': 0.28}, {'connected_gene': 'ACCSL', 'score': 0.21}, {'connected_gene': 'ENSG00000254409', 'score': 0.21}]
chr11	GH11I043936	43936699	43938685	1.1	[{'connected_gene': 'ENSG00000244953', 'score': 0.44}, {'connected_gene': 'C11orf96', 'score': 0.39}, {'connected_gene': 'ACCSL', 'score': 0.37}, {'connected_gene': 'ENSG00000254409', 'score': 0.37}]
chr11	GH11I043946	43946855	43948140	0.96	[{'connected_gene': 'ENSG00000244953', 'score': 557.71}, {'connected_gene': 'C11orf96', 'score': 11.79}, {'connected_gene': 'ALKBH3-AS1', 'score': 11.77}, {'connected_gene': 'ENSG00000254409', 'score': 11.77}, {'connected_gene': 'ALKBH3', 'score': 11.08}, {'connected_gene': 'LOC105376644', 'score': 11.08}, {'connected_gene': 'ACCSL', 'score': 0.31}, {'connected_gene': 'GC11P043987', 'score': 0.28}]
chr11	GH11I044010	44010845	44011088	0.45	[{'connected_gene': 'ENSG00000254409', 'score': 10.81}, {'connected_gene': 'ALKBH3-AS1', 'score': 10.8}, {'connected_gene': 'C11orf96', 'score': 1.47}, {'connected_gene': 'GC11P043987', 'score': 0.34}, {'connected_gene': 'ACCS', 'score': 0.23}, {'connected_gene': 'ACCSL', 'score': 0.17}]