PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367638	[[178511886, 178512020], [178514009, 178514163], [178514347, 178514635]]	[[178514055, 178514163], [178514347, 178514560]]
ENST00000521244	[[178511930, 178512020], [178514347, 178515038], [178516228, 178518024]]	None
ENST00000319387	[[178514055, 178514163], [178514347, 178515038], [178516228, 178518024]]	[[178514055, 178514163], [178514347, 178514560]]
NR_033186	[[178511930, 178512020], [178514347, 178515038], [178516228, 178518024]]	None

Promoter

Chrom	Start	End	Description
chr1	178511876	178511946	CAGE_peak_1_at_C1orf220_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I178789	178789797	178790134	0.42	[{'connected_gene': 'FAM20B', 'score': 10.95}, {'connected_gene': 'C1orf220', 'score': 10.39}, {'connected_gene': 'ANGPTL1', 'score': 5.65}, {'connected_gene': 'GC01M178803', 'score': 0.37}, {'connected_gene': 'ENSG00000201791', 'score': 0.28}, {'connected_gene': 'GC01M178756', 'score': 0.28}, {'connected_gene': 'RALGPS2', 'score': 0.21}]
chr1	GH01I178790	178790635	178804476	0.6	[{'connected_gene': 'ANGPTL1', 'score': 18.89}, {'connected_gene': 'FAM20B', 'score': 10.96}, {'connected_gene': 'C1orf220', 'score': 10.9}, {'connected_gene': 'CLEC20A', 'score': 4.81}, {'connected_gene': 'CRYZL2P', 'score': 4.78}, {'connected_gene': 'RALGPS2', 'score': 4.31}, {'connected_gene': 'GC01M178803', 'score': 0.44}, {'connected_gene': 'ENSG00000201791', 'score': 0.26}, {'connected_gene': 'GC01M178756', 'score': 0.26}]
chr1	GH01I178897	178897062	178903769	0.38	[{'connected_gene': 'ANGPTL1', 'score': 18.64}, {'connected_gene': 'C1orf220', 'score': 9.92}, {'connected_gene': 'CRYZL2P', 'score': 4.85}, {'connected_gene': 'RALGPS2', 'score': 4.25}, {'connected_gene': 'LOC102724754', 'score': 0.28}]
chr1	GH01I178766	178766015	178773716	0.69	[{'connected_gene': 'ANGPTL1', 'score': 16.58}, {'connected_gene': 'C1orf220', 'score': 11.33}, {'connected_gene': 'CRYZL2P', 'score': 4.72}, {'connected_gene': 'RALGPS2', 'score': 4.66}, {'connected_gene': 'ENSG00000201791', 'score': 0.37}, {'connected_gene': 'GC01M178756', 'score': 0.37}, {'connected_gene': 'GC01M178803', 'score': 0.28}]
chr1	GH01I178822	178822686	178827279	0.31	[{'connected_gene': 'ANGPTL1', 'score': 17.19}, {'connected_gene': 'C1orf220', 'score': 10.29}, {'connected_gene': 'GC01M178803', 'score': 0.37}, {'connected_gene': 'RALGPS2', 'score': 0.15}]
chr1	GH01I178904	178904741	178908751	0.2	[{'connected_gene': 'ANGPTL1', 'score': 18.25}, {'connected_gene': 'C1orf220', 'score': 9.91}, {'connected_gene': 'ENSG00000273062', 'score': 6.9}, {'connected_gene': 'LOC102724754', 'score': 0.29}, {'connected_gene': 'RALGPS2', 'score': 0.09}]
chr1	GH01I178588	178588104	178589809	0.38	[{'connected_gene': 'TEX35', 'score': 7.95}, {'connected_gene': 'RALGPS2', 'score': 7.83}, {'connected_gene': 'C1orf220', 'score': 6.56}, {'connected_gene': 'LOC105371632', 'score': 0.44}, {'connected_gene': 'GC01P178598', 'score': 0.44}]
chr1	GH01I178618	178618313	178620652	0.43	[{'connected_gene': 'TEX35', 'score': 11.93}, {'connected_gene': 'RALGPS2', 'score': 8.81}, {'connected_gene': 'CLEC20A', 'score': 5.37}, {'connected_gene': 'C1orf220', 'score': 4.83}, {'connected_gene': 'GC01P178598', 'score': 0.34}, {'connected_gene': 'GC01M178650', 'score': 0.29}]
chr1	GH01I178560	178560209	178569337	0.74	[{'connected_gene': 'TEX35', 'score': 14.69}, {'connected_gene': 'C1orf220', 'score': 11.82}, {'connected_gene': 'ENSG00000201791', 'score': 11.02}, {'connected_gene': 'CLEC20A', 'score': 5.34}, {'connected_gene': 'RALGPS2', 'score': 4.99}, {'connected_gene': 'CRYZL2P', 'score': 3.94}, {'connected_gene': 'RNA5SP69', 'score': 0.77}, {'connected_gene': 'GC01P178561', 'score': 0.77}, {'connected_gene': 'GC01P178569', 'score': 0.77}, {'connected_gene': 'LOC105371632', 'score': 0.37}]
chr1	GH01I178592	178592874	178595307	0.2	[{'connected_gene': 'TEX35', 'score': 14.01}, {'connected_gene': 'C1orf220', 'score': 8.18}, {'connected_gene': 'GC01P178598', 'score': 0.77}, {'connected_gene': 'LOC105371632', 'score': 0.39}]
chr1	GH01I178536	178536310	178539614	1.05	[{'connected_gene': 'TEX35', 'score': 14.14}, {'connected_gene': 'C1orf220', 'score': 5.51}, {'connected_gene': 'GC01M178539', 'score': 0.77}, {'connected_gene': 'LOC105371631', 'score': 0.44}]
chr1	GH01I178549	178549280	178553745	0.77	[{'connected_gene': 'TEX35', 'score': 14.73}, {'connected_gene': 'CLEC20A', 'score': 9.95}, {'connected_gene': 'FAM20B', 'score': 9.92}, {'connected_gene': 'RALGPS2', 'score': 4.79}, {'connected_gene': 'GC01P178561', 'score': 0.44}, {'connected_gene': 'C1orf220', 'score': 0.44}]
chr1	GH01I179016	179016242	179019423	1.41	[{'connected_gene': 'TOR3A', 'score': 13.85}, {'connected_gene': 'FAM20B', 'score': 13.29}, {'connected_gene': 'C1orf220', 'score': 10.62}, {'connected_gene': 'GC01P179007', 'score': 0.39}]
chr1	GH01I179021	179021520	179022616	0.8	[{'connected_gene': 'TOR3A', 'score': 14.53}, {'connected_gene': 'C1orf220', 'score': 10.36}, {'connected_gene': 'FAM20B', 'score': 5.59}, {'connected_gene': 'GC01P179007', 'score': 0.39}]
chr1	GH01I178603	178603752	178614733	1.46	[{'connected_gene': 'RALGPS2', 'score': 25.34}, {'connected_gene': 'TEX35', 'score': 14.63}, {'connected_gene': 'C1orf220', 'score': 11.47}, {'connected_gene': 'TOR3A', 'score': 5.53}, {'connected_gene': 'GC01P178598', 'score': 0.39}, {'connected_gene': 'GC01M178650', 'score': 0.26}]
chr1	GH01I178884	178884040	178887762	0.54	[{'connected_gene': 'C1orf220', 'score': 10.1}, {'connected_gene': 'ANGPTL1', 'score': 5.47}, {'connected_gene': 'CRYZL2P', 'score': 4.98}, {'connected_gene': 'RALGPS2', 'score': 4.05}, {'connected_gene': 'LOC102724754', 'score': 0.23}]
chr1	GH01I178755	178755216	178758590	0.38	[{'connected_gene': 'C1orf220', 'score': 11.2}, {'connected_gene': 'ENSG00000273062', 'score': 7.39}, {'connected_gene': 'ANGPTL1', 'score': 5.13}, {'connected_gene': 'ENSG00000201791', 'score': 0.77}, {'connected_gene': 'GC01M178756', 'score': 0.77}, {'connected_gene': 'RALGPS2', 'score': 0.29}, {'connected_gene': 'GC01M178803', 'score': 0.25}]
chr1	GH01I178540	178540203	178545793	1.94	[{'connected_gene': 'C1orf220', 'score': 556.56}, {'connected_gene': 'GC01M178539', 'score': 550.77}, {'connected_gene': 'TEX35', 'score': 16.43}, {'connected_gene': 'RALGPS2', 'score': 4.96}, {'connected_gene': 'GC01P178561', 'score': 0.37}]
chr1	GH01I179002	179002294	179004756	1.09	[{'connected_gene': 'C1orf220', 'score': 11.79}, {'connected_gene': 'TOR3A', 'score': 11.49}, {'connected_gene': 'FAM20B', 'score': 4.77}, {'connected_gene': 'GC01P179007', 'score': 0.77}, {'connected_gene': 'LOC102724754', 'score': 0.21}]
chr1	GH01I178642	178642973	178647325	0.93	[{'connected_gene': 'C1orf220', 'score': 10.65}, {'connected_gene': 'RALGPS2', 'score': 6.98}, {'connected_gene': 'CLEC20A', 'score': 4.77}, {'connected_gene': 'GC01M178650', 'score': 0.44}, {'connected_gene': 'GC01P178598', 'score': 0.25}]
chr1	GH01I178632	178632108	178635172	0.63	[{'connected_gene': 'C1orf220', 'score': 15.0}, {'connected_gene': 'RALGPS2', 'score': 8.7}, {'connected_gene': 'GC01M178650', 'score': 0.37}, {'connected_gene': 'GC01P178598', 'score': 0.29}]
chr1	GH01I178322	178322726	178324058	0.31	[{'connected_gene': 'C1orf220', 'score': 9.94}, {'connected_gene': 'CLEC20A', 'score': 9.71}, {'connected_gene': 'RASAL2', 'score': 7.66}, {'connected_gene': 'CRYZL2P', 'score': 4.57}, {'connected_gene': 'LOC105371629', 'score': 0.37}, {'connected_gene': 'ENSG00000270575', 'score': 0.13}]
chr1	GH01I178324	178324066	178324215	0.38	[{'connected_gene': 'C1orf220', 'score': 9.94}, {'connected_gene': 'CLEC20A', 'score': 9.71}, {'connected_gene': 'LOC105371629', 'score': 0.37}, {'connected_gene': 'ENSG00000270575', 'score': 0.13}, {'connected_gene': 'RASAL2', 'score': 0.07}]
chr1	GH01I178279	178279401	178279600	0.2	[{'connected_gene': 'C1orf220', 'score': 4.21}, {'connected_gene': 'LOC105371629', 'score': 0.21}, {'connected_gene': 'ENSG00000270575', 'score': 0.18}, {'connected_gene': 'RASAL2', 'score': 0.09}]
chr1	GH01I178655	178655846	178655995	0.69	[{'connected_gene': 'C1orf220', 'score': 10.34}, {'connected_gene': 'ENSG00000273384', 'score': 0.77}, {'connected_gene': 'MIR4424', 'score': 0.34}]
chr1	GH01I178299	178299606	178300762	0.87	[{'connected_gene': 'CLEC20A', 'score': 11.51}, {'connected_gene': 'C1orf220', 'score': 10.51}, {'connected_gene': 'RASAL2', 'score': 7.9}, {'connected_gene': 'CRYZL2P', 'score': 4.57}, {'connected_gene': 'LOC105371629', 'score': 0.26}, {'connected_gene': 'ENSG00000270575', 'score': 0.14}]
chr1	GH01I178310	178310746	178310995	0.77	[{'connected_gene': 'CLEC20A', 'score': 10.75}, {'connected_gene': 'C1orf220', 'score': 10.33}, {'connected_gene': 'LOC105371629', 'score': 0.29}, {'connected_gene': 'ENSG00000270575', 'score': 0.13}, {'connected_gene': 'RASAL2', 'score': 0.08}]
chr1	GH01I178311	178311000	178311200	0.69	[{'connected_gene': 'CLEC20A', 'score': 10.75}, {'connected_gene': 'C1orf220', 'score': 10.33}, {'connected_gene': 'LOC105371629', 'score': 0.29}, {'connected_gene': 'ENSG00000270575', 'score': 0.13}, {'connected_gene': 'RASAL2', 'score': 0.08}]
chr1	GH01I178580	178580643	178582331	1.05	[{'connected_gene': 'LOC105371632', 'score': 550.77}, {'connected_gene': 'TEX35', 'score': 14.66}, {'connected_gene': 'C1orf220', 'score': 11.43}, {'connected_gene': 'RALGPS2', 'score': 10.08}, {'connected_gene': 'GC01P178598', 'score': 0.37}]
chr1	GH01I178598	178598429	178600778	0.38	[{'connected_gene': 'GC01P178598', 'score': 550.77}, {'connected_gene': 'TEX35', 'score': 15.62}, {'connected_gene': 'C1orf220', 'score': 15.26}, {'connected_gene': 'RALGPS2', 'score': 5.06}, {'connected_gene': 'GC01M178650', 'score': 0.23}]
chr1	GH01I178574	178574392	178574857	0.74	[{'connected_gene': 'GC01M178575', 'score': 550.77}, {'connected_gene': 'TEX35', 'score': 14.67}, {'connected_gene': 'C1orf220', 'score': 11.77}, {'connected_gene': 'ENSG00000201791', 'score': 11.03}, {'connected_gene': 'LOC105371632', 'score': 0.44}, {'connected_gene': 'GC01P178569', 'score': 0.44}]
chr1	GH01I178650	178650566	178653916	0.76	[{'connected_gene': 'GC01M178650', 'score': 550.77}, {'connected_gene': 'ENSG00000273384', 'score': 550.77}, {'connected_gene': 'RALGPS2', 'score': 13.02}, {'connected_gene': 'C1orf220', 'score': 11.01}, {'connected_gene': 'ANGPTL1', 'score': 4.35}, {'connected_gene': 'MIR4424', 'score': 0.31}]
chr1	GH01I178575	178575332	178576675	0.94	[{'connected_gene': 'GC01M178575', 'score': 550.77}, {'connected_gene': 'C1orf220', 'score': 18.11}, {'connected_gene': 'TEX35', 'score': 14.11}, {'connected_gene': 'ENSG00000201791', 'score': 11.03}, {'connected_gene': 'LOC105371632', 'score': 0.77}, {'connected_gene': 'GC01P178569', 'score': 0.44}]