PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000316300	[[160952514, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085291]]	[[160952760, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085246]]
ENST00000447678	[[160952514, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085298], [161087338, 161087407]]	[[160952760, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085246]]
NM_005577	[[160952514, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085291], [161087332, 161087407]]	[[160952760, 160952922], [160953562, 160953681], [160958886, 160958993], [160961074, 160961215], [160962138, 160962213], [160963719, 160963840], [160966471, 160966565], [160968820, 160968969], [160969509, 160969691], [160977056, 160977216], [160978421, 160978603], [160998167, 160998327], [160999554, 160999736], [161006077, 161006237], [161007480, 161007662], [161010584, 161010744], [161011975, 161012133], [161014989, 161015149], [161016385, 161016567], [161020531, 161020691], [161021948, 161022130], [161026077, 161026237], [161027508, 161027690], [161032593, 161032753], [161033963, 161034145], [161038148, 161038308], [161039515, 161039697], [161043694, 161043854], [161045061, 161045243], [161049238, 161049398], [161050605, 161050787], [161054784, 161054944], [161056154, 161056336], [161060331, 161060491], [161061698, 161061880], [161065878, 161066038], [161067245, 161067427], [161071369, 161071529], [161085197, 161085246]]

Promoter

Chrom	Start	End	Description
chr6	161085303	161085308	CAGE_peak_1_at_LPA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I160519	160519401	160521238	1.17	[{'connected_gene': 'LPAL2', 'score': 557.07}, {'connected_gene': 'WTAP', 'score': 16.96}, {'connected_gene': 'LOC729603', 'score': 11.2}, {'connected_gene': 'MAP3K4', 'score': 10.19}, {'connected_gene': 'LPA', 'score': 0.11}]
chr6	GH06I160534	160534001	160534458	0.92	[{'connected_gene': 'LPAL2', 'score': 0.39}, {'connected_gene': 'LPA', 'score': 0.12}]
chr6	GH06I160278	160278914	160279302	0.22	[{'connected_gene': 'SLC22A2', 'score': 550.77}, {'connected_gene': 'LPA', 'score': 1.74}, {'connected_gene': 'SLC22A3', 'score': 0.2}]
chr6	GH06I160664	160664217	160664276	0.68	[{'connected_gene': 'LPA', 'score': 550.77}, {'connected_gene': 'GC06M160605', 'score': 0.37}, {'connected_gene': 'LPAL2', 'score': 0.11}]
chr6	GH06I160761	160761976	160762303	0.33	[{'connected_gene': 'LPA', 'score': 4.91}, {'connected_gene': 'ENSG00000276960', 'score': 0.77}, {'connected_gene': 'ENSG00000274903', 'score': 0.39}]