Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000358595 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
ENST00000471844 [[150782569, 150784586], [150785647, 150785814], [150786552, 150786588], [150790403, 150790506], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849181]] [[150790497, 150790506], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
ENST00000354396 [[150783334, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788876], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849055]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788876], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
ENST00000515192 [[150784156, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802441], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150833722, 150833778], [150849018, 150849184]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802441], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830934]]
ENST00000505755 [[150784436, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849085]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
ENST00000510273 [[150789869, 150789909], [150790395, 150790917]] None
ENST00000478972 [[150801585, 150801703], [150802379, 150802858]] None
ENST00000512296 [[150802384, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807339]] None
ENST00000468970 [[150803961, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808975]] None
ENST00000497108 [[150808899, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825316], [150830824, 150830936], [150849018, 150849044]] None
ENST00000505979 [[150811874, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849085]] None
ENST00000504358 [[150812083, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150825631, 150825754], [150830824, 150830936], [150849018, 150849172]] [[150825723, 150825754], [150830824, 150830936], [150849018, 150849043]]
NM_001286035 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802441], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150833722, 150833778], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802441], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830934]]
NM_001668 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
NM_001286036 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788876], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788876], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150814899, 150814944], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
NM_178427 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786715], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
NM_001197325 [[150782180, 150784586], [150785647, 150785814], [150786552, 150786712], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849244]] [[150784496, 150784586], [150785647, 150785814], [150786552, 150786712], [150788734, 150788882], [150789263, 150789366], [150789557, 150789678], [150789836, 150789909], [150790395, 150790506], [150795669, 150795821], [150799018, 150799093], [150801568, 150801703], [150802379, 150802456], [150804293, 150804379], [150804809, 150804875], [150807013, 150807116], [150808755, 150808969], [150811916, 150812130], [150818738, 150818783], [150825237, 150825282], [150830824, 150830936], [150849018, 150849043]]
Promoter
Chrom Start End Description
chr1 150849047 150849082 CAGE_peak_1_at_ARNT_5end
chr1 150849174 150849200 CAGE_peak_2_at_ARNT_5end
chr1 150849208 150849217 CAGE_peak_3_at_ARNT_5end