PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000315099	[[93733212, 93734126], [93747210, 93747454]]	[[93733228, 93734113]]
NM_001001850	[[93733212, 93734126], [93747210, 93747454]]	[[93733228, 93734113]]

Promoter

Chrom	Start	End	Description
chr3	93747425	93747450	CAGE_peak_1_at_STX19_5end
chr3	93747459	93747476	CAGE_peak_2_at_STX19_5end
chr3	93747492	93747502	CAGE_peak_3_at_STX19_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I094332	94332174	94334985	0.63	[{'connected_gene': 'STX19', 'score': 8.21}, {'connected_gene': 'PROS1', 'score': 3.77}, {'connected_gene': 'GC03P094366', 'score': 0.29}, {'connected_gene': 'GC03M094207', 'score': 0.2}]
chr3	GH03I094412	94412448	94414285	0.43	[{'connected_gene': 'STX19', 'score': 7.06}, {'connected_gene': 'GC03P094387', 'score': 0.31}, {'connected_gene': 'ARMC10P1', 'score': 0.16}]
chr3	GH03I094028	94028557	94028686	1.06	[{'connected_gene': 'STX19', 'score': 550.77}, {'connected_gene': 'HMGN1P7', 'score': 0.28}, {'connected_gene': 'ARL13B', 'score': 0.25}]
chr3	GH03I094061	94061883	94064813	2.03	[{'connected_gene': 'DHFR2', 'score': 554.31}, {'connected_gene': 'NSUN3', 'score': 550.77}, {'connected_gene': 'STX19', 'score': 8.35}]
chr3	GH03I094004	94004189	94004800	0.89	[{'connected_gene': 'DHFR2', 'score': 11.54}, {'connected_gene': 'NSUN3', 'score': 11.54}, {'connected_gene': 'HMGN1P7', 'score': 0.37}, {'connected_gene': 'STX19', 'score': 0.34}, {'connected_gene': 'ARL13B', 'score': 0.34}]
chr3	GH03I093843	93843349	93845018	0.79	[{'connected_gene': 'RNU6-488P', 'score': 550.77}, {'connected_gene': 'STX19', 'score': 11.57}, {'connected_gene': 'PROS1', 'score': 4.16}, {'connected_gene': 'PIR37198', 'score': 0.31}]