PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000227918	[[62037626, 62037743], [62038352, 62038540], [62040428, 62040628]]	[[62037688, 62037743], [62038352, 62038540], [62040428, 62040467]]
ENST00000525380	[[62037629, 62037743], [62038352, 62039543]]	[[62037688, 62037743], [62038352, 62038660]]
NM_002411	[[62037626, 62037743], [62038352, 62038540], [62040428, 62040632]]	[[62037688, 62037743], [62038352, 62038540], [62040428, 62040467]]

Promoter

Chrom	Start	End	Description
chr11	62037622	62037637	CAGE_peak_1_at_SCGB2A2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I062041	62041386	62049469	1.27	[{'connected_gene': 'CSKMT', 'score': 86.38}, {'connected_gene': 'CPSF7', 'score': 81.91}, {'connected_gene': 'SNHG1', 'score': 78.64}, {'connected_gene': 'GANAB', 'score': 63.72}, {'connected_gene': 'NXF1', 'score': 59.2}, {'connected_gene': 'LOC105369332', 'score': 58.24}, {'connected_gene': 'TMEM138', 'score': 54.15}, {'connected_gene': 'TUT1', 'score': 53.67}, {'connected_gene': 'MTA2', 'score': 46.62}, {'connected_gene': 'INTS5', 'score': 44.98}, {'connected_gene': 'EML3', 'score': 41.73}, {'connected_gene': 'STX5', 'score': 41.7}, {'connected_gene': 'RN7SL23P', 'score': 34.15}, {'connected_gene': 'TAF6L', 'score': 31.74}, {'connected_gene': 'ENSG00000267811', 'score': 24.14}, {'connected_gene': 'WDR74', 'score': 21.39}, {'connected_gene': 'VPS37C', 'score': 20.51}, {'connected_gene': 'LBHD1', 'score': 14.59}, {'connected_gene': 'LRRN4CL', 'score': 11.94}, {'connected_gene': 'ZBTB3', 'score': 11.01}, {'connected_gene': 'UBXN1', 'score': 10.92}, {'connected_gene': 'UQCC3', 'score': 10.78}, {'connected_gene': 'TMEM216', 'score': 10.69}, {'connected_gene': 'TMEM179B', 'score': 10.28}, {'connected_gene': 'AHNAK', 'score': 10.11}, {'connected_gene': 'ENSG00000269176', 'score': 9.76}, {'connected_gene': 'GNG3', 'score': 9.69}, {'connected_gene': 'BEST1', 'score': 9.25}, {'connected_gene': 'RAB3IL1', 'score': 6.94}, {'connected_gene': 'SCGB2A2', 'score': 5.85}, {'connected_gene': 'INCENP', 'score': 5.22}, {'connected_gene': 'GC11P062053', 'score': 0.44}, {'connected_gene': 'RPS2P37', 'score': 0.29}]
chr11	GH11I062270	62270109	62270168	0.61	[{'connected_gene': 'SCGB2A2', 'score': 550.77}, {'connected_gene': 'SCGB2A1', 'score': 4.71}, {'connected_gene': 'SCGB1D4', 'score': 0.31}]
chr11	GH11I062325	62325009	62325158	0.76	[{'connected_gene': 'SCGB2A2', 'score': 11.02}, {'connected_gene': 'NPM1P35', 'score': 0.44}, {'connected_gene': 'SCGB1D4', 'score': 0.31}]
chr11	GH11I062242	62242169	62242318	1.3	[{'connected_gene': 'SCGB1D2', 'score': 550.77}, {'connected_gene': 'SCGB2A2', 'score': 11.89}, {'connected_gene': 'ASRGL1', 'score': 10.56}, {'connected_gene': 'ENSG00000255126', 'score': 10.51}, {'connected_gene': 'SCGB1A1', 'score': 10.51}, {'connected_gene': 'ENSG00000254404', 'score': 0.37}]