PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000389594	[[66953071, 66953270], [66953374, 66953527], [66954877, 66954974], [66955704, 66955755], [66957459, 66957537], [66957738, 66957822], [66958324, 66958403], [66958770, 66958912], [66964826, 66964885], [66965070, 66965270]]	None
ENST00000359454	[[66953088, 66953270], [66953374, 66953527], [66954877, 66954974], [66955704, 66955755], [66957459, 66957537], [66958324, 66958403], [66958770, 66958912], [66963544, 66963585], [66964826, 66964885], [66965070, 66965271]]	None
ENST00000411796	[[66953108, 66953270], [66953374, 66953527], [66954877, 66954974], [66955704, 66955755], [66957459, 66957537], [66958343, 66958403], [66958770, 66958912], [66959529, 66959618], [66963544, 66963585], [66964826, 66964885], [66965070, 66965270]]	None
ENST00000450299	[[66953124, 66953270], [66954877, 66954974], [66955704, 66955755], [66957459, 66957537], [66958343, 66958403], [66958770, 66958912], [66963544, 66963585], [66964826, 66964885], [66965070, 66965118]]	None
ENST00000432289	[[66953384, 66953527], [66954877, 66954974], [66963544, 66963585], [66964826, 66964885], [66965070, 66965271]]	None
ENST00000436570	[[66963400, 66963585], [66964826, 66964885], [66965070, 66965271]]	None

Promoter

Chrom	Start	End	Description
chr14	66953098	66953109	CAGE_peak_2_at_LINC00238_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I066444	66444451	66445087	0.2	[{'connected_gene': 'ATP6V1D', 'score': 11.82}, {'connected_gene': 'CCDC196', 'score': 0.29}, {'connected_gene': 'GPHN', 'score': 0.21}, {'connected_gene': 'ENSG00000258561', 'score': 0.21}]
chr14	GH14I066379	66379183	66379332	0.43	[{'connected_gene': 'ATP6V1D', 'score': 11.72}, {'connected_gene': 'CCDC196', 'score': 0.29}, {'connected_gene': 'ENSG00000258561', 'score': 0.12}, {'connected_gene': 'GC14P066230', 'score': 0.11}]
chr14	GH14I066483	66483483	66483632	0.67	[{'connected_gene': 'ATP6V1D', 'score': 12.6}, {'connected_gene': 'GPHN', 'score': 12.27}, {'connected_gene': 'ENSG00000258561', 'score': 0.31}, {'connected_gene': 'CCDC196', 'score': 0.19}]
chr14	GH14I066359	66359543	66359692	0.6	[{'connected_gene': 'CCDC196', 'score': 0.23}, {'connected_gene': 'GC14P066230', 'score': 0.13}, {'connected_gene': 'ENSG00000258561', 'score': 0.11}]
chr14	GH14I066395	66395423	66395552	0.46	[{'connected_gene': 'GPHN', 'score': 9.61}, {'connected_gene': 'CCDC196', 'score': 0.37}, {'connected_gene': 'ENSG00000258561', 'score': 0.14}, {'connected_gene': 'GC14P066230', 'score': 0.1}]
chr14	GH14I066389	66389850	66390100	0.22	[{'connected_gene': 'GPHN', 'score': 2.49}, {'connected_gene': 'CCDC196', 'score': 0.34}, {'connected_gene': 'ENSG00000258561', 'score': 0.13}, {'connected_gene': 'GC14P066230', 'score': 0.1}]
chr14	GH14I066503	66503563	66503712	0.57	[{'connected_gene': 'GPHN', 'score': 0.77}, {'connected_gene': 'ENSG00000258561', 'score': 0.44}, {'connected_gene': 'CCDC196', 'score': 0.16}]
chr14	GH14I066495	66495603	66495752	0.67	[{'connected_gene': 'GPHN', 'score': 0.39}, {'connected_gene': 'ENSG00000258561', 'score': 0.39}, {'connected_gene': 'CCDC196', 'score': 0.18}]