PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_001244752	[[33524410, 33524693], [33528724, 33528839], [33528997, 33529171], [33533436, 33533543], [33534367, 33534505], [33536875, 33536943], [33541144, 33541225], [33543182, 33543253], [33547935, 33548853], [33550427, 33550577], [33555705, 33555818], [33558055, 33558185], [33566216, 33566498], [33567100, 33567312], [33568668, 33568891], [33572313, 33573001]]	[[33524487, 33524693], [33528724, 33528839], [33528997, 33529171], [33533436, 33533543], [33534367, 33534505], [33536875, 33536943], [33541144, 33541225], [33543182, 33543253], [33547935, 33548853], [33550427, 33550577], [33555705, 33555818], [33558055, 33558185], [33566216, 33566498], [33567100, 33567312], [33568668, 33568891], [33572313, 33572358]]

Promoter

Chrom	Start	End	Description
chr9	33524240	33524258	CAGE_peak_1_at_ANKRD18B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I033472	33472114	33475000	2.26	[{'connected_gene': 'NOL6', 'score': 662.79}, {'connected_gene': 'NFX1', 'score': 135.98}, {'connected_gene': 'TOPORS', 'score': 135.28}, {'connected_gene': 'ASS1P12', 'score': 111.06}, {'connected_gene': 'SMU1', 'score': 109.34}, {'connected_gene': 'TCEA1P4', 'score': 90.52}, {'connected_gene': 'ENSG00000228352', 'score': 67.23}, {'connected_gene': 'DFFBP1', 'score': 63.58}, {'connected_gene': 'ENSG00000223440', 'score': 55.62}, {'connected_gene': 'UBAP2', 'score': 47.15}, {'connected_gene': 'SUGT1P1', 'score': 25.61}, {'connected_gene': 'LAGE3P1', 'score': 20.95}, {'connected_gene': 'APTX', 'score': 18.57}, {'connected_gene': 'DDX58', 'score': 11.89}, {'connected_gene': 'ANKRD18B', 'score': 10.54}, {'connected_gene': 'ENSG00000260947', 'score': 10.38}, {'connected_gene': 'B4GALT1', 'score': 10.06}, {'connected_gene': 'CHMP5', 'score': 9.96}, {'connected_gene': 'AQP7', 'score': 5.31}, {'connected_gene': 'MIR6851', 'score': 0.44}]
chr9	GH09I033505	33505947	33508272	0.98	[{'connected_gene': 'NOL6', 'score': 19.17}, {'connected_gene': 'AQP3', 'score': 10.52}, {'connected_gene': 'ANKRD18B', 'score': 9.39}, {'connected_gene': 'SUGT1P1', 'score': 0.77}, {'connected_gene': 'PIR50034', 'score': 0.77}]
chr9	GH09I033523	33523257	33525201	1.9	[{'connected_gene': 'ANKRD18B', 'score': 562.74}, {'connected_gene': 'PIR41298', 'score': 550.77}, {'connected_gene': 'GC09P033525', 'score': 550.77}, {'connected_gene': 'AQP3', 'score': 12.17}, {'connected_gene': 'NOL6', 'score': 11.03}, {'connected_gene': 'APTX', 'score': 10.3}, {'connected_gene': 'CYP4F26P', 'score': 9.53}, {'connected_gene': 'ENSG00000228072', 'score': 0.44}]
chr9	GH09I033510	33510081	33512024	1.42	[{'connected_gene': 'SUGT1P1', 'score': 550.77}, {'connected_gene': 'VN1R47P', 'score': 550.77}, {'connected_gene': 'PIR50034', 'score': 550.77}, {'connected_gene': 'ANKRD18B', 'score': 12.51}, {'connected_gene': 'PRSS3', 'score': 5.63}]
chr9	GH09I033518	33518283	33518432	0.46	[{'connected_gene': 'AQP3', 'score': 5.69}, {'connected_gene': 'ENSG00000228072', 'score': 0.77}, {'connected_gene': 'ANKRD18B', 'score': 0.44}]
chr9	GH09I033461	33461554	33462665	0.38	[{'connected_gene': 'AQP3', 'score': 13.84}, {'connected_gene': 'AQP7', 'score': 11.59}, {'connected_gene': 'LOC105376020', 'score': 11.57}, {'connected_gene': 'BAG1', 'score': 9.69}, {'connected_gene': 'CHMP5', 'score': 9.69}, {'connected_gene': 'ANKRD18B', 'score': 9.11}, {'connected_gene': 'CYP4F26P', 'score': 4.57}, {'connected_gene': 'GC09P033453', 'score': 0.44}, {'connected_gene': 'MIR6851', 'score': 0.44}, {'connected_gene': 'NOL6', 'score': 0.39}]
chr9	GH09I033517	33517600	33517800	0.59	[{'connected_gene': 'CYP4F26P', 'score': 10.8}, {'connected_gene': 'AQP3', 'score': 5.82}, {'connected_gene': 'ENSG00000228072', 'score': 0.77}, {'connected_gene': 'ANKRD18B', 'score': 0.44}]
chr9	GH09I033526	33526001	33526200	0.31	[{'connected_gene': 'PIR41298', 'score': 550.77}, {'connected_gene': 'ANKRD18B', 'score': 550.77}, {'connected_gene': 'GC09P033525', 'score': 550.77}, {'connected_gene': 'PIR60351', 'score': 0.34}]
chr9	GH09I033452	33452423	33454974	1.25	[{'connected_gene': 'GC09P033453', 'score': 550.77}, {'connected_gene': 'AQP3', 'score': 14.64}, {'connected_gene': 'NOL6', 'score': 12.76}, {'connected_gene': 'ANKRD18B', 'score': 8.94}, {'connected_gene': 'CYP4F26P', 'score': 5.95}, {'connected_gene': 'PTENP1', 'score': 5.26}, {'connected_gene': 'MIR6851', 'score': 0.39}]