PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000441065	[[112668531, 112668609], [112670394, 112670523], [112670805, 112672498]]	[[112670910, 112671702]]
NM_001013734	[[112668531, 112668609], [112670394, 112670523], [112670805, 112672498]]	[[112670910, 112671702]]

Promoter

Chrom	Start	End	Description
chr6	112668524	112668534	CAGE_peak_1_at_RFPL4B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I112228	112228361	112229127	0.57	[{'connected_gene': 'RFPL4B', 'score': 6.15}, {'connected_gene': 'LAMA4', 'score': 4.79}, {'connected_gene': 'ENSG00000270661', 'score': 0.44}, {'connected_gene': 'ENSG00000271208', 'score': 0.44}]
chr6	GH06I112347	112347281	112347340	0.94	[{'connected_gene': 'RFPL4B', 'score': 550.77}, {'connected_gene': 'GC06M112338', 'score': 0.44}, {'connected_gene': 'ENSG00000281613', 'score': 0.14}]
chr6	GH06I112220	112220955	112226920	1.1	[{'connected_gene': 'LAMA4', 'score': 17.15}, {'connected_gene': 'MFSD4B', 'score': 14.88}, {'connected_gene': 'RNU6-1226P', 'score': 12.02}, {'connected_gene': 'ENSG00000220506', 'score': 11.66}, {'connected_gene': 'BRD7P4', 'score': 10.78}, {'connected_gene': 'FCF1P5', 'score': 10.5}, {'connected_gene': 'LOC100128588', 'score': 10.26}, {'connected_gene': 'ENSG00000272356', 'score': 9.96}, {'connected_gene': 'RFPL4B', 'score': 5.05}, {'connected_gene': 'ENSG00000270661', 'score': 0.77}, {'connected_gene': 'ENSG00000271208', 'score': 0.39}]
chr6	GH06I112257	112257976	112260270	0.2	[{'connected_gene': 'RNU6-1226P', 'score': 10.76}, {'connected_gene': 'LOC100128588', 'score': 10.16}, {'connected_gene': 'LAMA4', 'score': 7.03}, {'connected_gene': 'RFPL4B', 'score': 4.24}, {'connected_gene': 'ENSG00000226440', 'score': 0.34}, {'connected_gene': 'ENSG00000281613', 'score': 0.34}, {'connected_gene': 'LOC101927640', 'score': 0.34}, {'connected_gene': 'GC06M112326', 'score': 0.2}]