PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000274813	[[49398072, 49399569], [49403168, 49403336], [49407918, 49408066], [49409552, 49409684], [49412351, 49412467], [49415382, 49415498], [49416528, 49416640], [49419178, 49419427], [49421297, 49421469], [49423792, 49423950], [49425403, 49425771], [49426794, 49427218], [49430815, 49430904]]	[[49399440, 49399569], [49403168, 49403336], [49407918, 49408066], [49409552, 49409684], [49412351, 49412467], [49415382, 49415498], [49416528, 49416640], [49419178, 49419427], [49421297, 49421469], [49423792, 49423950], [49425403, 49425771], [49426794, 49427179]]
NM_000255	[[49398072, 49399569], [49403168, 49403336], [49407918, 49408066], [49409552, 49409684], [49412351, 49412467], [49415382, 49415498], [49416528, 49416640], [49419178, 49419427], [49421297, 49421469], [49423792, 49423950], [49425403, 49425771], [49426794, 49427218], [49430815, 49431041]]	[[49399440, 49399569], [49403168, 49403336], [49407918, 49408066], [49409552, 49409684], [49412351, 49412467], [49415382, 49415498], [49416528, 49416640], [49419178, 49419427], [49421297, 49421469], [49423792, 49423950], [49425403, 49425771], [49426794, 49427179]]

Promoter

Chrom	Start	End	Description
chr6	49430856	49430871	CAGE_peak_3_at_MUT_5end
chr6	49430886	49430988	CAGE_peak_1_at_MUT_5end
chr6	49431002	49431027	CAGE_peak_2_at_MUT_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I049555	49555607	49557565	1.38	[{'connected_gene': 'CENPQ', 'score': 12.81}, {'connected_gene': 'PGK2', 'score': 9.9}, {'connected_gene': 'LOC101927020', 'score': 9.35}, {'connected_gene': 'LOC101927048', 'score': 9.35}, {'connected_gene': 'MUT', 'score': 7.51}, {'connected_gene': 'C6orf141', 'score': 0.44}, {'connected_gene': 'CYP2AC1P', 'score': 0.34}]
chr6	GH06I049325	49325521	49327694	0.69	[{'connected_gene': 'MUT', 'score': 20.21}, {'connected_gene': 'CENPQ', 'score': 6.0}, {'connected_gene': 'RNU7-65P', 'score': 0.37}, {'connected_gene': 'ENSG00000217631', 'score': 0.23}]
chr6	GH06I049461	49461880	49464401	2.08	[{'connected_gene': 'MUT', 'score': 589.43}, {'connected_gene': 'CENPQ', 'score': 550.77}, {'connected_gene': 'GC06P049407', 'score': 0.22}]
chr6	GH06I049523	49523003	49524274	0.94	[{'connected_gene': 'MUT', 'score': 15.98}, {'connected_gene': 'GLYATL3', 'score': 11.92}, {'connected_gene': 'LOC101927020', 'score': 10.07}, {'connected_gene': 'LOC101927048', 'score': 10.06}, {'connected_gene': 'CENPQ', 'score': 6.3}, {'connected_gene': 'GC06P049517', 'score': 0.44}, {'connected_gene': 'GC06M049537', 'score': 0.39}]
chr6	GH06I048729	48729743	48730111	0.24	[{'connected_gene': 'MUT', 'score': 5.19}, {'connected_gene': 'ENSG00000278736', 'score': 0.31}, {'connected_gene': 'PIR62700', 'score': 0.25}]
chr6	GH06I048999	48999785	49000154	0.22	[{'connected_gene': 'MUT', 'score': 1.75}, {'connected_gene': 'GC06M048966', 'score': 0.44}, {'connected_gene': 'GC06P049023', 'score': 0.34}]
chr6	GH06I048765	48765233	48767236	0.6	[{'connected_gene': 'PTCHD4', 'score': 11.0}, {'connected_gene': 'RNU1-105P', 'score': 9.91}, {'connected_gene': 'MUT', 'score': 5.56}, {'connected_gene': 'PIR62700', 'score': 0.39}, {'connected_gene': 'ENSG00000278736', 'score': 0.21}]
chr6	GH06I049908	49908630	49910356	0.38	[{'connected_gene': 'GLYATL3', 'score': 10.63}, {'connected_gene': 'MUT', 'score': 4.36}, {'connected_gene': 'GC06P049919', 'score': 0.44}, {'connected_gene': 'CRISP1', 'score': 0.29}]
chr6	GH06I049549	49549688	49555452	2.34	[{'connected_gene': 'C6orf141', 'score': 550.77}, {'connected_gene': 'MUT', 'score': 7.65}, {'connected_gene': 'CENPQ', 'score': 6.7}, {'connected_gene': 'CYP2AC1P', 'score': 0.31}]
chr6	GH06I049766	49766455	49770933	0.9	[{'connected_gene': 'LOC101927020', 'score': 19.9}, {'connected_gene': 'CRISP3', 'score': 11.78}, {'connected_gene': 'LOC101927048', 'score': 11.24}, {'connected_gene': 'MUT', 'score': 5.36}, {'connected_gene': 'CRISP2', 'score': 4.97}, {'connected_gene': 'C6orf141', 'score': 4.86}, {'connected_gene': 'PGK2', 'score': 0.37}]