PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000037502	[[171604556, 171605849], [171607736, 171607862], [171621147, 171621823]]	[[171605064, 171605849], [171607736, 171607862], [171621147, 171621751]]
NM_000261	[[171604556, 171605849], [171607736, 171607862], [171621147, 171621773]]	[[171605064, 171605849], [171607736, 171607862], [171621147, 171621751]]

Promoter

Chrom	Start	End	Description
chr1	171621815	171621835	CAGE_peak_1_at_MYOC_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I171738	171738353	171744505	2.65	[{'connected_gene': 'VAMP4', 'score': 559.28}, {'connected_gene': 'PRRC2C', 'score': 46.48}, {'connected_gene': 'METTL13', 'score': 45.97}, {'connected_gene': 'PIGC', 'score': 25.34}, {'connected_gene': 'FMO4', 'score': 11.19}, {'connected_gene': 'SUCO', 'score': 9.98}, {'connected_gene': 'MYOC', 'score': 9.56}, {'connected_gene': 'PIR43253', 'score': 0.22}]
chr1	GH01I171662	171662792	171664458	0.51	[{'connected_gene': 'PFN1P1', 'score': 0.44}, {'connected_gene': 'MYOC', 'score': 0.39}, {'connected_gene': 'GC01P171514', 'score': 0.11}]
chr1	GH01I171779	171779939	171782860	2.08	[{'connected_gene': 'METTL13', 'score': 606.02}, {'connected_gene': 'PRRC2C', 'score': 49.01}, {'connected_gene': 'PIGC', 'score': 28.13}, {'connected_gene': 'MYOC', 'score': 10.7}, {'connected_gene': 'DNM3', 'score': 5.38}, {'connected_gene': 'LOC105371614', 'score': 0.44}]
chr1	GH01I171652	171652221	171657852	1.68	[{'connected_gene': 'MYOC', 'score': 559.96}, {'connected_gene': 'VAMP4', 'score': 5.19}, {'connected_gene': 'PFN1P1', 'score': 0.37}, {'connected_gene': 'GC01P171514', 'score': 0.11}]
chr1	GH01I171744	171744801	171745446	0.79	[{'connected_gene': 'MYOC', 'score': 14.7}, {'connected_gene': 'METTL13', 'score': 11.63}, {'connected_gene': 'VAMP4', 'score': 10.18}, {'connected_gene': 'FMO4', 'score': 9.13}, {'connected_gene': 'PRRC2C', 'score': 5.08}, {'connected_gene': 'LOC100422548', 'score': 0.44}]
chr1	GH01I171440	171440933	171441921	0.77	[{'connected_gene': 'MYOC', 'score': 6.48}, {'connected_gene': 'CYCSP53', 'score': 0.77}, {'connected_gene': 'GC01M171420', 'score': 0.34}]
chr1	GH01I171673	171673782	171675703	0.31	[{'connected_gene': 'MYOC', 'score': 12.21}, {'connected_gene': 'DNM3', 'score': 6.93}, {'connected_gene': 'VAMP4', 'score': 4.39}, {'connected_gene': 'PFN1P1', 'score': 0.77}, {'connected_gene': 'RPL4P3', 'score': 0.44}, {'connected_gene': 'GC01P171514', 'score': 0.1}]
chr1	GH01I171717	171717185	171717778	0.2	[{'connected_gene': 'MYOC', 'score': 17.06}, {'connected_gene': 'PRRC2C', 'score': 10.1}, {'connected_gene': 'METTL13', 'score': 5.9}, {'connected_gene': 'VAMP4', 'score': 0.34}, {'connected_gene': 'PIR43253', 'score': 0.29}]
chr1	GH01I171467	171467718	171468994	0.8	[{'connected_gene': 'MYOC', 'score': 4.5}, {'connected_gene': 'PRRC2C', 'score': 0.37}, {'connected_gene': 'CYCSP53', 'score': 0.34}]
chr1	GH01I171641	171641035	171642256	0.54	[{'connected_gene': 'MYOC', 'score': 0.39}, {'connected_gene': 'LOC105371612', 'score': 0.26}, {'connected_gene': 'GC01P171514', 'score': 0.13}]
chr1	GH01I171799	171799423	171802628	0.67	[{'connected_gene': 'RPS15P3', 'score': 550.77}, {'connected_gene': 'METTL13', 'score': 12.58}, {'connected_gene': 'MYOC', 'score': 9.92}, {'connected_gene': 'C1orf105', 'score': 9.56}, {'connected_gene': 'DNM3', 'score': 6.98}, {'connected_gene': 'PIR37492', 'score': 0.37}]
chr1	GH01I171644	171644802	171646601	1.3	[{'connected_gene': 'PRRC2C', 'score': 9.6}, {'connected_gene': 'MYOC', 'score': 6.69}, {'connected_gene': 'VAMP4', 'score': 5.7}, {'connected_gene': 'LOC105371612', 'score': 0.26}, {'connected_gene': 'GC01P171514', 'score': 0.12}]
chr1	GH01I171483	171483969	171487608	2.28	[{'connected_gene': 'PRRC2C', 'score': 558.15}, {'connected_gene': 'MYOC', 'score': 5.06}, {'connected_gene': 'GC01P171492', 'score': 0.44}]
chr1	GH01I171753	171753693	171755651	1.09	[{'connected_gene': 'LOC100422549', 'score': 550.77}, {'connected_gene': 'METTL13', 'score': 17.14}, {'connected_gene': 'MYOC', 'score': 15.19}, {'connected_gene': 'VAMP4', 'score': 8.38}, {'connected_gene': 'LOC100422548', 'score': 0.77}]
chr1	GH01I171803	171803161	171803330	0.2	[{'connected_gene': 'ENSG00000213060', 'score': 550.77}, {'connected_gene': 'RPS15P3', 'score': 550.77}, {'connected_gene': 'METTL13', 'score': 10.98}, {'connected_gene': 'MYOC', 'score': 9.91}, {'connected_gene': 'C1orf105', 'score': 9.3}, {'connected_gene': 'DNM3', 'score': 5.26}]
chr1	GH01I171511	171511573	171518278	0.59	[{'connected_gene': 'GC01P171514', 'score': 550.77}, {'connected_gene': 'PRRC2C', 'score': 35.13}, {'connected_gene': 'GORAB', 'score': 16.0}, {'connected_gene': 'DNM3OS', 'score': 10.74}, {'connected_gene': 'METTL13', 'score': 5.26}, {'connected_gene': 'MYOC', 'score': 5.05}, {'connected_gene': 'GC01P171492', 'score': 0.34}]