PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000335288	[[114303118, 114303850], [114304720, 114304822], [114305985, 114306042], [114307187, 114307387], [114307635, 114307749], [114309128, 114309257], [114312347, 114312501]]	[[114303688, 114303850], [114304720, 114304822], [114305985, 114306042], [114307187, 114307387], [114307635, 114307749], [114309128, 114309257], [114312347, 114312459]]
NM_000705	[[114303118, 114303850], [114304720, 114304822], [114305985, 114306042], [114307187, 114307387], [114307635, 114307749], [114309128, 114309257], [114312347, 114312513]]	[[114303688, 114303850], [114304720, 114304822], [114305985, 114306042], [114307187, 114307387], [114307635, 114307749], [114309128, 114309257], [114312347, 114312459]]

Promoter

Chrom	Start	End	Description
chr13	114312512	114312513	CAGE_peak_1_at_ATP4B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I113652	113651297	113651828	0.2	[{'connected_gene': 'GRK1', 'score': 17.72}, {'connected_gene': 'DCUN1D2', 'score': 9.16}, {'connected_gene': 'DCUN1D2-AS', 'score': 9.15}, {'connected_gene': 'PIR44469', 'score': 0.77}, {'connected_gene': 'GC13P113655', 'score': 0.77}, {'connected_gene': 'ATP4B', 'score': 0.44}, {'connected_gene': 'PIR60549', 'score': 0.22}]
chr13	GH13I113650	113650302	113651009	0.38	[{'connected_gene': 'GRK1', 'score': 15.25}, {'connected_gene': 'DCUN1D2', 'score': 9.16}, {'connected_gene': 'DCUN1D2-AS', 'score': 9.15}, {'connected_gene': 'PIR44469', 'score': 0.77}, {'connected_gene': 'GC13P113655', 'score': 0.77}, {'connected_gene': 'ATP4B', 'score': 0.44}, {'connected_gene': 'PIR60549', 'score': 0.22}]
chr13	GH13I113664	113664846	113664995	0.31	[{'connected_gene': 'GRK1', 'score': 0.77}, {'connected_gene': 'ATP4B', 'score': 0.44}]
chr13	GH13I113656	113656983	113658953	0.93	[{'connected_gene': 'ATP4B', 'score': 550.77}, {'connected_gene': 'GRK1', 'score': 8.77}, {'connected_gene': 'TMEM255B', 'score': 5.05}, {'connected_gene': 'TMCO3', 'score': 4.81}, {'connected_gene': 'LINC00552', 'score': 4.71}, {'connected_gene': 'PIR44469', 'score': 0.77}, {'connected_gene': 'GC13P113655', 'score': 0.77}]
chr13	GH13I113651	113651903	113652631	0.2	[{'connected_gene': 'TMEM255B', 'score': 18.35}, {'connected_gene': 'PIR44469', 'score': 0.77}, {'connected_gene': 'GC13P113655', 'score': 0.77}, {'connected_gene': 'ATP4B', 'score': 0.44}, {'connected_gene': 'PIR60549', 'score': 0.22}]
chr13	GH13I113653	113653426	113654001	0.46	[{'connected_gene': 'PIR44469', 'score': 550.77}, {'connected_gene': 'GC13P113655', 'score': 550.77}, {'connected_gene': 'TMCO3', 'score': 4.84}, {'connected_gene': 'ATP4B', 'score': 0.77}, {'connected_gene': 'PIR60549', 'score': 0.21}]