PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000408891	[[3181192, 3182268]]	[[3181263, 3182229]]
NM_002551	[[3181183, 3182268]]	[[3181263, 3182229]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I003750	3750530	3751779	1.25	[{'connected_gene': 'HASPIN', 'score': 12.8}, {'connected_gene': 'P2RX5', 'score': 11.26}, {'connected_gene': 'NCBP3', 'score': 11.19}, {'connected_gene': 'OR1E2', 'score': 4.09}, {'connected_gene': 'OR3A2', 'score': 2.78}, {'connected_gene': 'ATP2A3', 'score': 1.35}, {'connected_gene': 'ENSG00000262358', 'score': 0.34}, {'connected_gene': 'ITGAE', 'score': 0.23}]
chr17	GH17I003631	3631519	3631541	0.24	[{'connected_gene': 'OR1E2', 'score': 16.33}, {'connected_gene': 'OR1A2', 'score': 13.59}, {'connected_gene': 'SHPK', 'score': 13.23}, {'connected_gene': 'OR1A1', 'score': 6.97}, {'connected_gene': 'OR3A2', 'score': 2.44}, {'connected_gene': 'OR1E1', 'score': 2.04}, {'connected_gene': 'ENSG00000262304', 'score': 0.77}, {'connected_gene': 'LOC100422717', 'score': 0.39}]
chr17	GH17I003130	3130707	3130950	0.22	[{'connected_gene': 'OR3A2', 'score': 16.83}, {'connected_gene': 'OR1A1', 'score': 13.99}, {'connected_gene': 'OR1E2', 'score': 11.74}, {'connected_gene': 'OR1G1', 'score': 9.97}, {'connected_gene': 'OR1A2', 'score': 9.15}, {'connected_gene': 'TRPV3', 'score': 3.02}, {'connected_gene': 'TRPV1', 'score': 1.63}, {'connected_gene': 'GC17P003146', 'score': 0.37}]
chr17	GH17I002899	2899509	2904847	1.17	[{'connected_gene': 'OR3A2', 'score': 1.36}, {'connected_gene': 'GC17M002894', 'score': 0.44}, {'connected_gene': 'GC17M002899', 'score': 0.44}, {'connected_gene': 'RAP1GAP2', 'score': 0.11}]
chr17	GH17I003386	3386094	3386529	0.49	[{'connected_gene': 'OR3A1', 'score': 560.65}, {'connected_gene': 'OR3A2', 'score': 550.77}, {'connected_gene': 'OR1R1P', 'score': 550.77}, {'connected_gene': 'SPATA22', 'score': 15.23}, {'connected_gene': 'ASPA', 'score': 13.11}, {'connected_gene': 'OR3A3', 'score': 11.59}, {'connected_gene': 'OR1E2', 'score': 10.91}]
chr17	GH17I002958	2958935	2961952	1.54	[{'connected_gene': 'DPH1', 'score': 16.58}, {'connected_gene': 'RAP1GAP2', 'score': 9.95}, {'connected_gene': 'ENSG00000263345', 'score': 9.85}, {'connected_gene': 'OR3A2', 'score': 4.46}, {'connected_gene': 'OR1G1', 'score': 2.27}, {'connected_gene': 'LOC101927911', 'score': 0.44}, {'connected_gene': 'GC17P002937', 'score': 0.34}]