PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000259396	[[117085335, 117085527], [117085942, 117086085], [117086297, 117086368], [117087069, 117087177], [117087328, 117087432], [117088571, 117088755]]	[[117085413, 117085527], [117085942, 117086085], [117086297, 117086368], [117087069, 117087177], [117087328, 117087432], [117088571, 117088637]]
ENST00000538816	[[117085376, 117086085], [117086297, 117086584]]	[[117085413, 117085998]]
ENST00000477456	[[117086045, 117086085], [117086297, 117086368], [117087069, 117087177], [117087328, 117087531]]	None
NM_000607	[[117085302, 117085527], [117085942, 117086085], [117086297, 117086368], [117087069, 117087177], [117087328, 117087432], [117088571, 117088759]]	[[117085413, 117085527], [117085942, 117086085], [117086297, 117086368], [117087069, 117087177], [117087328, 117087432], [117088571, 117088637]]

Promoter

Chrom	Start	End	Description
chr9	117086005	117086035	CAGE_peak_1_at_ORM1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I114169	114169015	114178504	1.59	[{'connected_gene': 'COL27A1', 'score': 35.05}, {'connected_gene': 'PRPF4', 'score': 16.02}, {'connected_gene': 'MIR455', 'score': 12.34}, {'connected_gene': 'ORM1', 'score': 1.67}, {'connected_gene': 'GC09P114665', 'score': 0.77}, {'connected_gene': 'GC09P114318', 'score': 0.28}, {'connected_gene': 'GC09P114317', 'score': 0.28}]
chr9	GH09I114360	114360857	114391414	2.75	[{'connected_gene': 'AKNA', 'score': 576.12}, {'connected_gene': 'WHRN', 'score': 27.79}, {'connected_gene': 'TMEM268', 'score': 11.11}, {'connected_gene': 'ENSG00000201749', 'score': 11.11}, {'connected_gene': 'ORM1', 'score': 5.94}, {'connected_gene': 'ORM2', 'score': 1.46}, {'connected_gene': 'ATP6V1G1', 'score': 1.42}, {'connected_gene': 'ENSG00000235119', 'score': 0.34}]
chr9	GH09I114331	114331710	114335743	0.49	[{'connected_gene': 'ORM2', 'score': 6.25}, {'connected_gene': 'ORM1', 'score': 5.85}, {'connected_gene': 'WHRN', 'score': 5.21}, {'connected_gene': 'ENSG00000235119', 'score': 0.21}, {'connected_gene': 'AKNA', 'score': 0.21}]
chr9	GH09I114329	114329154	114330139	1.2	[{'connected_gene': 'ORM2', 'score': 557.4}, {'connected_gene': 'ORM1', 'score': 5.36}]
chr9	GH09I113992	113992298	113993400	1.04	[{'connected_gene': 'ORM2', 'score': 16.3}, {'connected_gene': 'AMBP', 'score': 15.09}, {'connected_gene': 'ORM1', 'score': 6.42}, {'connected_gene': 'COL27A1', 'score': 4.61}, {'connected_gene': 'GC09P114664', 'score': 0.21}, {'connected_gene': 'ZNF618', 'score': 0.13}]
chr9	GH09I114321	114321881	114322030	0.38	[{'connected_gene': 'ORM1', 'score': 550.77}, {'connected_gene': 'ORM2', 'score': 5.93}, {'connected_gene': 'WHRN', 'score': 4.93}, {'connected_gene': 'LOC105376224', 'score': 0.77}]
chr9	GH09I114323	114323013	114323072	0.5	[{'connected_gene': 'ORM1', 'score': 550.77}, {'connected_gene': 'ORM2', 'score': 0.44}]
chr9	GH09I114314	114314999	114315454	0.94	[{'connected_gene': 'ORM1', 'score': 21.01}, {'connected_gene': 'AMBP', 'score': 19.81}, {'connected_gene': 'ORM2', 'score': 8.39}, {'connected_gene': 'LOC105376224', 'score': 0.77}, {'connected_gene': 'MIR455', 'score': 0.14}]
chr9	GH09I114324	114324933	114326995	0.43	[{'connected_gene': 'ORM1', 'score': 9.77}, {'connected_gene': 'WHRN', 'score': 5.72}, {'connected_gene': 'ORM2', 'score': 5.44}]
chr9	GH09I114317	114317576	114318772	1.24	[{'connected_gene': 'LOC105376224', 'score': 550.77}, {'connected_gene': 'ORM2', 'score': 10.5}, {'connected_gene': 'ATP6V1G1', 'score': 2.24}, {'connected_gene': 'ORM1', 'score': 2.22}, {'connected_gene': 'TNFSF15', 'score': 2.12}, {'connected_gene': 'MIR455', 'score': 0.14}]