PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000242462	[[71331453, 71332800], [71332965, 71332994]]	[[71332154, 71332799]]
NM_020999	[[71331790, 71332800], [71332965, 71333210]]	[[71332154, 71332799]]

Promoter

Chrom	Start	End	Description
chr10	71333172	71333186	CAGE_peak_1_at_NEUROG3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I069507	69506227	69506757	0.2	[{'connected_gene': 'NEUROG3', 'score': 11.24}, {'connected_gene': 'LOC101929021', 'score': 11.24}, {'connected_gene': 'FAM241B', 'score': 10.88}, {'connected_gene': 'TMEM256P1', 'score': 0.37}, {'connected_gene': 'GC10M069447', 'score': 0.28}, {'connected_gene': 'TSPAN15', 'score': 0.18}]
chr10	GH10I069637	69637005	69637154	0.49	[{'connected_gene': 'NEUROG3', 'score': 11.28}, {'connected_gene': 'LOC101929021', 'score': 11.28}, {'connected_gene': 'COL13A1', 'score': 10.57}, {'connected_gene': 'FAM241B', 'score': 0.44}, {'connected_gene': 'LOC105378346', 'score': 0.25}]
chr10	GH10I069574	69574645	69575227	0.65	[{'connected_gene': 'NEUROG3', 'score': 550.77}, {'connected_gene': 'LOC101929021', 'score': 550.77}, {'connected_gene': 'MTATP6P23', 'score': 0.37}]
chr10	GH10I069501	69501900	69503649	0.43	[{'connected_gene': 'TSPAN15', 'score': 13.24}, {'connected_gene': 'NEUROG3', 'score': 11.23}, {'connected_gene': 'LOC101929021', 'score': 11.23}, {'connected_gene': 'FAM241B', 'score': 10.88}, {'connected_gene': 'TMEM256P1', 'score': 0.34}, {'connected_gene': 'GC10M069447', 'score': 0.29}]
chr10	GH10I069490	69490959	69500035	0.8	[{'connected_gene': 'TSPAN15', 'score': 40.19}, {'connected_gene': 'NEUROG3', 'score': 11.22}, {'connected_gene': 'LOC101929021', 'score': 11.22}, {'connected_gene': 'FAM241B', 'score': 10.92}, {'connected_gene': 'GC10M069447', 'score': 0.31}, {'connected_gene': 'TMEM256P1', 'score': 0.31}]
chr10	GH10I069576	69576019	69578973	0.79	[{'connected_gene': 'FAM241B', 'score': 11.73}, {'connected_gene': 'NEUROG3', 'score': 0.77}, {'connected_gene': 'LOC101929021', 'score': 0.77}, {'connected_gene': 'MTATP6P23', 'score': 0.39}]
chr10	GH10I069538	69538556	69538758	0.24	[{'connected_gene': 'LOC105378345', 'score': 550.77}, {'connected_gene': 'HK1', 'score': 61.45}, {'connected_gene': 'NEUROG3', 'score': 12.19}, {'connected_gene': 'LOC101929021', 'score': 12.19}, {'connected_gene': 'FAM241B', 'score': 11.38}, {'connected_gene': 'TMEM256P1', 'score': 0.39}]
chr10	GH10I069595	69595893	69596066	0.22	[{'connected_gene': 'MTND2P15', 'score': 550.77}, {'connected_gene': 'MTND1P20', 'score': 550.77}, {'connected_gene': 'FAM241B', 'score': 12.46}, {'connected_gene': 'NEUROG3', 'score': 12.11}, {'connected_gene': 'LOC101929021', 'score': 12.11}]