PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000377942	[[53418108, 53419068], [53419559, 53419767], [53419940, 53422775]]	[[53418694, 53419068], [53419559, 53419767], [53419940, 53422571]]
ENST00000338862	[[53418115, 53419068], [53419559, 53419767], [53420231, 53422640]]	[[53418694, 53419068], [53419559, 53419767], [53420231, 53422571]]
NM_002590	[[53418108, 53419068], [53419559, 53419767], [53419940, 53422775]]	[[53418694, 53419068], [53419559, 53419767], [53419940, 53422571]]
NM_032949	[[53418108, 53419068], [53419559, 53419767], [53420231, 53422775]]	[[53418694, 53419068], [53419559, 53419767], [53420231, 53422571]]

Promoter

Chrom	Start	End	Description
chr13	53422767	53422780	CAGE_peak_1_at_PCDH8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I052779	52779137	52779245	0.22	[{'connected_gene': 'PCDH8', 'score': 3.08}, {'connected_gene': 'HNRNPA1L2', 'score': 1.49}, {'connected_gene': 'LOC105370209', 'score': 0.39}, {'connected_gene': 'MIR759', 'score': 0.29}]
chr13	GH13I052845	52845346	52845475	0.46	[{'connected_gene': 'PCDH8', 'score': 0.77}, {'connected_gene': 'PPIAP26', 'score': 0.34}, {'connected_gene': 'GC13M052802', 'score': 0.2}]
chr13	GH13I052847	52847106	52847175	0.57	[{'connected_gene': 'PCDH8', 'score': 550.77}, {'connected_gene': 'PPIAP26', 'score': 0.31}, {'connected_gene': 'GC13M052802', 'score': 0.21}]
chr13	GH13I052896	52896759	52897675	0.54	[{'connected_gene': 'PCDH8', 'score': 11.23}, {'connected_gene': 'PPIAP26', 'score': 5.09}, {'connected_gene': 'GC13M052802', 'score': 0.39}]
chr13	GH13I053336	53336824	53336915	0.22	[{'connected_gene': 'PCDH8', 'score': 3.56}, {'connected_gene': 'ENSG00000273919', 'score': 0.44}, {'connected_gene': 'RN7SL618P', 'score': 0.18}]
chr13	GH13I052848	52848606	52848755	1.04	[{'connected_gene': 'PCDH8', 'score': 550.77}, {'connected_gene': 'GC13M052802', 'score': 0.21}]
chr13	GH13I052850	52850060	52852278	1.14	[{'connected_gene': 'PCDH8', 'score': 0.77}, {'connected_gene': 'GC13M052802', 'score': 0.22}]
chr13	GH13I052879	52879906	52881353	0.49	[{'connected_gene': 'MIR759', 'score': 10.62}, {'connected_gene': 'CKAP2', 'score': 4.04}, {'connected_gene': 'GC13M052802', 'score': 0.29}, {'connected_gene': 'PCDH8', 'score': 0.29}]
chr13	GH13I052906	52906152	52906818	0.2	[{'connected_gene': 'GC13M052802', 'score': 0.77}, {'connected_gene': 'PCDH8', 'score': 0.22}]