PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000406053	[[53759809, 53761022], [53831963, 53832052], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992686]]	[[53831966, 53832052], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992686]]
ENST00000263634	[[53897117, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992722], [54013957, 54014079]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992709]]
ENST00000406687	[[53897455, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [54013421, 54014081]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978055]]
ENST00000394717	[[53897455, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [54013957, 54014146]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978055]]
ENST00000352846	[[53897455, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992722], [54086964, 54087170]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992722], [54086964, 54087065]]
ENST00000470916	[[53941712, 53941718], [53943702, 53943880], [53977919, 53978078], [53992513, 53992722], [54013957, 54013986]]	None
ENST00000414369	[[53984007, 53984075], [53990618, 53990743], [53992513, 53992722], [54014622, 54014747]]	None
ENST00000482339	[[53808340, 53808515], [53830521, 53830655], [53831410, 53831558], [53831894, 53832052], [53833056, 53833215]]	None
ENST00000490794	[[53831783, 53832052], [53833056, 53833217], [53833558, 53833596]]	None
ENST00000482829	[[53897434, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992722], [53995248, 53995383]]	None
ENST00000470707	[[53897742, 53897827], [53921020, 53921699]]	None
ENST00000480522	[[53955908, 53955984], [53956594, 53956707], [53975417, 53975504], [53977919, 53978078], [53992513, 53992698]]	None
ENST00000489508	[[53956597, 53956707], [53977919, 53978078], [53992513, 53992722], [53994581, 53994663]]	None
ENST00000482134	[[53977920, 53978078], [53992513, 53992722], [53994408, 53994664]]	None
NM_001201965	[[53897116, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [54013421, 54013985]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978055]]
NM_016115	[[53897116, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992722], [54013957, 54014146]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [53992513, 53992709]]
NM_145863	[[53897116, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978078], [54013957, 54014146]]	[[53897639, 53897827], [53921020, 53921151], [53927407, 53927665], [53941520, 53941718], [53943702, 53943880], [53955848, 53955984], [53956594, 53956707], [53977919, 53978055]]

Promoter

Chrom	Start	End	Description
chr2	54013972	54014032	CAGE_peak_2_at_ASB3_5end,CAGE_peak_2_at_GPR75-ASB3_5end
chr2	54014055	54014123	CAGE_peak_1_at_ASB3_5end,CAGE_peak_1_at_GPR75-ASB3_5end
chr2	54014127	54014151	CAGE_peak_4_at_ASB3_5end,CAGE_peak_4_at_GPR75-ASB3_5end
chr2	54087042	54087053	CAGE_peak_5_at_ASB3_5end,CAGE_peak_5_at_GPR75-ASB3_5end
chr2	54087066	54087151	CAGE_peak_1_at_GPR75_5end,CAGE_peak_3_at_ASB3_5end,CAGE_peak_3_at_GPR75-ASB3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I053820	53820184	53820333	0.2	[{'connected_gene': 'ACYP2', 'score': 15.78}, {'connected_gene': 'PIR55664', 'score': 0.39}, {'connected_gene': 'ERLEC1', 'score': 0.29}, {'connected_gene': 'ASB3', 'score': 0.29}, {'connected_gene': 'GPR75-ASB3', 'score': 0.28}]
chr2	GH02I053967	53967695	53972366	2.53	[{'connected_gene': 'ACYP2', 'score': 570.2}, {'connected_gene': 'PSME4', 'score': 555.39}, {'connected_gene': 'HMGB1P31', 'score': 7.73}, {'connected_gene': 'ASB3', 'score': 1.54}, {'connected_gene': 'GPR75-ASB3', 'score': 0.14}]
chr2	GH02I053993	53993233	53995988	1.07	[{'connected_gene': 'ACYP2', 'score': 28.23}, {'connected_gene': 'HMGB1P31', 'score': 5.38}, {'connected_gene': 'ASB3', 'score': 4.05}, {'connected_gene': 'PSME4', 'score': 2.3}, {'connected_gene': 'GC02P053991', 'score': 0.77}, {'connected_gene': 'GC02P054007', 'score': 0.39}]
chr2	GH02I053827	53827904	53828053	0.51	[{'connected_gene': 'ACYP2', 'score': 4.89}, {'connected_gene': 'PIR55664', 'score': 0.77}, {'connected_gene': 'GPR75-ASB3', 'score': 0.29}, {'connected_gene': 'ASB3', 'score': 0.26}]
chr2	GH02I053826	53826226	53827418	1.59	[{'connected_gene': 'ACYP2', 'score': 16.46}, {'connected_gene': 'PIR55664', 'score': 0.77}, {'connected_gene': 'GPR75-ASB3', 'score': 0.29}, {'connected_gene': 'ERLEC1', 'score': 0.28}, {'connected_gene': 'ASB3', 'score': 0.28}]
chr2	GH02I053785	53785485	53788485	2.07	[{'connected_gene': 'ASB3', 'score': 554.8}, {'connected_gene': 'ERLEC1', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 17.08}, {'connected_gene': 'GPR75', 'score': 4.45}, {'connected_gene': 'GPR75-ASB3', 'score': 0.19}]
chr2	GH02I053766	53766744	53769247	1.99	[{'connected_gene': 'CHAC2', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 8.79}, {'connected_gene': 'ASB3', 'score': 4.31}, {'connected_gene': 'ERLEC1', 'score': 0.37}, {'connected_gene': 'GC02P053747', 'score': 0.34}, {'connected_gene': 'GPR75-ASB3', 'score': 0.16}]
chr2	GH02I053769	53769444	53769487	0.66	[{'connected_gene': 'CHAC2', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 16.94}, {'connected_gene': 'ERLEC1', 'score': 0.37}, {'connected_gene': 'ASB3', 'score': 0.37}, {'connected_gene': 'GC02P053747', 'score': 0.34}, {'connected_gene': 'GPR75-ASB3', 'score': 0.16}]
chr2	GH02I053811	53811722	53814192	0.63	[{'connected_gene': 'ERLEC1', 'score': 11.87}, {'connected_gene': 'ASB3', 'score': 11.87}, {'connected_gene': 'ACYP2', 'score': 11.74}, {'connected_gene': 'PIR55664', 'score': 0.37}, {'connected_gene': 'GPR75-ASB3', 'score': 0.25}]
chr2	GH02I053791	53791902	53792237	0.31	[{'connected_gene': 'GPR75', 'score': 8.3}, {'connected_gene': 'ACYP2', 'score': 7.01}, {'connected_gene': 'ASB3', 'score': 3.06}, {'connected_gene': 'ERLEC1', 'score': 0.44}, {'connected_gene': 'PIR55664', 'score': 0.28}, {'connected_gene': 'GPR75-ASB3', 'score': 0.2}]
chr2	GH02I053738	53738917	53739310	0.41	[{'connected_gene': 'GPR75', 'score': 5.25}, {'connected_gene': 'PSME4', 'score': 3.31}, {'connected_gene': 'GC02P053747', 'score': 0.44}, {'connected_gene': 'ASB3', 'score': 0.25}, {'connected_gene': 'GC02M053662', 'score': 0.19}, {'connected_gene': 'GPR75-ASB3', 'score': 0.13}]
chr2	GH02I053559	53559664	53559813	0.69	[{'connected_gene': 'GC02M053561', 'score': 0.77}, {'connected_gene': 'ENSG00000223897', 'score': 0.19}, {'connected_gene': 'ASB3', 'score': 0.07}]
chr2	GH02I053646	53646533	53647132	0.2	[{'connected_gene': 'GC02M053662', 'score': 0.37}, {'connected_gene': 'LOC105374601', 'score': 0.26}, {'connected_gene': 'ASB3', 'score': 0.11}]
chr2	GH02I053593	53593881	53594910	0.76	[{'connected_gene': 'ENSG00000251942', 'score': 9.81}, {'connected_gene': 'LOC105374600', 'score': 0.44}, {'connected_gene': 'GC02M053575', 'score': 0.39}, {'connected_gene': 'ASB3', 'score': 0.08}]