PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000236709	[[137842559, 137843720], [137849690, 137850124], [137851053, 137851229]]	[[137843105, 137843720], [137849690, 137850098]]
NM_016161	[[137842559, 137843720], [137849690, 137850124], [137851053, 137851229]]	[[137843105, 137843720], [137849690, 137850098]]

Promoter

Chrom	Start	End	Description
chr3	137851220	137851236	CAGE_peak_1_at_A4GNT_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I138888	138888402	138892199	1.22	[{'connected_gene': 'ATP5MC1P3', 'score': 550.77}, {'connected_gene': 'PIK3CB', 'score': 21.3}, {'connected_gene': 'CEP70', 'score': 10.38}, {'connected_gene': 'FAIM', 'score': 8.62}, {'connected_gene': 'A4GNT', 'score': 4.5}, {'connected_gene': 'LINC01391', 'score': 0.23}]
chr3	GH03I138860	138860777	138864579	1.73	[{'connected_gene': 'DBR1', 'score': 10.5}, {'connected_gene': 'COPB2', 'score': 10.28}, {'connected_gene': 'PIK3CB', 'score': 8.62}, {'connected_gene': 'FAIM', 'score': 8.15}, {'connected_gene': 'A4GNT', 'score': 4.47}, {'connected_gene': 'MRPS22', 'score': 2.34}, {'connected_gene': 'ATP5MC1P3', 'score': 0.31}]
chr3	GH03I138173	138173625	138175508	2.02	[{'connected_gene': 'DBR1', 'score': 569.05}, {'connected_gene': 'A4GNT', 'score': 38.45}]
chr3	GH03I138172	138172801	138173000	0.2	[{'connected_gene': 'DBR1', 'score': 0.77}, {'connected_gene': 'A4GNT', 'score': 0.26}]
chr3	GH03I138132	138132380	138132439	0.5	[{'connected_gene': 'A4GNT', 'score': 550.77}, {'connected_gene': 'DBR1', 'score': 0.26}]
chr3	GH03I138135	138135001	138137600	0.31	[{'connected_gene': 'A4GNT', 'score': 50.89}, {'connected_gene': 'DBR1', 'score': 7.1}]
chr3	GH03I138080	138080772	138084322	1.1	[{'connected_gene': 'A4GNT', 'score': 12.76}, {'connected_gene': 'DZIP1L', 'score': 12.19}, {'connected_gene': 'MRAS', 'score': 6.22}, {'connected_gene': 'LOC105374128', 'score': 0.34}, {'connected_gene': 'KRT8P36', 'score': 0.34}]
chr3	GH03I138077	138077554	138080071	0.74	[{'connected_gene': 'A4GNT', 'score': 11.84}, {'connected_gene': 'DZIP1L', 'score': 11.81}, {'connected_gene': 'LOC105374128', 'score': 0.34}, {'connected_gene': 'KRT8P36', 'score': 0.34}]
chr3	GH03I138124	138124591	138126641	0.77	[{'connected_gene': 'A4GNT', 'score': 40.23}, {'connected_gene': 'DZIP1L', 'score': 0.44}]
chr3	GH03I138088	138088731	138090057	0.38	[{'connected_gene': 'A4GNT', 'score': 13.31}, {'connected_gene': 'KRT8P36', 'score': 0.39}, {'connected_gene': 'DZIP1L', 'score': 0.31}, {'connected_gene': 'LOC105374128', 'score': 0.29}]
chr3	GH03I138326	138326145	138330508	2.06	[{'connected_gene': 'NME9', 'score': 550.77}, {'connected_gene': 'A4GNT', 'score': 3.95}, {'connected_gene': 'GC03P138286', 'score': 0.26}]
chr3	GH03I138186	138186259	138189296	2.04	[{'connected_gene': 'ARMC8', 'score': 550.77}, {'connected_gene': 'MRAS', 'score': 12.2}, {'connected_gene': 'CEP70', 'score': 11.64}, {'connected_gene': 'A4GNT', 'score': 4.1}, {'connected_gene': 'GC03P138286', 'score': 0.15}]
chr3	GH03I138118	138118800	138119148	0.83	[{'connected_gene': 'MRAS', 'score': 6.91}, {'connected_gene': 'DZIP1L', 'score': 0.77}, {'connected_gene': 'A4GNT', 'score': 0.39}]
chr3	GH03I138112	138112074	138116472	1.84	[{'connected_gene': 'DZIP1L', 'score': 550.77}, {'connected_gene': 'PIR46402', 'score': 550.77}, {'connected_gene': 'A4GNT', 'score': 27.26}, {'connected_gene': 'KRT8P36', 'score': 0.39}]