PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000491834	[[3190675, 3192729], [3194139, 3194271], [3195107, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3221304, 3221375]]	None
ENST00000488263	[[3191694, 3192729], [3194139, 3194271], [3195107, 3198468]]	None
ENST00000424814	[[3191694, 3192729], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221358]]	[[3192548, 3192729], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221358]]
ENST00000432408	[[3191694, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216950], [3221304, 3221394]]	[[3192548, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216950], [3221304, 3221371]]
ENST00000231948	[[3191694, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221394]]	[[3192548, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221371]]
ENST00000459840	[[3192543, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196654]]	None
ENST00000498442	[[3192671, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195876]]	None
ENST00000482844	[[3196233, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214607]]	None
ENST00000480249	[[3197773, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215805]]	None
ENST00000450014	[[3209113, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221358]]	[[3209305, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221358]]
ENST00000498700	[[3213859, 3214330], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221385]]	None
ENST00000492178	[[3214400, 3214609], [3215742, 3215945], [3216846, 3216934]]	None
ENST00000478353	[[3215570, 3215945], [3216846, 3216953], [3221304, 3221388]]	None
NM_016302	[[3191316, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221401]]	[[3192548, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216953], [3221304, 3221371]]
NM_001173482	[[3191316, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216950], [3221304, 3221401]]	[[3192548, 3192729], [3194139, 3194271], [3195107, 3195172], [3195643, 3195759], [3196430, 3196515], [3197902, 3197965], [3209317, 3209477], [3214459, 3214609], [3215742, 3215945], [3216846, 3216950], [3221304, 3221371]]

Promoter

Chrom	Start	End	Description
chr3	3221368	3221391	CAGE_peak_1_at_CRBN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I003145	3145492	3148924	0.43	[{'connected_gene': 'TRNT1', 'score': 34.54}, {'connected_gene': 'CRBN', 'score': 31.51}, {'connected_gene': 'IL5RA', 'score': 12.89}, {'connected_gene': 'ENSG00000253049', 'score': 11.14}, {'connected_gene': 'ENSG00000271870', 'score': 5.21}, {'connected_gene': 'GC03P003130', 'score': 0.37}]
chr3	GH03I003170	3170465	3176616	0.99	[{'connected_gene': 'TRNT1', 'score': 29.6}, {'connected_gene': 'CRBN', 'score': 21.02}, {'connected_gene': 'IL5RA', 'score': 12.18}, {'connected_gene': 'ENSG00000271870', 'score': 0.34}]
chr3	GH03I003188	3188796	3190698	0.81	[{'connected_gene': 'TRNT1', 'score': 15.89}, {'connected_gene': 'CRBN', 'score': 0.39}, {'connected_gene': 'GC03M003375', 'score': 0.08}]
chr3	GH03I003191	3191224	3192964	1.26	[{'connected_gene': 'TRNT1', 'score': 11.33}, {'connected_gene': 'IL5RA', 'score': 11.05}, {'connected_gene': 'CRBN', 'score': 3.85}, {'connected_gene': 'GC03M003375', 'score': 0.09}]
chr3	GH03I003125	3125802	3128844	2.27	[{'connected_gene': 'TRNT1', 'score': 556.02}, {'connected_gene': 'IL5RA', 'score': 550.77}, {'connected_gene': 'CRBN', 'score': 21.59}, {'connected_gene': 'GC03P003130', 'score': 0.77}]
chr3	GH03I003136	3136745	3140649	0.31	[{'connected_gene': 'CRBN', 'score': 32.41}, {'connected_gene': 'TRNT1', 'score': 21.54}, {'connected_gene': 'ENSG00000253049', 'score': 11.44}, {'connected_gene': 'ENSG00000271870', 'score': 6.06}, {'connected_gene': 'GC03P003130', 'score': 0.44}]
chr3	GH03I003166	3166743	3169636	0.31	[{'connected_gene': 'CRBN', 'score': 19.22}, {'connected_gene': 'TRNT1', 'score': 17.38}, {'connected_gene': 'ENSG00000271870', 'score': 0.37}]
chr3	GH03I003140	3140954	3142736	0.2	[{'connected_gene': 'CRBN', 'score': 15.38}, {'connected_gene': 'ENSG00000253049', 'score': 11.26}, {'connected_gene': 'ENSG00000271870', 'score': 6.1}, {'connected_gene': 'GC03P003130', 'score': 0.39}, {'connected_gene': 'TRNT1', 'score': 0.39}]
chr3	GH03I003209	3209164	3210693	0.2	[{'connected_gene': 'CRBN', 'score': 11.16}, {'connected_gene': 'TRNT1', 'score': 4.89}, {'connected_gene': 'GC03M003375', 'score': 0.09}]
chr3	GH03I003161	3161872	3164359	0.31	[{'connected_gene': 'CRBN', 'score': 19.4}, {'connected_gene': 'TRNT1', 'score': 17.56}, {'connected_gene': 'ENSG00000271870', 'score': 0.39}]
chr3	GH03I003177	3177626	3180326	2.29	[{'connected_gene': 'CRBN', 'score': 568.93}, {'connected_gene': 'TRNT1', 'score': 18.43}, {'connected_gene': 'ENSG00000271870', 'score': 6.22}]
chr3	GH03I003176	3176943	3177135	0.51	[{'connected_gene': 'CRBN', 'score': 0.77}, {'connected_gene': 'ENSG00000271870', 'score': 0.34}]
chr3	GH03I003148	3148990	3159022	0.56	[{'connected_gene': 'ENSG00000271870', 'score': 556.49}, {'connected_gene': 'CRBN', 'score': 32.69}, {'connected_gene': 'TRNT1', 'score': 22.26}, {'connected_gene': 'ENSG00000253049', 'score': 10.82}]
chr3	GH03I003135	3135473	3135584	0.58	[{'connected_gene': 'ENSG00000253049', 'score': 11.46}, {'connected_gene': 'ENSG00000271870', 'score': 6.51}, {'connected_gene': 'CRBN', 'score': 2.55}, {'connected_gene': 'GC03P003130', 'score': 0.44}, {'connected_gene': 'TRNT1', 'score': 0.44}]
chr3	GH03I003309	3309917	3310066	0.2	[{'connected_gene': 'GC03M003375', 'score': 0.19}, {'connected_gene': 'CRBN', 'score': 0.12}, {'connected_gene': 'ENSG00000223727', 'score': 0.06}]
chr3	GH03I003160	3160557	3160888	0.43	[{'connected_gene': 'ENSG00000271870', 'score': 0.44}, {'connected_gene': 'CRBN', 'score': 0.37}]
chr3	GH03I003164	3164830	3165843	0.2	[{'connected_gene': 'ENSG00000271870', 'score': 0.39}, {'connected_gene': 'CRBN', 'score': 0.39}]
chr3	GH03I003356	3356544	3357738	0.31	[{'connected_gene': 'GC03M003375', 'score': 0.34}, {'connected_gene': 'CRBN', 'score': 0.1}, {'connected_gene': 'ENSG00000223727', 'score': 0.06}]