PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000375664	[[28821421, 28821936], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28912041]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
ENST00000375646	[[28821712, 28821936], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899639, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908905]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899639, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
ENST00000347934	[[28822241, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28909472]]	[[28822508, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
ENST00000354911	[[28822347, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28909472]]	[[28822508, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
ENST00000428935	[[28822423, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900183, 28900341]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900183, 28900341]]
ENST00000420266	[[28822434, 28822511], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884799]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884799]]
ENST00000424454	[[28822468, 28822549], [28822926, 28822963], [28823162, 28823275], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899639]]	[[28822508, 28822549], [28822926, 28822963], [28823162, 28823189]]
ENST00000442148	[[28822677, 28822822], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884706]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884706]]
ENST00000448193	[[28822691, 28822963], [28824490, 28824686], [28872327, 28872365]]	[[28824547, 28824686], [28872327, 28872365]]
ENST00000414108	[[28823051, 28823111], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884885]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884885]]
ENST00000439676	[[28824194, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900183, 28900410], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908908]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900183, 28900341]]
ENST00000345541	[[28824614, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899636, 28900851], [28903495, 28905291], [28906585, 28906713], [28908465, 28908889]]	None
ENST00000526722	[[28821701, 28821936], [28822926, 28823111], [28824490, 28824655]]	[[28824547, 28824655]]
ENST00000528491	[[28821704, 28821936], [28822926, 28822963], [28824490, 28824686], [28824847, 28824889]]	None
ENST00000532233	[[28821707, 28821936], [28822926, 28822963], [28824490, 28824686], [28826512, 28826593]]	None
ENST00000530865	[[28822525, 28822549], [28822926, 28822963], [28824490, 28824897]]	None
ENST00000472862	[[28877665, 28878780], [28879648, 28880762]]	None
ENST00000476046	[[28884855, 28884970], [28897114, 28897522]]	None
ENST00000495268	[[28897274, 28897360], [28899627, 28899750], [28900183, 28900520]]	None
ENST00000480474	[[28903927, 28905291], [28906585, 28906970]]	None
NM_100264	[[28821516, 28821936], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28912041]]	[[28824547, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
NM_100486	[[28822420, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28912041]]	[[28822508, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]
NM_016628	[[28822420, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28912041]]	[[28822508, 28822549], [28822926, 28822963], [28824490, 28824686], [28872327, 28872434], [28878664, 28878780], [28879648, 28879761], [28884661, 28884970], [28897114, 28897360], [28899627, 28899750], [28900702, 28900851], [28903495, 28903614], [28905101, 28905291], [28906585, 28906713], [28908465, 28908535]]

Promoter

Chrom	Start	End	Description
chr10	28821674	28821715	CAGE_peak_2_at_WAC_5end
chr10	28821724	28821742	CAGE_peak_3_at_WAC_5end
chr10	28822025	28822036	CAGE_peak_6_at_WAC_5end
chr10	28822037	28822082	CAGE_peak_1_at_WAC_5end
chr10	28822202	28822234	CAGE_peak_7_at_WAC_5end
chr10	28822236	28822292	CAGE_peak_4_at_WAC_5end
chr10	28822417	28822441	CAGE_peak_11_at_WAC_5end
chr10	28822636	28822657	CAGE_peak_8_at_WAC_5end
chr10	28824063	28824067	CAGE_peak_10_at_WAC_5end
chr10	28824473	28824484	CAGE_peak_20_at_WAC_5end
chr10	28824487	28824507	CAGE_peak_22_at_WAC_5end
chr10	28824634	28824652	CAGE_peak_17_at_WAC_5end
chr10	28878705	28878720	CAGE_peak_5_at_WAC_5end
chr10	28884801	28884825	CAGE_peak_15_at_WAC_5end
chr10	28884887	28884922	CAGE_peak_12_at_WAC_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I028432	28432002	28432663	0.94	[{'connected_gene': 'WAC', 'score': 11.43}, {'connected_gene': 'WAC-AS1', 'score': 11.43}, {'connected_gene': 'RPSAP10', 'score': 0.77}, {'connected_gene': 'ENSG00000222666', 'score': 0.34}]
chr10	GH10I028458	28458972	28460074	0.2	[{'connected_gene': 'WAC', 'score': 6.19}, {'connected_gene': 'WAC-AS1', 'score': 4.95}, {'connected_gene': 'RN7SKP39', 'score': 0.37}, {'connected_gene': 'LOC105376468', 'score': 0.28}]
chr10	GH10I028535	28535592	28535741	0.38	[{'connected_gene': 'WAC', 'score': 0.77}, {'connected_gene': 'WAC-AS1', 'score': 0.77}, {'connected_gene': 'PIR60646', 'score': 0.18}]
chr10	GH10I028569	28569932	28570041	0.94	[{'connected_gene': 'WAC', 'score': 9.17}, {'connected_gene': 'WAC-AS1', 'score': 0.28}, {'connected_gene': 'PIR60646', 'score': 0.25}]
chr10	GH10I028541	28541537	28543130	0.46	[{'connected_gene': 'WAC', 'score': 9.15}, {'connected_gene': 'WAC-AS1', 'score': 0.44}, {'connected_gene': 'PIR60646', 'score': 0.18}]
chr10	GH10I028478	28478794	28480040	0.92	[{'connected_gene': 'WAC', 'score': 5.39}, {'connected_gene': 'LOC105376468', 'score': 0.37}, {'connected_gene': 'RN7SKP39', 'score': 0.28}]
chr10	GH10I028675	28675661	28682961	2.07	[{'connected_gene': 'BAMBI', 'score': 558.21}, {'connected_gene': 'WAC-AS1', 'score': 19.26}, {'connected_gene': 'RNU6-270P', 'score': 10.65}, {'connected_gene': 'LYZL1', 'score': 9.77}, {'connected_gene': 'WAC', 'score': 5.03}, {'connected_gene': 'LOC105376470', 'score': 0.31}]
chr10	GH10I028531	28531208	28535204	2.27	[{'connected_gene': 'WAC-AS1', 'score': 595.79}, {'connected_gene': 'WAC', 'score': 559.49}, {'connected_gene': 'BAMBI', 'score': 5.42}, {'connected_gene': 'PIR60646', 'score': 0.17}]
chr10	GH10I028491	28491401	28493306	0.51	[{'connected_gene': 'WAC-AS1', 'score': 39.33}, {'connected_gene': 'WAC', 'score': 6.82}, {'connected_gene': 'LOC105376468', 'score': 0.77}, {'connected_gene': 'RN7SKP39', 'score': 0.25}]
chr10	GH10I028499	28499482	28500862	0.54	[{'connected_gene': 'WAC-AS1', 'score': 35.2}, {'connected_gene': 'WAC', 'score': 12.04}, {'connected_gene': 'LOC105376468', 'score': 0.77}, {'connected_gene': 'GC10P028507', 'score': 0.44}]
chr10	GH10I028503	28503232	28503381	0.69	[{'connected_gene': 'WAC-AS1', 'score': 52.85}, {'connected_gene': 'WAC', 'score': 12.06}, {'connected_gene': 'GC10P028507', 'score': 0.77}, {'connected_gene': 'LOC105376468', 'score': 0.44}]
chr10	GH10I028502	28502106	28502946	0.86	[{'connected_gene': 'WAC-AS1', 'score': 54.22}, {'connected_gene': 'WAC', 'score': 12.06}, {'connected_gene': 'GC10P028507', 'score': 0.77}, {'connected_gene': 'LOC105376468', 'score': 0.44}]
chr10	GH10I028545	28545272	28546628	0.43	[{'connected_gene': 'WAC-AS1', 'score': 40.64}, {'connected_gene': 'WAC', 'score': 0.39}, {'connected_gene': 'PIR60646', 'score': 0.19}]
chr10	GH10I028563	28563870	28565606	0.52	[{'connected_gene': 'WAC-AS1', 'score': 53.92}, {'connected_gene': 'WAC', 'score': 11.79}, {'connected_gene': 'PIR60646', 'score': 0.22}]
chr10	GH10I028577	28577496	28578950	0.49	[{'connected_gene': 'WAC-AS1', 'score': 18.8}, {'connected_gene': 'WAC', 'score': 9.14}, {'connected_gene': 'PIR60646', 'score': 0.26}]
chr10	GH10I028584	28584918	28586454	0.38	[{'connected_gene': 'WAC-AS1', 'score': 40.21}, {'connected_gene': 'PIR60646', 'score': 0.29}, {'connected_gene': 'WAC', 'score': 0.23}]
chr10	GH10I028601	28601463	28602955	0.31	[{'connected_gene': 'WAC-AS1', 'score': 5.62}, {'connected_gene': 'PIR60646', 'score': 0.37}, {'connected_gene': 'WAC', 'score': 0.2}]
chr10	GH10I028553	28553510	28555965	0.52	[{'connected_gene': 'WAC-AS1', 'score': 39.75}, {'connected_gene': 'WAC', 'score': 9.38}, {'connected_gene': 'PIR60646', 'score': 0.2}]
chr10	GH10I028592	28592572	28593432	1.02	[{'connected_gene': 'WAC-AS1', 'score': 51.42}, {'connected_gene': 'WAC', 'score': 11.01}, {'connected_gene': 'PIR60646', 'score': 0.31}]
chr10	GH10I028614	28614806	28615911	0.31	[{'connected_gene': 'WAC-AS1', 'score': 16.94}, {'connected_gene': 'PIR60646', 'score': 0.77}, {'connected_gene': 'WAC', 'score': 0.18}]
chr10	GH10I028579	28579506	28581581	0.43	[{'connected_gene': 'WAC-AS1', 'score': 51.35}, {'connected_gene': 'WAC', 'score': 20.08}, {'connected_gene': 'PIR60646', 'score': 0.28}]
chr10	GH10I028558	28558755	28560559	0.99	[{'connected_gene': 'WAC-AS1', 'score': 51.8}, {'connected_gene': 'WAC', 'score': 11.81}, {'connected_gene': 'PIR60646', 'score': 0.21}]
chr10	GH10I028604	28604746	28607465	0.31	[{'connected_gene': 'WAC-AS1', 'score': 19.39}, {'connected_gene': 'WAC', 'score': 6.14}, {'connected_gene': 'PIR60646', 'score': 0.39}]
chr10	GH10I028529	28529555	28530858	0.43	[{'connected_gene': 'WAC-AS1', 'score': 25.53}, {'connected_gene': 'WAC', 'score': 9.85}, {'connected_gene': 'GC10M028522', 'score': 0.44}]
chr10	GH10I028550	28550052	28551818	0.54	[{'connected_gene': 'WAC-AS1', 'score': 17.23}, {'connected_gene': 'WAC', 'score': 0.37}, {'connected_gene': 'PIR60646', 'score': 0.2}]
chr10	GH10I028330	28330206	28335881	1.56	[{'connected_gene': 'MPP7', 'score': 564.65}, {'connected_gene': 'WAC', 'score': 2.01}, {'connected_gene': 'LOC105376467', 'score': 0.77}, {'connected_gene': 'LOC105376466', 'score': 0.31}]
chr10	GH10I028364	28364737	28369905	1.29	[{'connected_gene': 'MPP7', 'score': 24.46}, {'connected_gene': 'MKX-AS1', 'score': 10.23}, {'connected_gene': 'MKX', 'score': 10.23}, {'connected_gene': 'WAC', 'score': 1.4}, {'connected_gene': 'ZNF101P1', 'score': 0.31}, {'connected_gene': 'ENSG00000222666', 'score': 0.26}]
chr10	GH10I028496	28496062	28497034	0.86	[{'connected_gene': 'LOC105376468', 'score': 550.77}, {'connected_gene': 'WAC-AS1', 'score': 35.66}, {'connected_gene': 'WAC', 'score': 8.13}, {'connected_gene': 'GC10P028507', 'score': 0.39}]
chr10	GH10I028581	28581601	28583146	0.31	[{'connected_gene': 'PIR60646', 'score': 0.28}, {'connected_gene': 'WAC', 'score': 0.25}, {'connected_gene': 'WAC-AS1', 'score': 0.25}]
chr10	GH10I028587	28587199	28588395	1.04	[{'connected_gene': 'PIR60646', 'score': 0.29}, {'connected_gene': 'WAC', 'score': 0.22}, {'connected_gene': 'WAC-AS1', 'score': 0.22}]
chr10	GH10I028594	28594532	28594661	0.4	[{'connected_gene': 'PIR60646', 'score': 0.31}, {'connected_gene': 'WAC', 'score': 0.21}, {'connected_gene': 'WAC-AS1', 'score': 0.21}]
chr10	GH10I028617	28617691	28621907	0.49	[{'connected_gene': 'PIR60646', 'score': 550.77}, {'connected_gene': 'WAC-AS1', 'score': 40.15}, {'connected_gene': 'WAC', 'score': 8.89}]