PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000432190	[[24612886, 24613212], [24663281, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331]]
ENST00000222644	[[24612964, 24613212], [24663284, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24733812]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727233]]
ENST00000409761	[[24613033, 24613212], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727251]]	[[24689296, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727233]]
ENST00000396475	[[24613084, 24613212], [24659670, 24659839], [24663284, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24729159]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727233]]
ENST00000430180	[[24613631, 24613897], [24663284, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705679]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705679]]
ENST00000426450	[[24636738, 24636810], [24659670, 24659839], [24663284, 24663403], [24663680, 24663775], [24681334, 24681431]]	[[24663286, 24663403], [24663680, 24663689]]
ENST00000472674	[[24703092, 24703340], [24705206, 24705306], [24705639, 24705665]]	None
ENST00000464384	[[24705301, 24705306], [24705639, 24705708], [24706483, 24706601], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727495]]	[[24705301, 24705306], [24705639, 24705708], [24706483, 24706601], [24708117, 24708118]]
NM_001303037	[[24612964, 24613212], [24663284, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24733322]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727233]]
NM_016447	[[24612964, 24613212], [24659670, 24659839], [24663284, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24733322]]	[[24663286, 24663403], [24681334, 24681487], [24689230, 24689383], [24690103, 24690331], [24703208, 24703340], [24705206, 24705306], [24705639, 24705708], [24708117, 24708279], [24718749, 24718952], [24720010, 24720139], [24727056, 24727233]]

Promoter

Chrom	Start	End	Description
chr7	24612848	24612899	CAGE_peak_3_at_MPP6_5end
chr7	24612935	24612980	CAGE_peak_2_at_MPP6_5end
chr7	24613062	24613091	CAGE_peak_1_at_MPP6_5end
chr7	24613093	24613110	CAGE_peak_4_at_MPP6_5end
chr7	24636716	24636732	CAGE_peak_15_at_MPP6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I024437	24435362	24435511	0.38	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024406	24406902	24407131	0.43	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024392	24392402	24393368	0.51	[{'connected_gene': 'MPP6', 'score': 10.43}, {'connected_gene': 'GC07P024499', 'score': 0.14}, {'connected_gene': 'NPY', 'score': 0.14}]
chr7	GH07I024403	24403609	24404406	0.31	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024435	24435102	24435271	0.49	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024395	24395444	24396108	0.58	[{'connected_gene': 'MPP6', 'score': 10.44}, {'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.14}]
chr7	GH07I024408	24408153	24408319	0.31	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024436	24436339	24437019	0.38	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024441	24441148	24442678	0.49	[{'connected_gene': 'MPP6', 'score': 5.24}, {'connected_gene': 'GC07P024499', 'score': 0.22}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024405	24405624	24406520	0.58	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024774	24774242	24774369	0.33	[{'connected_gene': 'MPP6', 'score': 4.7}, {'connected_gene': 'OSBPL3', 'score': 1.51}, {'connected_gene': 'GSDME', 'score': 0.37}, {'connected_gene': 'SNRPCP19', 'score': 0.12}]
chr7	GH07I024572	24572019	24575324	1.86	[{'connected_gene': 'MPP6', 'score': 561.98}, {'connected_gene': 'GSDME', 'score': 6.49}, {'connected_gene': 'SUMO2P14', 'score': 0.37}]
chr7	GH07I024700	24700062	24700417	0.42	[{'connected_gene': 'MPP6', 'score': 18.76}, {'connected_gene': 'GSDME', 'score': 12.98}, {'connected_gene': 'GC07M024702', 'score': 0.77}, {'connected_gene': 'ENSG00000271330', 'score': 0.31}]
chr7	GH07I024751	24751928	24753070	0.2	[{'connected_gene': 'MPP6', 'score': 12.89}, {'connected_gene': 'GSDME', 'score': 10.41}, {'connected_gene': 'PIR41431', 'score': 0.28}]
chr7	GH07I024732	24732454	24734531	1.26	[{'connected_gene': 'MPP6', 'score': 16.83}, {'connected_gene': 'GSDME', 'score': 14.98}, {'connected_gene': 'PIR41431', 'score': 0.37}]
chr7	GH07I024609	24609186	24610100	0.38	[{'connected_gene': 'MPP6', 'score': 38.55}, {'connected_gene': 'SUMO2P14', 'score': 0.34}, {'connected_gene': 'ENSG00000271330', 'score': 0.21}]
chr7	GH07I024596	24596001	24596200	0.56	[{'connected_gene': 'MPP6', 'score': 27.8}, {'connected_gene': 'SUMO2P14', 'score': 0.44}, {'connected_gene': 'ENSG00000271330', 'score': 0.18}]
chr7	GH07I024665	24665742	24665931	0.57	[{'connected_gene': 'MPP6', 'score': 24.5}, {'connected_gene': 'ENSG00000271330', 'score': 0.44}, {'connected_gene': 'SUMO2P14', 'score': 0.18}]
chr7	GH07I024653	24653201	24654017	0.2	[{'connected_gene': 'MPP6', 'score': 11.98}, {'connected_gene': 'ENSG00000271330', 'score': 0.34}, {'connected_gene': 'SUMO2P14', 'score': 0.21}]
chr7	GH07I024575	24575802	24577194	0.92	[{'connected_gene': 'MPP6', 'score': 15.99}, {'connected_gene': 'SUMO2P14', 'score': 0.39}]
chr7	GH07I024475	24475702	24475851	0.38	[{'connected_gene': 'MPP6', 'score': 20.95}, {'connected_gene': 'RNU6-1103P', 'score': 11.46}, {'connected_gene': 'GC07P024499', 'score': 0.34}, {'connected_gene': 'NPY', 'score': 0.08}]
chr7	GH07I024476	24476887	24478830	1.08	[{'connected_gene': 'MPP6', 'score': 20.96}, {'connected_gene': 'RNU6-1103P', 'score': 11.47}, {'connected_gene': 'GC07P024499', 'score': 0.34}, {'connected_gene': 'NPY', 'score': 0.08}]
chr7	GH07I024668	24668520	24671093	0.86	[{'connected_gene': 'MPP6', 'score': 36.38}, {'connected_gene': 'RNU6-1103P', 'score': 10.04}, {'connected_gene': 'GSDME', 'score': 9.56}, {'connected_gene': 'ENSG00000271330', 'score': 0.77}, {'connected_gene': 'SUMO2P14', 'score': 0.18}]
chr7	GH07I024707	24707647	24709825	0.38	[{'connected_gene': 'GSDME', 'score': 22.94}, {'connected_gene': 'MPP6', 'score': 16.92}, {'connected_gene': 'OSBPL3', 'score': 5.34}, {'connected_gene': 'GC07M024702', 'score': 0.77}, {'connected_gene': 'PIR41431', 'score': 0.44}]
chr7	GH07I024725	24725302	24727291	0.73	[{'connected_gene': 'GSDME', 'score': 21.48}, {'connected_gene': 'MPP6', 'score': 16.84}, {'connected_gene': 'OSBPL3', 'score': 5.35}, {'connected_gene': 'PIR41431', 'score': 0.39}]
chr7	GH07I024778	24778073	24780145	1.4	[{'connected_gene': 'GSDME', 'score': 8.31}, {'connected_gene': 'MPP6', 'score': 7.46}, {'connected_gene': 'C7orf31', 'score': 1.17}, {'connected_gene': 'SNRPCP19', 'score': 0.13}]
chr7	GH07I024753	24753879	24758606	2.38	[{'connected_gene': 'GSDME', 'score': 578.83}, {'connected_gene': 'MPP6', 'score': 14.78}, {'connected_gene': 'C7orf31', 'score': 1.32}, {'connected_gene': 'PIR41431', 'score': 0.26}]
chr7	GH07I024718	24718209	24720425	0.72	[{'connected_gene': 'GSDME', 'score': 23.52}, {'connected_gene': 'MPP6', 'score': 16.83}, {'connected_gene': 'PIR41431', 'score': 0.77}]
chr7	GH07I024794	24794401	24794600	0.82	[{'connected_gene': 'C7orf31', 'score': 11.4}, {'connected_gene': 'GSDME', 'score': 5.77}, {'connected_gene': 'MPP6', 'score': 4.85}, {'connected_gene': 'SNRPCP19', 'score': 0.14}]
chr7	GH07I024587	24587942	24588111	0.57	[{'connected_gene': 'SUMO2P14', 'score': 550.77}, {'connected_gene': 'MPP6', 'score': 27.86}]
chr7	GH07I024580	24580662	24580811	0.77	[{'connected_gene': 'SUMO2P14', 'score': 0.44}, {'connected_gene': 'MPP6', 'score': 0.44}]
chr7	GH07I024595	24595842	24595991	0.57	[{'connected_gene': 'SUMO2P14', 'score': 0.44}, {'connected_gene': 'MPP6', 'score': 0.34}, {'connected_gene': 'ENSG00000271330', 'score': 0.18}]
chr7	GH07I024456	24456174	24457693	0.98	[{'connected_gene': 'RNU6-1103P', 'score': 10.99}, {'connected_gene': 'MPP6', 'score': 4.72}, {'connected_gene': 'GC07P024499', 'score': 0.26}, {'connected_gene': 'NPY', 'score': 0.09}]
chr7	GH07I024503	24503642	24503791	0.2	[{'connected_gene': 'RNU6-1103P', 'score': 11.56}, {'connected_gene': 'MPP6', 'score': 10.87}, {'connected_gene': 'GC07P024499', 'score': 0.77}, {'connected_gene': 'GC07P024537', 'score': 0.29}]
chr7	GH07I024701	24700558	24704001	0.66	[{'connected_gene': 'GC07M024702', 'score': 550.77}, {'connected_gene': 'MPP6', 'score': 24.47}, {'connected_gene': 'GSDME', 'score': 19.67}, {'connected_gene': 'OSBPL3', 'score': 5.43}, {'connected_gene': 'ENSG00000271330', 'score': 0.31}]
chr7	GH07I024715	24715540	24717316	0.76	[{'connected_gene': 'PIR41431', 'score': 550.77}, {'connected_gene': 'MPP6', 'score': 22.8}, {'connected_gene': 'GSDME', 'score': 19.81}]