PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000249299	[[117824085, 117824308], [117825707, 117825748], [117828331, 117828459], [117831965, 117832878]]	[[117824277, 117824308], [117825707, 117825748], [117828331, 117828459], [117831965, 117832056]]
ENST00000424702	[[117824197, 117824308], [117825707, 117825748], [117828331, 117832209]]	[[117824277, 117824308], [117825707, 117825748], [117828331, 117828463]]
ENST00000422760	[[117824209, 117825748], [117828331, 117828459], [117831965, 117832218]]	[[117825739, 117825748], [117828331, 117828459], [117831965, 117832056]]
ENST00000411938	[[117824220, 117824334], [117825700, 117825748], [117828331, 117828459]]	[[117824277, 117824334], [117825700, 117825748], [117828331, 117828459]]
NM_016200	[[117824085, 117824308], [117825707, 117825748], [117828331, 117828459], [117831965, 117844093]]	[[117824277, 117824308], [117825707, 117825748], [117828331, 117828459], [117831965, 117832056]]

Promoter

Chrom	Start	End	Description
chr7	117824159	117824202	CAGE_peak_2_at_NAA38_5end
chr7	117824210	117824230	CAGE_peak_1_at_NAA38_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I117871	117871461	117874136	1.88	[{'connected_gene': 'CTTNBP2', 'score': 561.76}, {'connected_gene': 'LOC101929527', 'score': 550.77}, {'connected_gene': 'LSM8', 'score': 14.61}, {'connected_gene': 'LOC105375469', 'score': 0.1}]
chr7	GH07I118214	118214001	118215200	1.22	[{'connected_gene': 'ANKRD7', 'score': 555.89}, {'connected_gene': 'LSM8', 'score': 29.02}]
chr7	GH07I117773	117773402	117774400	0.92	[{'connected_gene': 'LSM8', 'score': 30.07}, {'connected_gene': 'CTTNBP2', 'score': 9.98}, {'connected_gene': 'CAPZA2', 'score': 5.94}, {'connected_gene': 'CFTR', 'score': 4.88}, {'connected_gene': 'LOC105375469', 'score': 0.22}, {'connected_gene': 'LOC101929527', 'score': 0.15}]
chr7	GH07I118078	118078594	118081812	0.95	[{'connected_gene': 'LSM8', 'score': 17.3}, {'connected_gene': 'CTTNBP2', 'score': 9.82}, {'connected_gene': 'PIR57573', 'score': 0.18}, {'connected_gene': 'ENSG00000234826', 'score': 0.18}]
chr7	GH07I118311	118311061	118312288	1.2	[{'connected_gene': 'LSM8', 'score': 16.81}, {'connected_gene': 'ANKRD7', 'score': 4.86}, {'connected_gene': 'LOC102724495', 'score': 0.23}, {'connected_gene': 'LOC105375471', 'score': 0.13}]
chr7	GH07I118232	118232413	118233562	0.2	[{'connected_gene': 'LSM8', 'score': 8.56}, {'connected_gene': 'PIR33334', 'score': 0.44}, {'connected_gene': 'GC07P118225', 'score': 0.44}, {'connected_gene': 'ANKRD7', 'score': 0.37}, {'connected_gene': 'LOC102724495', 'score': 0.31}]
chr7	GH07I118195	118195967	118196116	0.6	[{'connected_gene': 'LSM8', 'score': 0.39}, {'connected_gene': 'ANKRD7', 'score': 0.37}]
chr7	GH07I117630	117630547	117630736	0.38	[{'connected_gene': 'LSM8', 'score': 18.27}, {'connected_gene': 'CFTR-AS1', 'score': 10.42}, {'connected_gene': 'ENSG00000083622', 'score': 0.37}, {'connected_gene': 'ENSG00000234001', 'score': 0.26}, {'connected_gene': 'CFTR', 'score': 0.1}]
chr7	GH07I118182	118182337	118186246	2.08	[{'connected_gene': 'LSM8', 'score': 583.93}, {'connected_gene': 'LOC105375470', 'score': 550.77}, {'connected_gene': 'ANKRD7', 'score': 7.45}]
chr7	GH07I117791	117791516	117792912	1.19	[{'connected_gene': 'LSM8', 'score': 12.92}, {'connected_gene': 'LOC105375469', 'score': 0.18}, {'connected_gene': 'CTTNBP2', 'score': 0.18}, {'connected_gene': 'LOC101929527', 'score': 0.18}]
chr7	GH07I118288	118288001	118288400	0.46	[{'connected_gene': 'LSM8', 'score': 5.56}, {'connected_gene': 'LOC102724495', 'score': 0.31}, {'connected_gene': 'ANKRD7', 'score': 0.19}, {'connected_gene': 'LOC105375471', 'score': 0.12}]
chr7	GH07I118152	118152017	118152856	0.2	[{'connected_gene': 'CFTR', 'score': 10.04}, {'connected_gene': 'LSM8', 'score': 5.14}, {'connected_gene': 'PIR57573', 'score': 0.77}, {'connected_gene': 'LOC105375470', 'score': 0.29}, {'connected_gene': 'ENSG00000234826', 'score': 0.11}]