Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000550241 [[54026509, 54026850], [54062931, 54062996]] None
ENST00000602871 [[54058949, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54069836, 54069899]] [[54059097, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066398]]
ENST00000394349 [[54058949, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54069836, 54070109]] [[54059097, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54069836, 54069976]]
ENST00000495596 [[54058954, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54067805]] None
ENST00000552242 [[54058954, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54067479, 54067596], [54069959, 54071192]] [[54067541, 54067596], [54069959, 54069976]]
ENST00000549164 [[54058966, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54070025, 54070182]] [[54059097, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066398]]
ENST00000338662 [[54058985, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54069959, 54071182]] [[54059097, 54059212], [54062931, 54063125], [54063654, 54063732], [54066359, 54066429], [54069959, 54069976]]
ENST00000549748 [[54059022, 54059212], [54062931, 54063125], [54063654, 54063898], [54066359, 54066429], [54069836, 54069866]] [[54063835, 54063898], [54066359, 54066398]]
ENST00000552120 [[54063005, 54063125], [54063654, 54064045]] None
Promoter
Chrom Start End Description
chr12 54066398 54066443 CAGE_peak_2_at_ATP5G2_5end
chr12 54069856 54069899 CAGE_peak_1_at_ATP5G2_5end
chr12 54070084 54070095 CAGE_peak_8_at_ATP5G2_5end
chr12 54070098 54070131 CAGE_peak_3_at_ATP5G2_5end
chr12 54070504 54070534 CAGE_peak_15_at_ATP5G2_5end
chr12 54070568 54070589 CAGE_peak_11_at_ATP5G2_5end
chr12 54071181 54071185 CAGE_peak_4_at_ATP5G2_5end
chr12 54071246 54071256 CAGE_peak_16_at_ATP5G2_5end
chr12 54071264 54071278 CAGE_peak_6_at_ATP5G2_5end
chr12 54071286 54071293 CAGE_peak_23_at_ATP5G2_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr12 GH12I053508 53508157 53509285 1.04 [{'connected_gene': 'NPFF', 'score': 550.77}, {'connected_gene': 'ATP5MC2', 'score': 14.83}, {'connected_gene': 'PIR52796', 'score': 0.77}, {'connected_gene': 'ENSG00000267281', 'score': 0.13}, {'connected_gene': 'ATF7', 'score': 0.13}]
chr12 GH12I053320 53320232 53322543 2.12 [{'connected_gene': 'AAAS', 'score': 596.07}, {'connected_gene': 'PIR33338', 'score': 550.77}, {'connected_gene': 'GC12M053328', 'score': 550.77}, {'connected_gene': 'GC12M053329', 'score': 550.77}, {'connected_gene': 'PIR38393', 'score': 550.77}, {'connected_gene': 'ESPL1', 'score': 32.16}, {'connected_gene': 'SP1', 'score': 25.07}, {'connected_gene': 'PCBP2', 'score': 22.4}, {'connected_gene': 'MAP3K12', 'score': 20.26}, {'connected_gene': 'ENSG00000258344', 'score': 19.08}, {'connected_gene': 'ZNF740', 'score': 18.83}, {'connected_gene': 'HNRNPA1', 'score': 13.85}, {'connected_gene': 'C12orf10', 'score': 12.42}, {'connected_gene': 'PFDN5', 'score': 12.39}, {'connected_gene': 'SP7', 'score': 12.29}, {'connected_gene': 'RARG', 'score': 11.29}, {'connected_gene': 'ENSG00000257808', 'score': 11.03}, {'connected_gene': 'AMHR2', 'score': 10.85}, {'connected_gene': 'ITGB7', 'score': 10.84}, {'connected_gene': 'CBX5', 'score': 10.82}, {'connected_gene': 'MFSD5', 'score': 10.55}, {'connected_gene': 'TARBP2', 'score': 10.13}, {'connected_gene': 'NPFF', 'score': 10.12}, {'connected_gene': 'LOC100652999', 'score': 9.8}, {'connected_gene': 'SOAT2', 'score': 9.78}, {'connected_gene': 'IGFBP6', 'score': 9.68}, {'connected_gene': 'ATP5MC2', 'score': 5.76}, {'connected_gene': 'GC12M053303', 'score': 0.77}, {'connected_gene': 'PIR50020', 'score': 0.39}]
chr12 GH12I053323 53323580 53326497 1.56 [{'connected_gene': 'AAAS', 'score': 562.7}, {'connected_gene': 'GC12M053303', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 15.68}, {'connected_gene': 'ATP5MC2', 'score': 14.74}, {'connected_gene': 'PCBP2', 'score': 13.66}, {'connected_gene': 'ENSG00000258344', 'score': 10.47}, {'connected_gene': 'ZNF740', 'score': 10.16}, {'connected_gene': 'LOC100652999', 'score': 9.8}, {'connected_gene': 'SP7', 'score': 0.34}]
chr12 GH12I053498 53498110 53503102 2.31 [{'connected_gene': 'MAP3K12', 'score': 572.18}, {'connected_gene': 'TARBP2', 'score': 550.77}, {'connected_gene': 'ENSG00000270175', 'score': 550.77}, {'connected_gene': 'ATF7', 'score': 54.76}, {'connected_gene': 'HNRNPA1', 'score': 50.22}, {'connected_gene': 'ZNF740', 'score': 48.42}, {'connected_gene': 'PCBP2', 'score': 40.85}, {'connected_gene': 'SP1', 'score': 38.51}, {'connected_gene': 'ENSG00000258344', 'score': 32.58}, {'connected_gene': 'AAAS', 'score': 30.21}, {'connected_gene': 'CBX5', 'score': 22.14}, {'connected_gene': 'LOC100652999', 'score': 21.76}, {'connected_gene': 'PRR13', 'score': 21.35}, {'connected_gene': 'CSAD', 'score': 21.07}, {'connected_gene': 'CALCOCO1', 'score': 20.5}, {'connected_gene': 'ATP5MC2', 'score': 17.46}, {'connected_gene': 'RARG', 'score': 14.3}, {'connected_gene': 'SPRYD3', 'score': 13.96}, {'connected_gene': 'IGFBP6', 'score': 13.31}, {'connected_gene': 'ENSG00000257605', 'score': 11.97}, {'connected_gene': 'COPZ1', 'score': 11.64}, {'connected_gene': 'EIF4B', 'score': 11.62}, {'connected_gene': 'PFDN5', 'score': 11.3}, {'connected_gene': 'TNS2', 'score': 11.08}, {'connected_gene': 'ENSG00000260470', 'score': 9.7}]
chr12 GH12I053530 53530167 53530386 0.22 [{'connected_gene': 'MAP3K12', 'score': 14.79}, {'connected_gene': 'ATF7', 'score': 14.17}, {'connected_gene': 'NPFF', 'score': 11.4}, {'connected_gene': 'TARBP2', 'score': 11.35}, {'connected_gene': 'ATP5MC2', 'score': 11.16}, {'connected_gene': 'AMHR2', 'score': 10.58}, {'connected_gene': 'C12orf10', 'score': 9.36}, {'connected_gene': 'AAAS', 'score': 9.28}, {'connected_gene': 'MFSD5', 'score': 9.21}, {'connected_gene': 'CALCOCO1', 'score': 1.71}, {'connected_gene': 'LOC100652999', 'score': 0.37}, {'connected_gene': 'LOC100419830', 'score': 0.26}, {'connected_gene': 'ENSG00000267281', 'score': 0.15}]
chr12 GH12I053294 53294424 53300934 2.3 [{'connected_gene': 'PFDN5', 'score': 550.77}, {'connected_gene': 'PIR44034', 'score': 550.77}, {'connected_gene': 'PIR39957', 'score': 550.77}, {'connected_gene': 'C12orf10', 'score': 550.77}, {'connected_gene': 'ESPL1', 'score': 48.18}, {'connected_gene': 'AAAS', 'score': 32.97}, {'connected_gene': 'ZNF740', 'score': 21.32}, {'connected_gene': 'ATP5MC2', 'score': 12.98}, {'connected_gene': 'ENSG00000257605', 'score': 12.66}, {'connected_gene': 'MFSD5', 'score': 11.47}, {'connected_gene': 'SP1', 'score': 11.36}, {'connected_gene': 'ITGB7', 'score': 11.23}, {'connected_gene': 'ENSG00000257808', 'score': 11.06}, {'connected_gene': 'HNRNPA1', 'score': 10.76}, {'connected_gene': 'PCBP2', 'score': 10.6}, {'connected_gene': 'TARBP2', 'score': 10.45}, {'connected_gene': 'ENSG00000258344', 'score': 10.32}, {'connected_gene': 'SOAT2', 'score': 10.32}, {'connected_gene': 'AMHR2', 'score': 9.6}, {'connected_gene': 'IGFBP6', 'score': 9.42}]
chr12 GH12I053537 53537538 53539614 1.18 [{'connected_gene': 'ATP5MC2', 'score': 17.9}, {'connected_gene': 'NPFF', 'score': 11.33}, {'connected_gene': 'MAP3K12', 'score': 11.31}, {'connected_gene': 'TARBP2', 'score': 11.31}, {'connected_gene': 'ATF7', 'score': 10.46}, {'connected_gene': 'AAAS', 'score': 9.27}, {'connected_gene': 'LOC100652999', 'score': 0.34}, {'connected_gene': 'LOC100419830', 'score': 0.28}, {'connected_gene': 'ENSG00000267281', 'score': 0.17}]
chr12 GH12I053657 53657644 53661266 1.54 [{'connected_gene': 'ATP5MC2', 'score': 17.26}, {'connected_gene': 'AAAS', 'score': 8.05}, {'connected_gene': 'PRR13', 'score': 4.49}, {'connected_gene': 'GC12P053677', 'score': 0.37}, {'connected_gene': 'GC12P053639', 'score': 0.34}]
chr12 GH12I053696 53696852 53697557 0.72 [{'connected_gene': 'ATP5MC2', 'score': 20.66}, {'connected_gene': 'AAAS', 'score': 7.49}, {'connected_gene': 'GC12M053723', 'score': 0.31}]
chr12 GH12I053617 53617002 53620199 1.29 [{'connected_gene': 'ATP5MC2', 'score': 18.81}, {'connected_gene': 'ENSG00000270175', 'score': 8.49}, {'connected_gene': 'PRR13', 'score': 5.38}, {'connected_gene': 'PFDN5', 'score': 5.29}, {'connected_gene': 'ENSG00000267281', 'score': 0.44}, {'connected_gene': 'ATF7', 'score': 0.44}, {'connected_gene': 'LOC100419830', 'score': 0.26}]
chr12 GH12I053601 53601201 53602600 0.9 [{'connected_gene': 'ATP5MC2', 'score': 16.15}, {'connected_gene': 'PRR13', 'score': 4.97}, {'connected_gene': 'ENSG00000267281', 'score': 0.34}, {'connected_gene': 'ATF7', 'score': 0.34}, {'connected_gene': 'LOC100419830', 'score': 0.31}]
chr12 GH12I053613 53613620 53614541 0.38 [{'connected_gene': 'ATP5MC2', 'score': 11.08}, {'connected_gene': 'PRR13', 'score': 5.24}, {'connected_gene': 'ENSG00000267281', 'score': 0.39}, {'connected_gene': 'ATF7', 'score': 0.39}, {'connected_gene': 'LOC100419830', 'score': 0.28}]
chr12 GH12I054050 54050388 54050623 0.63 [{'connected_gene': 'ATP5MC2', 'score': 2.76}, {'connected_gene': 'HOXC11', 'score': 2.07}, {'connected_gene': 'HOXC12', 'score': 1.93}, {'connected_gene': 'ATF7', 'score': 1.93}, {'connected_gene': 'FLJ12825', 'score': 0.44}, {'connected_gene': 'GC12P054078', 'score': 0.44}, {'connected_gene': 'PIR31123', 'score': 0.44}, {'connected_gene': 'HOXC4', 'score': 0.29}]
chr12 GH12I053560 53560164 53562880 1.19 [{'connected_gene': 'ATP5MC2', 'score': 24.72}, {'connected_gene': 'SP1', 'score': 19.47}, {'connected_gene': 'NPFF', 'score': 10.65}, {'connected_gene': 'MAP3K12', 'score': 10.63}, {'connected_gene': 'TARBP2', 'score': 10.63}, {'connected_gene': 'ATF7', 'score': 10.62}, {'connected_gene': 'PRR13', 'score': 5.25}, {'connected_gene': 'LOC100419830', 'score': 0.39}, {'connected_gene': 'LOC100652999', 'score': 0.25}, {'connected_gene': 'ENSG00000267281', 'score': 0.21}]
chr12 GH12I053563 53563429 53565479 0.2 [{'connected_gene': 'ATP5MC2', 'score': 28.94}, {'connected_gene': 'SP1', 'score': 20.56}, {'connected_gene': 'ATF7', 'score': 10.5}, {'connected_gene': 'NPFF', 'score': 10.35}, {'connected_gene': 'MAP3K12', 'score': 10.33}, {'connected_gene': 'TARBP2', 'score': 10.33}, {'connected_gene': 'CALCOCO1', 'score': 9.95}, {'connected_gene': 'LOC100419830', 'score': 0.39}, {'connected_gene': 'LOC100652999', 'score': 0.23}, {'connected_gene': 'ENSG00000267281', 'score': 0.21}]
chr12 GH12I053579 53579564 53580239 0.82 [{'connected_gene': 'ATP5MC2', 'score': 25.43}, {'connected_gene': 'SP1', 'score': 20.84}, {'connected_gene': 'ATF7', 'score': 10.8}, {'connected_gene': 'NPFF', 'score': 10.42}, {'connected_gene': 'TARBP2', 'score': 10.41}, {'connected_gene': 'MAP3K12', 'score': 10.41}, {'connected_gene': 'LOC100419830', 'score': 0.44}, {'connected_gene': 'ENSG00000267281', 'score': 0.25}]
chr12 GH12I053674 53674796 53680173 2.62 [{'connected_gene': 'ATP5MC2', 'score': 591.57}, {'connected_gene': 'GC12P053677', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 28.86}, {'connected_gene': 'ATF7', 'score': 20.58}, {'connected_gene': 'AAAS', 'score': 18.55}, {'connected_gene': 'ENSG00000257808', 'score': 10.97}, {'connected_gene': 'PCBP2', 'score': 10.58}, {'connected_gene': 'ZNF740', 'score': 10.39}, {'connected_gene': 'ENSG00000258344', 'score': 10.32}, {'connected_gene': 'RARG', 'score': 10.31}, {'connected_gene': 'ENSG00000260470', 'score': 10.3}, {'connected_gene': 'HNRNPA1', 'score': 10.28}, {'connected_gene': 'EIF4B', 'score': 9.79}, {'connected_gene': 'MAP3K12', 'score': 1.46}, {'connected_gene': 'CALCOCO1', 'score': 1.37}, {'connected_gene': 'CSAD', 'score': 1.2}, {'connected_gene': 'GC12M053723', 'score': 0.25}]
chr12 GH12I053593 53593462 53594627 0.58 [{'connected_gene': 'ATP5MC2', 'score': 11.44}, {'connected_gene': 'ATF7', 'score': 11.17}, {'connected_gene': 'NPFF', 'score': 9.83}, {'connected_gene': 'MAP3K12', 'score': 9.82}, {'connected_gene': 'TARBP2', 'score': 9.82}, {'connected_gene': 'AAAS', 'score': 8.13}, {'connected_gene': 'LOC100419830', 'score': 0.37}, {'connected_gene': 'ENSG00000267281', 'score': 0.29}]
chr12 GH12I053595 53595196 53598794 1.13 [{'connected_gene': 'ATP5MC2', 'score': 31.33}, {'connected_gene': 'ATF7', 'score': 11.19}, {'connected_gene': 'NPFF', 'score': 9.83}, {'connected_gene': 'MAP3K12', 'score': 9.81}, {'connected_gene': 'TARBP2', 'score': 9.81}, {'connected_gene': 'PRR13', 'score': 4.89}, {'connected_gene': 'LOC100419830', 'score': 0.34}, {'connected_gene': 'ENSG00000267281', 'score': 0.31}]
chr12 GH12I053585 53585272 53587165 0.43 [{'connected_gene': 'ATP5MC2', 'score': 30.9}, {'connected_gene': 'ATF7', 'score': 11.54}, {'connected_gene': 'NPFF', 'score': 10.72}, {'connected_gene': 'TARBP2', 'score': 10.7}, {'connected_gene': 'MAP3K12', 'score': 10.7}, {'connected_gene': 'LOC100419830', 'score': 0.39}, {'connected_gene': 'ENSG00000267281', 'score': 0.28}]
chr12 GH12I053568 53568472 53570854 1 [{'connected_gene': 'ATP5MC2', 'score': 30.55}, {'connected_gene': 'ATF7', 'score': 10.88}, {'connected_gene': 'MAP3K12', 'score': 10.14}, {'connected_gene': 'TARBP2', 'score': 10.14}, {'connected_gene': 'PRR13', 'score': 5.27}, {'connected_gene': 'LOC100419830', 'score': 0.77}, {'connected_gene': 'ENSG00000267281', 'score': 0.22}, {'connected_gene': 'LOC100652999', 'score': 0.22}]
chr12 GH12I053401 53401456 53401471 0.52 [{'connected_gene': 'ATP5MC2', 'score': 8.61}, {'connected_gene': 'ATF7', 'score': 2.07}, {'connected_gene': 'GC12M053411', 'score': 0.44}, {'connected_gene': 'PIR43704', 'score': 0.37}, {'connected_gene': 'SP1', 'score': 0.34}]
chr12 GH12I053544 53544957 53545146 0.54 [{'connected_gene': 'ATP5MC2', 'score': 18.19}, {'connected_gene': 'LOC100419830', 'score': 0.31}, {'connected_gene': 'LOC100652999', 'score': 0.29}, {'connected_gene': 'ENSG00000267281', 'score': 0.18}, {'connected_gene': 'ATF7', 'score': 0.18}]
chr12 GH12I053671 53671053 53671410 0.43 [{'connected_gene': 'ATP5MC2', 'score': 21.56}, {'connected_gene': 'GC12P053677', 'score': 0.44}, {'connected_gene': 'GC12P053639', 'score': 0.29}]
chr12 GH12I053702 53701677 53701806 0.72 [{'connected_gene': 'ATP5MC2', 'score': 0.34}, {'connected_gene': 'GC12M053723', 'score': 0.34}]
chr12 GH12I053701 53701877 53702026 0.82 [{'connected_gene': 'ATP5MC2', 'score': 0.34}, {'connected_gene': 'GC12M053723', 'score': 0.34}]
chr12 GH12I053695 53695377 53696800 1 [{'connected_gene': 'ATP5MC2', 'score': 21.19}, {'connected_gene': 'GC12M053723', 'score': 0.31}]
chr12 GH12I053971 53971821 54008664 2.82 [{'connected_gene': 'HOXC11', 'score': 559.87}, {'connected_gene': 'HOXC9', 'score': 555.62}, {'connected_gene': 'HOXC6', 'score': 555.15}, {'connected_gene': 'HOXC10', 'score': 553.5}, {'connected_gene': 'GC12P054010', 'score': 550.77}, {'connected_gene': 'GC12P054044', 'score': 550.77}, {'connected_gene': 'MIR196A2', 'score': 550.77}, {'connected_gene': 'HNRNPA1', 'score': 65.29}, {'connected_gene': 'ZNF740', 'score': 61.89}, {'connected_gene': 'ENSG00000258344', 'score': 51.35}, {'connected_gene': 'ATF7', 'score': 48.41}, {'connected_gene': 'PCBP2', 'score': 44.23}, {'connected_gene': 'MAP3K12', 'score': 41.97}, {'connected_gene': 'LOC100652999', 'score': 40.66}, {'connected_gene': 'SP1', 'score': 36.3}, {'connected_gene': 'CALCOCO1', 'score': 30.73}, {'connected_gene': 'AAAS', 'score': 29.63}, {'connected_gene': 'HOTAIR', 'score': 21.61}, {'connected_gene': 'HOXC4', 'score': 20.46}, {'connected_gene': 'CBX5', 'score': 19.84}, {'connected_gene': 'HOXC8', 'score': 17.52}, {'connected_gene': 'HOXC12', 'score': 15.13}, {'connected_gene': 'HOXC-AS1', 'score': 15.08}, {'connected_gene': 'HOXC13', 'score': 13.58}, {'connected_gene': 'EIF4B', 'score': 13.2}, {'connected_gene': 'RARG', 'score': 11.97}, {'connected_gene': 'HOXC13-AS', 'score': 11.72}, {'connected_gene': 'IGFBP6', 'score': 11.27}, {'connected_gene': 'HOXC5', 'score': 11.22}, {'connected_gene': 'MIR615', 'score': 11.17}, {'connected_gene': 'CSAD', 'score': 10.36}, {'connected_gene': 'NPFF', 'score': 10.31}, {'connected_gene': 'ENSG00000257808', 'score': 9.82}, {'connected_gene': 'TARBP2', 'score': 9.76}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'ENSG00000270175', 'score': 5.5}, {'connected_gene': 'ATP5MC2', 'score': 2.67}, {'connected_gene': 'PIR41189', 'score': 0.77}, {'connected_gene': 'ENSG00000273049', 'score': 0.77}, {'connected_gene': 'HOXC-AS3', 'score': 0.77}, {'connected_gene': 'GC12P054094', 'score': 0.77}, {'connected_gene': 'GC12P053988', 'score': 0.77}, {'connected_gene': 'HOXC-AS2', 'score': 0.44}, {'connected_gene': 'GC12P054014', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.39}, {'connected_gene': 'GC12P054098', 'score': 0.39}, {'connected_gene': 'GC12P053975', 'score': 0.37}]
chr12 GH12I053738 53738897 53739026 0.56 [{'connected_gene': 'HOXC6', 'score': 10.73}, {'connected_gene': 'ATP5MC2', 'score': 10.69}, {'connected_gene': 'ATF7', 'score': 9.9}, {'connected_gene': 'CALCOCO1', 'score': 0.39}, {'connected_gene': 'LOC105378250', 'score': 0.37}]
chr12 GH12I053744 53744197 53744266 0.31 [{'connected_gene': 'HOXC6', 'score': 10.73}, {'connected_gene': 'ATP5MC2', 'score': 10.68}, {'connected_gene': 'ATF7', 'score': 9.89}, {'connected_gene': 'LOC105378250', 'score': 0.39}, {'connected_gene': 'CALCOCO1', 'score': 0.37}]
chr12 GH12I053743 53743697 53743886 0.75 [{'connected_gene': 'HOXC6', 'score': 10.73}, {'connected_gene': 'ATP5MC2', 'score': 10.68}, {'connected_gene': 'ATF7', 'score': 9.89}, {'connected_gene': 'LOC105378250', 'score': 0.39}, {'connected_gene': 'CALCOCO1', 'score': 0.37}]
chr12 GH12I054009 54009200 54034991 3.17 [{'connected_gene': 'HOXC4', 'score': 558.95}, {'connected_gene': 'HOXC6', 'score': 555.05}, {'connected_gene': 'HOXC5', 'score': 552.94}, {'connected_gene': 'PIR59985', 'score': 550.77}, {'connected_gene': 'GC12P054093', 'score': 550.77}, {'connected_gene': 'PIR46464', 'score': 550.77}, {'connected_gene': 'PIR59725', 'score': 550.77}, {'connected_gene': 'PIR53546', 'score': 550.77}, {'connected_gene': 'GC12P054071', 'score': 550.77}, {'connected_gene': 'AAAS', 'score': 31.93}, {'connected_gene': 'ATF7', 'score': 29.85}, {'connected_gene': 'HNRNPA1', 'score': 26.25}, {'connected_gene': 'RARG', 'score': 22.78}, {'connected_gene': 'ENSG00000260470', 'score': 18.38}, {'connected_gene': 'ZNF740', 'score': 16.54}, {'connected_gene': 'HOXC8', 'score': 15.25}, {'connected_gene': 'SMUG1', 'score': 14.63}, {'connected_gene': 'PCBP2', 'score': 13.83}, {'connected_gene': 'IGFBP6', 'score': 13.28}, {'connected_gene': 'SP1', 'score': 13.16}, {'connected_gene': 'HOXC-AS1', 'score': 12.94}, {'connected_gene': 'CBX5', 'score': 12.87}, {'connected_gene': 'ENSG00000258344', 'score': 12.83}, {'connected_gene': 'ENSG00000270175', 'score': 12.05}, {'connected_gene': 'CSAD', 'score': 12.01}, {'connected_gene': 'COPZ1', 'score': 11.45}, {'connected_gene': 'PFDN5', 'score': 11.25}, {'connected_gene': 'MAP3K12', 'score': 10.91}, {'connected_gene': 'FLJ12825', 'score': 7.56}, {'connected_gene': 'HOXC9', 'score': 6.88}, {'connected_gene': 'LINC02381', 'score': 5.62}, {'connected_gene': 'ATP5MC2', 'score': 2.82}, {'connected_gene': 'HOXC10', 'score': 2.25}, {'connected_gene': 'PIR45911', 'score': 0.77}, {'connected_gene': 'PIR33391', 'score': 0.77}, {'connected_gene': 'PIR50530', 'score': 0.77}, {'connected_gene': 'PIR57300', 'score': 0.77}, {'connected_gene': 'GC12M054068', 'score': 0.77}, {'connected_gene': 'PIR46275', 'score': 0.77}, {'connected_gene': 'GC12M054069', 'score': 0.77}, {'connected_gene': 'ENSG00000260597', 'score': 0.77}, {'connected_gene': 'PIR60886', 'score': 0.77}, {'connected_gene': 'ENSG00000273046', 'score': 0.77}, {'connected_gene': 'PIR54946', 'score': 0.77}, {'connected_gene': 'PIR48298', 'score': 0.44}, {'connected_gene': 'PIR34386', 'score': 0.44}, {'connected_gene': 'GC12P054063', 'score': 0.44}, {'connected_gene': 'GC12M054067', 'score': 0.44}, {'connected_gene': 'GC12P054097', 'score': 0.44}, {'connected_gene': 'PIR34718', 'score': 0.44}, {'connected_gene': 'PIR54432', 'score': 0.44}, {'connected_gene': 'PIR33335', 'score': 0.44}, {'connected_gene': 'PIR59819', 'score': 0.44}, {'connected_gene': 'GC12P054054', 'score': 0.39}, {'connected_gene': 'GC12P054096', 'score': 0.39}, {'connected_gene': 'MIR615', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.37}, {'connected_gene': 'ENSG00000273049', 'score': 0.28}]
chr12 GH12I053664 53664314 53665072 0.84 [{'connected_gene': 'HNRNPA1', 'score': 95.32}, {'connected_gene': 'ZNF740', 'score': 93.51}, {'connected_gene': 'AAAS', 'score': 80.36}, {'connected_gene': 'ATF7', 'score': 79.73}, {'connected_gene': 'TARBP2', 'score': 49.66}, {'connected_gene': 'ENSG00000258344', 'score': 43.29}, {'connected_gene': 'CSAD', 'score': 37.99}, {'connected_gene': 'SP1', 'score': 33.58}, {'connected_gene': 'ATP5MC2', 'score': 32.41}, {'connected_gene': 'PCBP2', 'score': 32.12}, {'connected_gene': 'CBX5', 'score': 30.88}, {'connected_gene': 'LOC100652999', 'score': 30.58}, {'connected_gene': 'ENSG00000257808', 'score': 27.75}, {'connected_gene': 'RARG', 'score': 22.8}, {'connected_gene': 'IGFBP6', 'score': 21.4}, {'connected_gene': 'PFDN5', 'score': 21.24}, {'connected_gene': 'CALCOCO1', 'score': 19.81}, {'connected_gene': 'NPFF', 'score': 18.73}, {'connected_gene': 'ENSG00000260470', 'score': 18.3}, {'connected_gene': 'MAP3K12', 'score': 14.95}, {'connected_gene': 'TNS2', 'score': 11.06}, {'connected_gene': 'ENSG00000257596', 'score': 10.53}, {'connected_gene': 'EIF4B', 'score': 9.79}, {'connected_gene': 'GC12P053677', 'score': 0.39}, {'connected_gene': 'GC12P053639', 'score': 0.31}]
chr12 GH12I053348 53348398 53349546 0.43 [{'connected_gene': 'SP1', 'score': 32.39}, {'connected_gene': 'ESPL1', 'score': 19.75}, {'connected_gene': 'SP7', 'score': 17.37}, {'connected_gene': 'ATP5MC2', 'score': 6.95}]
chr12 GH12I053364 53364632 53367384 1.36 [{'connected_gene': 'SP1', 'score': 34.82}, {'connected_gene': 'ENSG00000270175', 'score': 12.47}, {'connected_gene': 'AAAS', 'score': 10.15}, {'connected_gene': 'PRR13', 'score': 7.34}, {'connected_gene': 'ATP5MC2', 'score': 5.22}, {'connected_gene': 'PFDN5', 'score': 4.3}, {'connected_gene': 'SP7', 'score': 0.34}]
chr12 GH12I053386 53386001 53392339 1.27 [{'connected_gene': 'SP1', 'score': 28.22}, {'connected_gene': 'AAAS', 'score': 15.83}, {'connected_gene': 'SMUG1', 'score': 14.56}, {'connected_gene': 'PRR13', 'score': 14.06}, {'connected_gene': 'ATP5MC2', 'score': 6.29}, {'connected_gene': 'ESPL1', 'score': 5.02}, {'connected_gene': 'PIR43704', 'score': 0.44}, {'connected_gene': 'GC12M053411', 'score': 0.37}]
chr12 GH12I053417 53417173 53418146 0.83 [{'connected_gene': 'SP1', 'score': 25.09}, {'connected_gene': 'AAAS', 'score': 20.15}, {'connected_gene': 'SP7', 'score': 12.38}, {'connected_gene': 'MAP3K12', 'score': 10.67}, {'connected_gene': 'TARBP2', 'score': 10.67}, {'connected_gene': 'NPFF', 'score': 10.66}, {'connected_gene': 'C12orf10', 'score': 10.38}, {'connected_gene': 'PFDN5', 'score': 10.38}, {'connected_gene': 'ATP5MC2', 'score': 4.73}, {'connected_gene': 'GC12P053422', 'score': 0.44}, {'connected_gene': 'GC12M053411', 'score': 0.44}]
chr12 GH12I053543 53543077 53544417 0.94 [{'connected_gene': 'SP1', 'score': 19.14}, {'connected_gene': 'ATP5MC2', 'score': 18.16}, {'connected_gene': 'LOC100652999', 'score': 0.31}, {'connected_gene': 'LOC100419830', 'score': 0.29}, {'connected_gene': 'ENSG00000267281', 'score': 0.18}, {'connected_gene': 'ATF7', 'score': 0.18}]
chr12 GH12I053665 53665127 53666145 0.31 [{'connected_gene': 'SP1', 'score': 14.71}, {'connected_gene': 'ATF7', 'score': 10.98}, {'connected_gene': 'PRR13', 'score': 4.57}, {'connected_gene': 'ATP5MC2', 'score': 0.39}, {'connected_gene': 'GC12P053677', 'score': 0.39}, {'connected_gene': 'GC12P053639', 'score': 0.31}]
chr12 GH12I053344 53344388 53346622 1.69 [{'connected_gene': 'SP7', 'score': 567.47}, {'connected_gene': 'SP1', 'score': 34.68}, {'connected_gene': 'ZNF740', 'score': 23.08}, {'connected_gene': 'ESPL1', 'score': 19.84}, {'connected_gene': 'HNRNPA1', 'score': 19.65}, {'connected_gene': 'PCBP2', 'score': 19.4}, {'connected_gene': 'ENSG00000258344', 'score': 19.15}, {'connected_gene': 'ATF7', 'score': 15.22}, {'connected_gene': 'EIF4B', 'score': 13.23}, {'connected_gene': 'AAAS', 'score': 12.78}, {'connected_gene': 'CALCOCO1', 'score': 12.09}, {'connected_gene': 'RARG', 'score': 12.07}, {'connected_gene': 'IGFBP6', 'score': 11.31}, {'connected_gene': 'ENSG00000257808', 'score': 11.02}, {'connected_gene': 'C12orf10', 'score': 10.66}, {'connected_gene': 'PFDN5', 'score': 10.37}, {'connected_gene': 'LOC100652999', 'score': 9.87}, {'connected_gene': 'ATP5MC2', 'score': 6.58}]
chr12 GH12I053566 53566009 53566998 0.31 [{'connected_gene': 'ATF7', 'score': 10.43}, {'connected_gene': 'NPFF', 'score': 10.35}, {'connected_gene': 'MAP3K12', 'score': 10.33}, {'connected_gene': 'TARBP2', 'score': 10.33}, {'connected_gene': 'ATP5MC2', 'score': 10.27}, {'connected_gene': 'PRR13', 'score': 5.15}, {'connected_gene': 'LOC100419830', 'score': 0.44}, {'connected_gene': 'LOC100652999', 'score': 0.23}, {'connected_gene': 'ENSG00000267281', 'score': 0.22}]
chr12 GH12I053739 53739376 53739713 0.94 [{'connected_gene': 'ATF7', 'score': 23.19}, {'connected_gene': 'MAP3K12', 'score': 16.84}, {'connected_gene': 'SP1', 'score': 15.59}, {'connected_gene': 'ATP5MC2', 'score': 15.15}, {'connected_gene': 'PCBP2', 'score': 14.47}, {'connected_gene': 'ZNF740', 'score': 14.46}, {'connected_gene': 'ENSG00000258344', 'score': 13.8}, {'connected_gene': 'LOC100652999', 'score': 13.44}, {'connected_gene': 'AAAS', 'score': 12.27}, {'connected_gene': 'HNRNPA1', 'score': 11.84}, {'connected_gene': 'CALCOCO1', 'score': 11.04}, {'connected_gene': 'HOXC6', 'score': 10.73}, {'connected_gene': 'CSAD', 'score': 10.37}, {'connected_gene': 'NPFF', 'score': 10.34}, {'connected_gene': 'ENSG00000257808', 'score': 9.82}, {'connected_gene': 'LOC105378250', 'score': 0.39}]
chr12 GH12I053572 53572011 53572791 0.43 [{'connected_gene': 'ATF7', 'score': 10.89}, {'connected_gene': 'ATP5MC2', 'score': 10.72}, {'connected_gene': 'TARBP2', 'score': 10.12}, {'connected_gene': 'MAP3K12', 'score': 10.12}, {'connected_gene': 'LOC100419830', 'score': 0.77}, {'connected_gene': 'ENSG00000267281', 'score': 0.23}, {'connected_gene': 'LOC100652999', 'score': 0.22}]
chr12 GH12I053591 53591402 53592321 0.96 [{'connected_gene': 'ATF7', 'score': 11.31}, {'connected_gene': 'ATP5MC2', 'score': 11.26}, {'connected_gene': 'LOC100419830', 'score': 0.37}, {'connected_gene': 'ENSG00000267281', 'score': 0.29}]
chr12 GH12I053622 53622655 53627614 2.3 [{'connected_gene': 'ATF7', 'score': 571.51}, {'connected_gene': 'ENSG00000267281', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 32.46}, {'connected_gene': 'EIF4B', 'score': 26.03}, {'connected_gene': 'ATP5MC2', 'score': 20.54}, {'connected_gene': 'PCBP2', 'score': 19.41}, {'connected_gene': 'AAAS', 'score': 18.79}, {'connected_gene': 'ITGB7', 'score': 15.63}, {'connected_gene': 'HNRNPA1', 'score': 15.59}, {'connected_gene': 'ENSG00000258344', 'score': 14.66}, {'connected_gene': 'ZNF740', 'score': 14.43}, {'connected_gene': 'LOC100652999', 'score': 12.16}, {'connected_gene': 'COPZ1', 'score': 11.75}, {'connected_gene': 'CALCOCO1', 'score': 10.87}, {'connected_gene': 'HOXC6', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.6}, {'connected_gene': 'HOXC9', 'score': 10.58}, {'connected_gene': 'HOXC8', 'score': 10.18}, {'connected_gene': 'ENSG00000257808', 'score': 9.77}, {'connected_gene': 'PRR13', 'score': 5.22}, {'connected_gene': 'LOC100419830', 'score': 0.23}]
chr12 GH12I053753 53753691 53754866 0.92 [{'connected_gene': 'LOC105378250', 'score': 550.77}, {'connected_gene': 'ATP5MC2', 'score': 4.85}, {'connected_gene': 'HOXC4', 'score': 2.95}, {'connected_gene': 'ESPL1', 'score': 1.54}, {'connected_gene': 'CISTR', 'score': 0.77}, {'connected_gene': 'CALCOCO1', 'score': 0.31}]
chr12 GH12I053755 53755677 53756211 0.8 [{'connected_gene': 'LOC105378250', 'score': 550.77}, {'connected_gene': 'CISTR', 'score': 550.77}, {'connected_gene': 'PCBP2', 'score': 1.7}, {'connected_gene': 'ATP5MC2', 'score': 1.54}, {'connected_gene': 'HOXC11', 'score': 1.23}, {'connected_gene': 'HOXC13', 'score': 1.22}]
chr12 GH12I053756 53756480 53757817 1.03 [{'connected_gene': 'CISTR', 'score': 550.77}, {'connected_gene': 'PCBP2', 'score': 14.95}, {'connected_gene': 'SP1', 'score': 14.59}, {'connected_gene': 'ENSG00000258344', 'score': 12.23}, {'connected_gene': 'CALCOCO1', 'score': 11.54}, {'connected_gene': 'AAAS', 'score': 10.96}, {'connected_gene': 'HNRNPA1', 'score': 10.88}, {'connected_gene': 'ATF7', 'score': 10.8}, {'connected_gene': 'MIR196A2', 'score': 10.55}, {'connected_gene': 'LOC100652999', 'score': 10.47}, {'connected_gene': 'ATP5MC2', 'score': 10.28}, {'connected_gene': 'ZNF740', 'score': 10.21}, {'connected_gene': 'LOC105378250', 'score': 0.77}, {'connected_gene': 'GC12M053768', 'score': 0.39}]
chr12 GH12I053575 53575097 53577446 1.05 [{'connected_gene': 'LOC100419830', 'score': 550.77}, {'connected_gene': 'ATF7', 'score': 10.79}, {'connected_gene': 'ATP5MC2', 'score': 10.48}, {'connected_gene': 'NPFF', 'score': 10.43}, {'connected_gene': 'MAP3K12', 'score': 10.41}, {'connected_gene': 'TARBP2', 'score': 10.41}, {'connected_gene': 'PRR13', 'score': 5.15}, {'connected_gene': 'ENSG00000267281', 'score': 0.25}]
chr12 GH12I053243 53243033 53243060 0.22 [{'connected_gene': 'ENSG00000283536', 'score': 550.77}, {'connected_gene': 'ATP5MC2', 'score': 2.2}, {'connected_gene': 'TNS2', 'score': 1.43}, {'connected_gene': 'MFSD5', 'score': 0.44}]
chr12 GH12I053834 53834391 53834588 0.22 [{'connected_gene': 'GC12P053834', 'score': 550.77}, {'connected_gene': 'HOXC11', 'score': 10.37}, {'connected_gene': 'HOTAIR', 'score': 10.36}, {'connected_gene': 'ATP5MC2', 'score': 2.56}, {'connected_gene': 'GC12P053837', 'score': 0.77}]
chr12 GH12I053464 53464416 53465685 0.49 [{'connected_gene': 'ENSG00000273658', 'score': 550.77}, {'connected_gene': 'PCBP2-OT1', 'score': 550.77}, {'connected_gene': 'PRR13', 'score': 12.96}, {'connected_gene': 'MAP3K12', 'score': 11.7}, {'connected_gene': 'TARBP2', 'score': 11.7}, {'connected_gene': 'AMHR2', 'score': 11.6}, {'connected_gene': 'NPFF', 'score': 11.29}, {'connected_gene': 'AAAS', 'score': 10.74}, {'connected_gene': 'ATP5MC2', 'score': 9.26}, {'connected_gene': 'PCBP2', 'score': 0.39}, {'connected_gene': 'ENSG00000257379', 'score': 0.34}]

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