PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000439351	[[186285191, 186285385], [186287951, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303589]]	[[186288686, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303197]]
ENST00000265028	[[186288466, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303588]]	[[186288686, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303197]]
ENST00000464877	[[186289892, 186290040], [186293628, 186293726], [186295456, 186295849]]	None
ENST00000495390	[[186296086, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303582]]	None
ENST00000418776	[[186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303170], [186314842, 186314892]]	[[186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303170], [186314842, 186314892]]
ENST00000538831	[[186314752, 186315061]]	[[186314764, 186314992]]
NM_016306	[[186288464, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303589]]	[[186288686, 186288754], [186289883, 186290040], [186293628, 186293726], [186295456, 186295589], [186299159, 186299302], [186299783, 186299866], [186300504, 186300562], [186301653, 186301765], [186302218, 186302378], [186303132, 186303197]]

Promoter

Chrom	Start	End	Description
chr3	186285211	186285229	CAGE_peak_3_at_DNAJB11_5end
chr3	186288454	186288535	CAGE_peak_1_at_DNAJB11_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I186570	186569530	186571861	2.06	[{'connected_gene': 'TBCCD1', 'score': 591.33}, {'connected_gene': 'DNAJB11', 'score': 550.77}, {'connected_gene': 'TRA2B', 'score': 74.57}, {'connected_gene': 'ENSG00000200418', 'score': 32.15}, {'connected_gene': 'SNORA4', 'score': 27.24}, {'connected_gene': 'SNORA81', 'score': 20.56}, {'connected_gene': 'RFC4', 'score': 11.98}, {'connected_gene': 'RPS20P14', 'score': 10.31}, {'connected_gene': 'SNORA63', 'score': 9.73}, {'connected_gene': 'CRYGS', 'score': 5.07}, {'connected_gene': 'ENSG00000283149', 'score': 0.39}]
chr3	GH03I186566	186566261	186568529	2.03	[{'connected_gene': 'TBCCD1', 'score': 575.74}, {'connected_gene': 'DNAJB11', 'score': 550.77}, {'connected_gene': 'TRA2B', 'score': 30.63}, {'connected_gene': 'RFC4', 'score': 11.5}, {'connected_gene': 'ENSG00000200418', 'score': 10.32}, {'connected_gene': 'SNORA4', 'score': 10.0}, {'connected_gene': 'PIR33054', 'score': 0.39}]
chr3	GH03I186569	186569001	186569200	0.31	[{'connected_gene': 'DNAJB11', 'score': 550.77}, {'connected_gene': 'TBCCD1', 'score': 550.77}]
chr3	GH03I186593	186593409	186595286	0.76	[{'connected_gene': 'FETUB', 'score': 10.4}, {'connected_gene': 'KNG1', 'score': 10.35}, {'connected_gene': 'RFC4', 'score': 9.93}, {'connected_gene': 'ENSG00000231724', 'score': 9.8}, {'connected_gene': 'HRG', 'score': 9.75}, {'connected_gene': 'DNAJB11', 'score': 4.76}, {'connected_gene': 'LOC100287402', 'score': 0.77}, {'connected_gene': 'ENSG00000283149', 'score': 0.39}, {'connected_gene': 'LOC105374258', 'score': 0.1}]
chr3	GH03I186187	186187014	186188553	0.43	[{'connected_gene': 'ETV5', 'score': 11.3}, {'connected_gene': 'ETV5-AS1', 'score': 10.34}, {'connected_gene': 'DNAJB11', 'score': 4.93}, {'connected_gene': 'GC03P186167', 'score': 0.34}, {'connected_gene': 'DGKG', 'score': 0.09}]
chr3	GH03I186588	186588296	186591531	1.07	[{'connected_gene': 'AHSG', 'score': 12.3}, {'connected_gene': 'SNORD2', 'score': 10.75}, {'connected_gene': 'EIF4A2', 'score': 10.75}, {'connected_gene': 'ENSG00000200418', 'score': 10.75}, {'connected_gene': 'SNORA63', 'score': 10.75}, {'connected_gene': 'SNORA81', 'score': 10.75}, {'connected_gene': 'RFC4', 'score': 10.4}, {'connected_gene': 'ENSG00000231724', 'score': 10.4}, {'connected_gene': 'FETUB', 'score': 10.38}, {'connected_gene': 'KNG1', 'score': 10.35}, {'connected_gene': 'HRG', 'score': 10.04}, {'connected_gene': 'DNAJB11', 'score': 5.51}, {'connected_gene': 'CRYGS', 'score': 5.07}, {'connected_gene': 'LOC100287402', 'score': 0.44}, {'connected_gene': 'ENSG00000283149', 'score': 0.44}, {'connected_gene': 'LOC105374258', 'score': 0.09}]
chr3	GH03I186024	186024109	186024925	0.4	[{'connected_gene': 'ETV5-AS1', 'score': 10.68}, {'connected_gene': 'ETV5', 'score': 10.62}, {'connected_gene': 'KNG1', 'score': 9.95}, {'connected_gene': 'AHSG', 'score': 9.49}, {'connected_gene': 'HRG', 'score': 8.95}, {'connected_gene': 'DNAJB11', 'score': 4.8}, {'connected_gene': 'GC03P186008', 'score': 0.37}, {'connected_gene': 'ENSG00000277118', 'score': 0.23}]