PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr16	47495201	47495215	CAGE_peak_2_at_PHKB_5end
chr16	47495225	47495259	CAGE_peak_1_at_PHKB_5end
chr16	47495272	47495279	CAGE_peak_4_at_PHKB_5end
chr16	47495282	47495293	CAGE_peak_3_at_PHKB_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I047573	47573488	47575308	0.79	[{'connected_gene': 'LONP2', 'score': 4.09}, {'connected_gene': 'EIF4BP5', 'score': 0.44}, {'connected_gene': 'GC16M047600', 'score': 0.34}, {'connected_gene': 'PHKB', 'score': 0.14}]
chr16	GH16I047523	47523133	47524304	1.02	[{'connected_gene': 'ITFG1', 'score': 10.52}, {'connected_gene': 'PHKB', 'score': 10.5}, {'connected_gene': 'SHCBP1', 'score': 5.06}, {'connected_gene': 'ENSG00000262038', 'score': 0.44}, {'connected_gene': 'RNA5SP425', 'score': 0.37}]
chr16	GH16I047459	47459225	47464187	2.26	[{'connected_gene': 'ITFG1', 'score': 550.77}, {'connected_gene': 'PHKB', 'score': 550.77}, {'connected_gene': 'ENSG00000261131', 'score': 22.99}, {'connected_gene': 'SIAH1', 'score': 11.22}, {'connected_gene': 'SHCBP1', 'score': 4.89}, {'connected_gene': 'GPT2', 'score': 4.44}, {'connected_gene': 'LONP2', 'score': 4.0}]
chr16	GH16I047617	47617830	47617979	0.6	[{'connected_gene': 'ITFG1', 'score': 10.69}, {'connected_gene': 'PHKB', 'score': 10.68}, {'connected_gene': 'PIR31968', 'score': 0.37}, {'connected_gene': 'NDUFA5P11', 'score': 0.37}]
chr16	GH16I047643	47643124	47644485	0.49	[{'connected_gene': 'ITFG1', 'score': 10.62}, {'connected_gene': 'PHKB', 'score': 10.61}, {'connected_gene': 'PIR31968', 'score': 0.44}, {'connected_gene': 'LINC02133', 'score': 0.18}]
chr16	GH16I047475	47475148	47476520	0.85	[{'connected_gene': 'ITFG1', 'score': 0.39}, {'connected_gene': 'PHKB', 'score': 0.39}, {'connected_gene': 'PIR32661', 'score': 0.31}]
chr16	GH16I047470	47470502	47471306	0.67	[{'connected_gene': 'ITFG1', 'score': 0.44}, {'connected_gene': 'PHKB', 'score': 0.44}, {'connected_gene': 'PIR32661', 'score': 0.29}]
chr16	GH16I047467	47467477	47469144	1.14	[{'connected_gene': 'ITFG1', 'score': 0.77}, {'connected_gene': 'PHKB', 'score': 0.44}, {'connected_gene': 'PIR32661', 'score': 0.28}]
chr16	GH16I047464	47464201	47464600	0.88	[{'connected_gene': 'ITFG1', 'score': 550.77}, {'connected_gene': 'PHKB', 'score': 0.77}, {'connected_gene': 'PIR32661', 'score': 0.26}]
chr16	GH16I047491	47491233	47494833	1.49	[{'connected_gene': 'PHKB', 'score': 5.7}, {'connected_gene': 'LONP2', 'score': 4.11}, {'connected_gene': 'SHCBP1', 'score': 3.66}, {'connected_gene': 'PIR32661', 'score': 0.39}, {'connected_gene': 'ITFG1', 'score': 0.31}]
chr16	GH16I047457	47457700	47458383	0.31	[{'connected_gene': 'PHKB', 'score': 0.77}, {'connected_gene': 'ITFG1', 'score': 0.44}, {'connected_gene': 'RNA5SP424', 'score': 0.44}]
chr16	GH16I047566	47566601	47566800	0.2	[{'connected_gene': 'EIF4BP5', 'score': 550.77}, {'connected_gene': 'ITFG1', 'score': 10.71}, {'connected_gene': 'PHKB', 'score': 10.71}, {'connected_gene': 'LOC100420642', 'score': 0.77}]
chr16	GH16I047565	47565001	47566199	0.77	[{'connected_gene': 'EIF4BP5', 'score': 550.77}, {'connected_gene': 'ITFG1', 'score': 10.71}, {'connected_gene': 'PHKB', 'score': 10.71}, {'connected_gene': 'LOC100420642', 'score': 0.77}]
chr16	GH16I047567	47567810	47569083	0.31	[{'connected_gene': 'EIF4BP5', 'score': 550.77}, {'connected_gene': 'ITFG1', 'score': 10.81}, {'connected_gene': 'PHKB', 'score': 10.81}, {'connected_gene': 'GC16M047600', 'score': 0.29}]
chr16	GH16I047572	47572790	47572939	0.2	[{'connected_gene': 'EIF4BP5', 'score': 0.44}, {'connected_gene': 'GC16M047600', 'score': 0.31}, {'connected_gene': 'PHKB', 'score': 0.14}]
chr16	GH16I047627	47627130	47627279	0.31	[{'connected_gene': 'PIR31968', 'score': 0.39}, {'connected_gene': 'NDUFA5P11', 'score': 0.31}, {'connected_gene': 'PHKB', 'score': 0.1}]
chr16	GH16I047503	47503731	47505151	0.43	[{'connected_gene': 'PIR32661', 'score': 550.77}, {'connected_gene': 'RNA5SP425', 'score': 550.77}, {'connected_gene': 'ITFG1', 'score': 11.53}, {'connected_gene': 'PHKB', 'score': 11.53}, {'connected_gene': 'GPT2', 'score': 4.19}]
chr16	GH16I047520	47520410	47520559	0.78	[{'connected_gene': 'ENSG00000262038', 'score': 0.44}, {'connected_gene': 'RNA5SP425', 'score': 0.37}, {'connected_gene': 'PHKB', 'score': 0.22}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000566037	[[47495033, 47495337], [47497809, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581458]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581458]]
ENST00000566044	[[47495205, 47495337], [47497792, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733656]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]
ENST00000455779	[[47495209, 47495337], [47497792, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47735434]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]
ENST00000299167	[[47495236, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47735434]]	[[47495261, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]
ENST00000323584	[[47495237, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47734254]]	[[47495261, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]
ENST00000565424	[[47495241, 47495337], [47581343, 47582075]]	None
ENST00000567402	[[47495246, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47624215, 47624749]]	None
ENST00000570047	[[47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47596308, 47596406], [47614205, 47614269], [47621578, 47621669]]	[[47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47596308, 47596327]]
ENST00000566275	[[47694613, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47709496, 47710320]]	[[47694613, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47709496, 47709578]]
ENST00000566319	[[47698700, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47734259]]	None
ENST00000566721	[[47495239, 47495337], [47497008, 47497433]]	None
ENST00000563376	[[47495260, 47495337], [47496251, 47496363], [47497792, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545642]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545642]]
ENST00000567200	[[47496022, 47496363], [47497809, 47497880]]	[[47497849, 47497880]]
ENST00000564873	[[47496577, 47497904], [47531309, 47531399], [47533666, 47533742]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533742]]
ENST00000566436	[[47628060, 47628125], [47630283, 47630442], [47631714, 47631947]]	None
ENST00000568439	[[47630338, 47630442], [47644736, 47644831], [47653040, 47653340]]	[[47630338, 47630442], [47644736, 47644831], [47653040, 47653070]]
ENST00000568171	[[47684740, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47698301]]	None
ENST00000564711	[[47730382, 47730399], [47732358, 47732499], [47733066, 47733605]]	[[47730382, 47730399], [47732358, 47732499], [47733066, 47733144]]
NM_000293	[[47495209, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47735434]]	[[47495261, 47495337], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47698795, 47698886], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]
NM_001031835	[[47495209, 47495337], [47497792, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47735434]]	[[47497849, 47497904], [47531309, 47531399], [47533666, 47533805], [47536901, 47537001], [47545575, 47545683], [47549431, 47549512], [47581343, 47581459], [47614205, 47614269], [47621578, 47621674], [47622815, 47623013], [47627410, 47627468], [47628047, 47628125], [47630283, 47630442], [47644736, 47644831], [47674945, 47675001], [47675509, 47675603], [47682443, 47682527], [47683010, 47683115], [47684454, 47684537], [47684741, 47684832], [47694416, 47694478], [47694567, 47694730], [47695629, 47695711], [47697587, 47697645], [47699852, 47699943], [47703125, 47703328], [47722951, 47723086], [47727288, 47727418], [47730291, 47730399], [47732358, 47732499], [47733139, 47733277]]