PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000265944	[[26223195, 26223257], [26224672, 26224759], [26241022, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26409604, 26409731], [26414326, 26414537], [26417319, 26417467], [26432376, 26432530], [26434374, 26434463], [26436358, 26436488], [26442778, 26442858], [26443674, 26443752], [26446238, 26446444], [26454995, 26455107], [26457640, 26457803], [26459344, 26459468], [26462591, 26463486], [26465629, 26465774], [26482133, 26482240], [26490193, 26490234], [26491892, 26492036], [26500771, 26501456]]	[[26241039, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26409604, 26409731], [26414326, 26414537], [26417319, 26417467], [26432376, 26432530], [26434374, 26434463], [26436358, 26436488], [26442778, 26442858], [26443674, 26443752], [26446238, 26446444], [26454995, 26455107], [26457640, 26457803], [26459344, 26459468], [26462591, 26463486], [26465629, 26465774], [26482133, 26482240], [26490193, 26490234], [26491892, 26492036], [26500771, 26500892]]
ENST00000543632	[[26224716, 26224759], [26241022, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26500771, 26501138]]	[[26241039, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26500771, 26500990]]
ENST00000376302	[[26223202, 26223257], [26224672, 26224759], [26241022, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26312410]]	[[26241039, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310590]]
ENST00000376301	[[26241028, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305956]]	[[26241039, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305834]]
ENST00000477691	[[26454770, 26455107], [26457640, 26457767]]	None
ENST00000478093	[[26491952, 26492036], [26493013, 26493431]]	None
NM_017433	[[26223001, 26223257], [26224672, 26224759], [26241022, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26409604, 26409731], [26414326, 26414537], [26417319, 26417467], [26432376, 26432530], [26434374, 26434463], [26436358, 26436488], [26442778, 26442858], [26443674, 26443752], [26446238, 26446444], [26454995, 26455107], [26457640, 26457803], [26459344, 26459468], [26462591, 26463486], [26465629, 26465774], [26482133, 26482240], [26490193, 26490234], [26491892, 26492036], [26500771, 26501465]]	[[26241039, 26241207], [26243802, 26243937], [26285418, 26285523], [26286087, 26286187], [26305748, 26305825], [26310431, 26310577], [26312950, 26313016], [26315305, 26315461], [26355903, 26356003], [26357696, 26357813], [26359039, 26359144], [26359246, 26359330], [26377131, 26377334], [26385309, 26385408], [26385496, 26385611], [26409604, 26409731], [26414326, 26414537], [26417319, 26417467], [26432376, 26432530], [26434374, 26434463], [26436358, 26436488], [26442778, 26442858], [26443674, 26443752], [26446238, 26446444], [26454995, 26455107], [26457640, 26457803], [26459344, 26459468], [26462591, 26463486], [26465629, 26465774], [26482133, 26482240], [26490193, 26490234], [26491892, 26492036], [26500771, 26500892]]

Promoter

Chrom	Start	End	Description
chr10	26223126	26223136	CAGE_peak_6_at_MYO3A_5end
chr10	26223137	26223175	CAGE_peak_1_at_MYO3A_5end
chr10	26223200	26223212	CAGE_peak_4_at_MYO3A_5end
chr10	26223250	26223262	CAGE_peak_2_at_MYO3A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I026000	26000970	26001166	0.23	[{'connected_gene': 'MYO3A', 'score': 15.42}, {'connected_gene': 'GAD2', 'score': 2.5}, {'connected_gene': 'GC10P025995', 'score': 0.44}, {'connected_gene': 'GC10P026192', 'score': 0.08}]
chr10	GH10I025933	25933720	25935132	1.9	[{'connected_gene': 'MYO3A', 'score': 581.65}, {'connected_gene': 'LOC101929073', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 4.91}, {'connected_gene': 'GC10P025995', 'score': 0.21}]
chr10	GH10I025765	25765610	25767236	1.07	[{'connected_gene': 'MYO3A', 'score': 4.89}, {'connected_gene': 'RNA5SP306', 'score': 0.25}, {'connected_gene': 'HIRAP1', 'score': 0.19}]
chr10	GH10I025753	25753777	25754201	0.83	[{'connected_gene': 'MYO3A', 'score': 4.77}, {'connected_gene': 'RNA5SP306', 'score': 0.22}, {'connected_gene': 'HIRAP1', 'score': 0.21}]
chr10	GH10I026213	26213880	26214981	0.6	[{'connected_gene': 'GAD2', 'score': 554.17}, {'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'MYO3A', 'score': 1.96}, {'connected_gene': 'GC10P026192', 'score': 0.34}]
chr10	GH10I025901	25901434	25902957	0.59	[{'connected_gene': 'GC10M025807', 'score': 550.77}, {'connected_gene': 'MYO3A', 'score': 18.94}, {'connected_gene': 'LOC101929073', 'score': 12.68}, {'connected_gene': 'LOC105376460', 'score': 0.77}]