PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000531825	[[118350470, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353827, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359825], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368679]]	None
ENST00000526223	[[118350471, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353830, 118355834], [118357339, 118357459], [118357550, 118357678], [118359558, 118359825], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	None
ENST00000525820	[[118350471, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353830, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	None
ENST00000358834	[[118350473, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368628]]
ENST00000528052	[[118350480, 118350551], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368686]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368628]]
ENST00000534537	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354380], [118355729, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368683]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354380], [118355729, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368628]]
ENST00000482833	[[118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	[[118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118360583, 118360639]]
ENST00000534513	[[118357580, 118357678], [118359558, 118360028]]	None
ENST00000525157	[[118349896, 118350096], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353827, 118353862]]	None
ENST00000530626	[[118349933, 118350096], [118350641, 118350690], [118351282, 118351654]]	None
ENST00000484402	[[118349934, 118350096], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354709]]	None
ENST00000470678	[[118349936, 118350096], [118350641, 118350690], [118351282, 118351437], [118351927, 118352077]]	None
ENST00000531984	[[118349936, 118350096], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834]]
ENST00000482159	[[118350470, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352700]]	None
ENST00000529584	[[118350470, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354732]]	None
ENST00000442761	[[118350489, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353830, 118353854]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353830, 118353854]]
ENST00000497792	[[118350527, 118350551], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353827, 118354376], [118355725, 118355834]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118353827, 118353854]]
ENST00000530319	[[118350527, 118350551], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118355725, 118355834], [118357339, 118357457]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118355725, 118355834], [118357339, 118357457]]
ENST00000527980	[[118350553, 118350690], [118351282, 118351437], [118351927, 118352053], [118355809, 118355834], [118357339, 118357459], [118357558, 118357574]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118355809, 118355834], [118357339, 118357459], [118357558, 118357574]]
ENST00000480870	[[118350562, 118350690], [118351282, 118351437], [118351927, 118352053], [118353830, 118354011]]	None
ENST00000471549	[[118350591, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354306]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354306]]
ENST00000510125	[[118352197, 118352466], [118353256, 118353424]]	None
NM_006229	[[118350470, 118350507], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368628]]
NM_001303135	[[118350524, 118350551], [118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368687]]	[[118350641, 118350690], [118351282, 118351437], [118351927, 118352053], [118354241, 118354376], [118355725, 118355834], [118357339, 118357459], [118357558, 118357678], [118359558, 118359677], [118360583, 118360713], [118363541, 118363650], [118364897, 118365065], [118368564, 118368628]]

Promoter

Chrom	Start	End	Description
chr10	118349920	118349930	CAGE_peak_3_at_PNLIPRP1_5end
chr10	118350468	118350480	CAGE_peak_1_at_PNLIPRP1_5end
chr10	118350522	118350533	CAGE_peak_2_at_PNLIPRP1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I116984	116984325	116984469	0.69	[{'connected_gene': 'SHTN1', 'score': 4.35}, {'connected_gene': 'KCNK18', 'score': 2.51}, {'connected_gene': 'HSPA12A', 'score': 1.76}, {'connected_gene': 'PNLIP', 'score': 1.72}, {'connected_gene': 'PNLIPRP2', 'score': 1.64}, {'connected_gene': 'PNLIPRP1', 'score': 1.62}, {'connected_gene': 'VAX1', 'score': 1.37}, {'connected_gene': 'ENSG00000235742', 'score': 0.28}]
chr10	GH10I116627	116627198	116627988	0.52	[{'connected_gene': 'PNLIPRP2', 'score': 14.69}, {'connected_gene': 'PNLIPRP1', 'score': 11.06}, {'connected_gene': 'LOC105378499', 'score': 10.21}, {'connected_gene': 'C10orf82', 'score': 10.21}]
chr10	GH10I116616	116614875	116615224	0.2	[{'connected_gene': 'PNLIPRP2', 'score': 19.87}, {'connected_gene': 'PNLIPRP1', 'score': 0.34}]
chr10	GH10I116615	116615602	116616290	0.2	[{'connected_gene': 'PNLIPRP2', 'score': 6.72}, {'connected_gene': 'PNLIPRP1', 'score': 0.31}]
chr10	GH10I116612	116612469	116612520	0.4	[{'connected_gene': 'PNLIPRP2', 'score': 0.44}, {'connected_gene': 'PNLIPRP1', 'score': 0.34}]
chr10	GH10I116618	116618805	116621980	1.04	[{'connected_gene': 'PNLIPRP2', 'score': 572.76}, {'connected_gene': 'PNLIPRP1', 'score': 0.29}]
chr10	GH10I116594	116594490	116594983	0.2	[{'connected_gene': 'PNLIPRP2', 'score': 11.62}, {'connected_gene': 'PNLIP', 'score': 11.42}, {'connected_gene': 'RNU6-1090P', 'score': 11.04}, {'connected_gene': 'PNLIPRP1', 'score': 0.77}]
chr10	GH10I116608	116608660	116612018	1.23	[{'connected_gene': 'PNLIPRP2', 'score': 11.42}, {'connected_gene': 'LOC105378499', 'score': 7.5}, {'connected_gene': 'PNLIPRP1', 'score': 0.37}]
chr10	GH10I116589	116589370	116591668	1.32	[{'connected_gene': 'PNLIPRP1', 'score': 550.77}, {'connected_gene': 'PNLIPRP2', 'score': 11.44}, {'connected_gene': 'PNLIP', 'score': 10.86}, {'connected_gene': 'RNU6-1090P', 'score': 10.83}]
chr10	GH10I116597	116597961	116598303	0.43	[{'connected_gene': 'PNLIPRP1', 'score': 0.44}, {'connected_gene': 'PNLIPRP2', 'score': 0.34}]
chr10	GH10I116218	116218505	116219339	0.2	[{'connected_gene': 'PNLIPRP1', 'score': 4.63}, {'connected_gene': 'GFRA1', 'score': 0.23}, {'connected_gene': 'GC10M115985', 'score': 0.13}]
chr10	GH10I116614	116614098	116614461	0.39	[{'connected_gene': 'PNLIP', 'score': 147.08}, {'connected_gene': 'PNLIPRP2', 'score': 79.03}, {'connected_gene': 'PNLIPRP1', 'score': 72.0}]
chr10	GH10I116587	116587477	116588055	0.31	[{'connected_gene': 'PNLIP', 'score': 10.86}, {'connected_gene': 'RNU6-1090P', 'score': 10.84}, {'connected_gene': 'PNLIPRP1', 'score': 0.77}, {'connected_gene': 'PNLIPP1', 'score': 0.39}]
chr10	GH10I116613	116613438	116614056	0.38	[{'connected_gene': 'LOC105378499', 'score': 7.42}, {'connected_gene': 'PNLIPRP2', 'score': 0.44}, {'connected_gene': 'PNLIPRP1', 'score': 0.34}]