PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264065	[[183580998, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183659191]]	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183641859]]
ENST00000491074	[[183581022, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619429, 183619532], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183642191]]	None
ENST00000418559	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183617275, 183617350], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183642572]]	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183605025, 183605048]]
ENST00000469118	[[183581153, 183581210], [183581742, 183581799], [183582883, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385]]	None
ENST00000537515	[[183582793, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183604933]]	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183604283]]
ENST00000494462	[[183584806, 183584896], [183586751, 183586802], [183593302, 183593834]]	None
ENST00000459930	[[183594561, 183594668], [183595756, 183595834], [183597225, 183597464]]	None
ENST00000444005	[[183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183604436], [183605025, 183605111]]	[[183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183604283]]
NR_073367	[[183580767, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183617275, 183617350], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183644752]]	None
NM_001271581	[[183580767, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183644752]]	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183641859]]
NM_018981	[[183580767, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183644752]]	[[183582813, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183605025, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183641859]]
NR_073365	[[183580767, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183644752]]	None
NR_073366	[[183580767, 183581210], [183581742, 183581799], [183582667, 183583017], [183584733, 183584896], [183586751, 183586802], [183593302, 183593385], [183593589, 183593721], [183594574, 183594668], [183595756, 183595834], [183597225, 183597269], [183600975, 183601113], [183604271, 183605115], [183605969, 183606083], [183608324, 183608439], [183616384, 183616512], [183616798, 183616915], [183619429, 183619532], [183619729, 183619831], [183621040, 183621196], [183622418, 183622552], [183623563, 183623617], [183623886, 183624034], [183627408, 183627528], [183640042, 183640147], [183641847, 183644752]]	None

Promoter

Chrom	Start	End	Description
chr2	183580713	183580750	CAGE_peak_2_at_DNAJC10_5end
chr2	183580954	183581049	CAGE_peak_1_at_DNAJC10_5end
chr2	183581063	183581074	CAGE_peak_3_at_DNAJC10_5end
chr2	183582774	183582807	CAGE_peak_6_at_DNAJC10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I182714	182714696	182718639	2.07	[{'connected_gene': 'DNAJC10', 'score': 550.77}, {'connected_gene': 'NCKAP1', 'score': 13.08}, {'connected_gene': 'NUP35', 'score': 10.54}, {'connected_gene': 'PDE1A', 'score': 10.03}, {'connected_gene': 'FRZB', 'score': 7.0}, {'connected_gene': 'GC02P182762', 'score': 0.25}]
chr2	GH02I182668	182668854	182669003	0.82	[{'connected_gene': 'DNAJC10', 'score': 12.14}, {'connected_gene': 'PIR54634', 'score': 0.39}, {'connected_gene': 'LOC101929976', 'score': 0.25}]
chr2	GH02I181952	181952392	181955807	1.52	[{'connected_gene': 'PPP1R1C', 'score': 550.77}, {'connected_gene': 'DNAJC10', 'score': 9.7}, {'connected_gene': 'SSFA2', 'score': 0.21}]
chr2	GH02I183034	183034790	183039545	2.04	[{'connected_gene': 'NCKAP1', 'score': 555.34}, {'connected_gene': 'NUP35', 'score': 26.3}, {'connected_gene': 'DNAJC10', 'score': 10.58}, {'connected_gene': 'FRZB', 'score': 9.64}, {'connected_gene': 'GC02M183023', 'score': 0.39}, {'connected_gene': 'ENSG00000202141', 'score': 0.39}]