PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000461949	[[153308496, 153311230], [153312319, 153312551], [153313991, 153314109], [153315647, 153315777]]	None
ENST00000414771	[[153308496, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454]]	[[153311029, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454]]
ENST00000464135	[[153308496, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316429], [153319684, 153319764], [153323561, 153323820]]	None
ENST00000485512	[[153308496, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316429], [153319684, 153319764], [153323561, 153323820]]	None
ENST00000367231	[[153308496, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]	[[153311219, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]
ENST00000367233	[[153308496, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]	[[153311029, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]
ENST00000367230	[[153308496, 153311230], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323820]]	[[153311219, 153311230], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323820]]
ENST00000485283	[[153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316397, 153316454], [153319684, 153319877]]	None
ENST00000463251	[[153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316397, 153316454], [153319684, 153319764], [153323561, 153323820]]	None
ENST00000448966	[[153312362, 153312456], [153313991, 153314109], [153315647, 153315943]]	[[153312362, 153312456], [153313991, 153314109], [153315647, 153315926]]
ENST00000482526	[[153319427, 153319764], [153323561, 153323671]]	None
NM_019041	[[153308500, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323950]]	[[153311029, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]
NM_001114184	[[153308500, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323950]]	[[153311219, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316454], [153319684, 153319764], [153323561, 153323820]]
NM_001301870	[[153308500, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323950]]	[[153311029, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323820]]
NM_001301047	[[153308500, 153311230], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323950]]	[[153311219, 153311230], [153313991, 153314109], [153315647, 153315811], [153316378, 153316454], [153319684, 153319764], [153323561, 153323820]]
NM_001301871	[[153308500, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316429], [153319684, 153319764], [153323561, 153323950]]	[[153311029, 153311230], [153312319, 153312456], [153313991, 153314109], [153315647, 153315811], [153316270, 153316367]]
NR_126056	[[153308500, 153311230], [153313991, 153314109], [153315647, 153315811], [153316270, 153316429], [153319684, 153319764], [153323561, 153323950]]	None
NM_001301872	[[153319427, 153319764], [153323561, 153323950]]	[[153319660, 153319764], [153323561, 153323820]]

Promoter

Chrom	Start	End	Description
chr6	153323801	153323874	CAGE_peak_1_at_MTRF1L_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I153032	153032366	153032495	0.43	[{'connected_gene': 'MTRF1L', 'score': 12.63}, {'connected_gene': 'PIR48130', 'score': 0.44}, {'connected_gene': 'RGS17', 'score': 0.15}]
chr6	GH06I152975	152975001	152975800	0.77	[{'connected_gene': 'MTRF1L', 'score': 52.36}, {'connected_gene': 'FBXO5', 'score': 0.44}, {'connected_gene': 'ENSG00000227627', 'score': 0.44}, {'connected_gene': 'ENSG00000220745', 'score': 0.37}]
chr6	GH06I152978	152978601	152979000	0.38	[{'connected_gene': 'MTRF1L', 'score': 27.84}, {'connected_gene': 'FBXO5', 'score': 0.77}, {'connected_gene': 'ENSG00000227627', 'score': 0.77}, {'connected_gene': 'ENSG00000220745', 'score': 0.37}]
chr6	GH06I153001	153001207	153004185	2.04	[{'connected_gene': 'MTRF1L', 'score': 600.81}, {'connected_gene': 'GC06P153002', 'score': 550.77}, {'connected_gene': 'PIR33309', 'score': 0.37}, {'connected_gene': 'GC06P152985', 'score': 0.37}]
chr6	GH06I153101	153101541	153101800	0.29	[{'connected_gene': 'RGS17', 'score': 11.03}, {'connected_gene': 'MTRF1L', 'score': 1.99}, {'connected_gene': 'PIR48130', 'score': 0.18}]
chr6	GH06I153089	153089855	153093614	1.22	[{'connected_gene': 'RGS17', 'score': 17.95}, {'connected_gene': 'MTRF1L', 'score': 6.01}, {'connected_gene': 'PIR48130', 'score': 0.2}]
chr6	GH06I152980	152980263	152985920	2.09	[{'connected_gene': 'FBXO5', 'score': 608.13}, {'connected_gene': 'PIR33309', 'score': 550.77}, {'connected_gene': 'ENSG00000227627', 'score': 550.77}, {'connected_gene': 'GC06P152985', 'score': 550.77}, {'connected_gene': 'MTRF1L', 'score': 36.34}, {'connected_gene': 'RPL27AP6', 'score': 10.27}, {'connected_gene': 'ENSG00000220745', 'score': 0.34}]
chr6	GH06I153024	153024526	153024695	0.7	[{'connected_gene': 'PIR48130', 'score': 550.77}, {'connected_gene': 'VIP', 'score': 9.67}, {'connected_gene': 'MTRF1L', 'score': 0.34}, {'connected_gene': 'RGS17', 'score': 0.14}]