PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000431532	[[86115105, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173619], [86173736, 86174116]]	[[86119740, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173619], [86173736, 86173967]]
ENST00000370574	[[86118490, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86174101]]	[[86119740, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173967]]
NM_017953	[[86115105, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86174116]]	[[86119740, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173967]]
NM_001170670	[[86115105, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173619], [86173736, 86174116]]	[[86119740, 86119781], [86123529, 86123654], [86142918, 86142996], [86144383, 86144464], [86146518, 86146587], [86167839, 86167943], [86171760, 86171846], [86171931, 86172038], [86172124, 86172190], [86173311, 86173619], [86173736, 86173967]]

Promoter

Chrom	Start	End	Description
chr1	86173678	86173709	CAGE_peak_5_at_ZNHIT6_5end
chr1	86174004	86174028	CAGE_peak_2_at_ZNHIT6_5end
chr1	86174045	86174056	CAGE_peak_4_at_ZNHIT6_5end
chr1	86174065	86174134	CAGE_peak_1_at_ZNHIT6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I085047	85047382	85050515	1.97	[{'connected_gene': 'MCOLN3', 'score': 570.02}, {'connected_gene': 'ENSG00000271576', 'score': 16.2}, {'connected_gene': 'MCOLN2', 'score': 13.64}, {'connected_gene': 'ZNHIT6', 'score': 11.95}, {'connected_gene': 'WDR63', 'score': 4.38}, {'connected_gene': 'MIR4423', 'score': 0.18}]
chr1	GH01I085706	85706796	85709617	2.07	[{'connected_gene': 'ZNHIT6', 'score': 572.52}, {'connected_gene': 'ODF2L', 'score': 12.28}, {'connected_gene': 'DDAH1', 'score': 10.04}, {'connected_gene': 'CYR61', 'score': 10.04}, {'connected_gene': 'PIR53460', 'score': 0.23}]
chr1	GH01I085520	85520315	85527887	1.66	[{'connected_gene': 'ZNHIT6', 'score': 28.84}, {'connected_gene': 'CYR61', 'score': 13.18}, {'connected_gene': 'DDAH1', 'score': 12.12}, {'connected_gene': 'C1orf52', 'score': 10.87}, {'connected_gene': 'ENSG00000282057', 'score': 0.23}, {'connected_gene': 'ENSG00000273264', 'score': 0.22}]
chr1	GH01I085616	85616932	85618576	0.4	[{'connected_gene': 'ZNHIT6', 'score': 15.27}, {'connected_gene': 'ENSG00000199934', 'score': 12.27}, {'connected_gene': 'DDAH1', 'score': 11.78}, {'connected_gene': 'CYR61', 'score': 11.78}, {'connected_gene': 'GC01P085628', 'score': 0.39}, {'connected_gene': 'ENSG00000230285', 'score': 0.37}]
chr1	GH01I085631	85631066	85632993	0.2	[{'connected_gene': 'ZNHIT6', 'score': 16.85}, {'connected_gene': 'DDAH1', 'score': 10.93}, {'connected_gene': 'CYR61', 'score': 10.93}, {'connected_gene': 'GC01P085628', 'score': 0.77}, {'connected_gene': 'PIR53460', 'score': 0.34}]
chr1	GH01I085680	85680908	85681907	0.79	[{'connected_gene': 'ZNHIT6', 'score': 17.34}, {'connected_gene': 'DDAH1', 'score': 10.56}, {'connected_gene': 'CYR61', 'score': 10.56}, {'connected_gene': 'PIR53460', 'score': 0.31}]
chr1	GH01I085849	85849293	85850933	0.65	[{'connected_gene': 'ZNHIT6', 'score': 4.93}, {'connected_gene': 'GC01P085823', 'score': 0.31}, {'connected_gene': 'GC01M085884', 'score': 0.29}, {'connected_gene': 'RNA5SP51', 'score': 0.29}, {'connected_gene': 'COL24A1', 'score': 0.06}]
chr1	GH01I085671	85671650	85673211	0.2	[{'connected_gene': 'ZNHIT6', 'score': 12.05}, {'connected_gene': 'PIR53460', 'score': 0.37}]
chr1	GH01I085604	85604570	85614535	1.65	[{'connected_gene': 'CYR61', 'score': 17.74}, {'connected_gene': 'ZNHIT6', 'score': 16.16}, {'connected_gene': 'DDAH1', 'score': 14.68}, {'connected_gene': 'ODF2L', 'score': 11.33}, {'connected_gene': 'ENSG00000230285', 'score': 0.39}, {'connected_gene': 'GC01P085628', 'score': 0.37}]
chr1	GH01I086154	86154602	86157541	1.88	[{'connected_gene': 'COL24A1', 'score': 558.27}, {'connected_gene': 'ODF2L', 'score': 20.39}, {'connected_gene': 'ZNHIT6', 'score': 11.96}, {'connected_gene': 'BCL10', 'score': 11.78}, {'connected_gene': 'C1orf52', 'score': 10.83}, {'connected_gene': 'GC01M086135', 'score': 0.44}]
chr1	GH01I085575	85575118	85586483	2.55	[{'connected_gene': 'DDAH1', 'score': 550.77}, {'connected_gene': 'CYR61', 'score': 550.77}, {'connected_gene': 'ODF2L', 'score': 27.9}, {'connected_gene': 'ZNHIT6', 'score': 24.68}, {'connected_gene': 'C1orf52', 'score': 11.52}, {'connected_gene': 'BCL10', 'score': 9.8}, {'connected_gene': 'ENSG00000282057', 'score': 0.77}, {'connected_gene': 'ENSG00000272691', 'score': 0.77}, {'connected_gene': 'GC01P085583', 'score': 0.77}]
chr1	GH01I085550	85550280	85552069	0.83	[{'connected_gene': 'DDAH1', 'score': 11.23}, {'connected_gene': 'CYR61', 'score': 11.23}, {'connected_gene': 'ZNHIT6', 'score': 4.34}, {'connected_gene': 'ENSG00000282057', 'score': 0.31}, {'connected_gene': 'ENSG00000273264', 'score': 0.18}]
chr1	GH01I085544	85544118	85545999	1.04	[{'connected_gene': 'DDAH1', 'score': 11.16}, {'connected_gene': 'CYR61', 'score': 11.14}, {'connected_gene': 'ZNHIT6', 'score': 5.33}, {'connected_gene': 'ENSG00000282057', 'score': 0.29}, {'connected_gene': 'ENSG00000273264', 'score': 0.18}]
chr1	GH01I085493	85493943	85498336	1.09	[{'connected_gene': 'DDAH1', 'score': 10.68}, {'connected_gene': 'CYR61', 'score': 10.68}, {'connected_gene': 'ZNHIT6', 'score': 4.3}, {'connected_gene': 'ENSG00000273264', 'score': 0.31}, {'connected_gene': 'ENSG00000282057', 'score': 0.18}]
chr1	GH01I085568	85568095	85574456	1.12	[{'connected_gene': 'ENSG00000199934', 'score': 12.13}, {'connected_gene': 'ZNHIT6', 'score': 5.46}, {'connected_gene': 'ENSG00000282057', 'score': 0.44}, {'connected_gene': 'DDAH1', 'score': 0.44}, {'connected_gene': 'ENSG00000273264', 'score': 0.15}]
chr1	GH01I085654	85654638	85654667	0.38	[{'connected_gene': 'PIR53460', 'score': 550.77}, {'connected_gene': 'CYR61', 'score': 10.53}, {'connected_gene': 'DDAH1', 'score': 10.52}, {'connected_gene': 'ENSG00000199934', 'score': 10.49}, {'connected_gene': 'ZNHIT6', 'score': 0.23}]
chr1	GH01I085627	85627382	85630908	1.28	[{'connected_gene': 'GC01P085628', 'score': 550.77}, {'connected_gene': 'ENSG00000199934', 'score': 11.91}, {'connected_gene': 'CYR61', 'score': 11.43}, {'connected_gene': 'DDAH1', 'score': 11.42}, {'connected_gene': 'ZNHIT6', 'score': 8.87}, {'connected_gene': 'PIR53460', 'score': 0.34}]
chr1	GH01I085622	85622113	85623866	0.88	[{'connected_gene': 'ENSG00000199934', 'score': 11.29}, {'connected_gene': 'DDAH1', 'score': 10.93}, {'connected_gene': 'CYR61', 'score': 10.93}, {'connected_gene': 'ZNHIT6', 'score': 8.7}, {'connected_gene': 'GC01P085628', 'score': 0.44}, {'connected_gene': 'ENSG00000230285', 'score': 0.34}]
chr1	GH01I085553	85553055	85554217	0.6	[{'connected_gene': 'ENSG00000199934', 'score': 11.79}, {'connected_gene': 'DDAH1', 'score': 11.3}, {'connected_gene': 'CYR61', 'score': 11.27}, {'connected_gene': 'ZNHIT6', 'score': 4.67}, {'connected_gene': 'ENSG00000282057', 'score': 0.34}, {'connected_gene': 'ENSG00000273264', 'score': 0.17}]