PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000320578	[[107799228, 107799521], [107832671, 107834208]]	[[107799294, 107799521], [107832671, 107833098]]
NM_017516	[[107799200, 107799521], [107832671, 107834208]]	[[107799294, 107799521], [107832671, 107833098]]

Promoter

Chrom	Start	End	Description
chr11	107799118	107799197	CAGE_peak_1_at_RAB39A_5end
chr11	107799268	107799291	CAGE_peak_4_at_RAB39A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I107988	107988410	107988782	0.57	[{'connected_gene': 'CUL5', 'score': 12.13}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I107989	107988947	107989005	0.27	[{'connected_gene': 'CUL5', 'score': 0.37}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I107975	107975432	107975450	0.24	[{'connected_gene': 'CUL5', 'score': 0.29}, {'connected_gene': 'RAB39A', 'score': 0.25}]
chr11	GH11I107991	107991797	107992313	0.2	[{'connected_gene': 'ACAT1', 'score': 11.47}, {'connected_gene': 'CUL5', 'score': 0.37}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I107948	107948097	107948905	0.31	[{'connected_gene': 'ACAT1', 'score': 4.24}, {'connected_gene': 'RAB39A', 'score': 0.34}, {'connected_gene': 'CUL5', 'score': 0.21}]
chr11	GH11I107999	107999915	108000064	0.62	[{'connected_gene': 'ACAT1', 'score': 10.66}, {'connected_gene': 'ENSG00000255467', 'score': 10.66}, {'connected_gene': 'DDX10', 'score': 10.5}, {'connected_gene': 'CUL5', 'score': 0.44}, {'connected_gene': 'RAB39A', 'score': 0.19}]
chr11	GH11I107957	107957032	107957800	0.9	[{'connected_gene': 'SLN', 'score': 4.36}, {'connected_gene': 'ELMOD1', 'score': 4.15}, {'connected_gene': 'RAB39A', 'score': 0.31}, {'connected_gene': 'CUL5', 'score': 0.23}]
chr11	GH11I107929	107929875	107930036	0.46	[{'connected_gene': 'RAB39A', 'score': 550.77}, {'connected_gene': 'SLC35F2', 'score': 550.77}, {'connected_gene': 'CUL5', 'score': 0.18}]
chr11	GH11I107882	107882175	107882324	0.46	[{'connected_gene': 'RAB39A', 'score': 11.29}, {'connected_gene': 'SLC35F2', 'score': 11.29}, {'connected_gene': 'SLN', 'score': 10.12}, {'connected_gene': 'RPLP2P3', 'score': 0.31}, {'connected_gene': 'LOC203930', 'score': 0.11}]
chr11	GH11I107927	107927601	107929601	1.96	[{'connected_gene': 'SLC35F2', 'score': 556.71}, {'connected_gene': 'RAB39A', 'score': 550.77}, {'connected_gene': 'NPAT', 'score': 34.06}, {'connected_gene': 'CWF19L2', 'score': 19.15}, {'connected_gene': 'CUL5', 'score': 10.34}, {'connected_gene': 'ALKBH8', 'score': 10.02}, {'connected_gene': 'DDX10', 'score': 9.91}, {'connected_gene': 'ASS1P13', 'score': 5.39}]