PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000184183	[[123687367, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699451], [123700225, 123700271], [123710027, 123710199]]	[[123688001, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699328]]
ENST00000405845	[[123687861, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699340], [123710768, 123710984]]	[[123688001, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699328]]
ENST00000487124	[[123693392, 123694387], [123695710, 123695828], [123699212, 123699340], [123710768, 123710930]]	None
ENST00000467907	[[123694232, 123694387], [123695710, 123695828], [123699212, 123699451], [123700225, 123700271], [123710768, 123710893]]	[[123694232, 123694387], [123695710, 123695828], [123699212, 123699328]]
ENST00000460743	[[123694272, 123694387], [123695710, 123695828], [123699212, 123699340], [123700225, 123700271], [123710027, 123710140], [123710768, 123710975]]	[[123694272, 123694387], [123695710, 123695828], [123699212, 123699328]]
ENST00000496145	[[123695711, 123695828], [123699212, 123699340], [123700225, 123700271], [123710768, 123711025]]	[[123695711, 123695828], [123699212, 123699328]]
ENST00000459660	[[123697521, 123699340], [123700225, 123700271], [123710890, 123710934]]	[[123699151, 123699328]]
ENST00000479867	[[123697521, 123699340], [123710768, 123711005]]	[[123699151, 123699328]]
ENST00000495093	[[123698263, 123699451], [123710768, 123710956]]	[[123699151, 123699328]]
ENST00000484329	[[123699151, 123699451], [123700225, 123700271], [123710768, 123710988]]	[[123699151, 123699328]]
NM_017578	[[123687861, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699451], [123700225, 123700271], [123710027, 123710199]]	[[123688001, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699328]]
NM_001317774	[[123687861, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699340], [123710768, 123711017]]	[[123688001, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123699212, 123699328]]
NM_001317775	[[123687861, 123688068], [123688888, 123689064], [123694225, 123694387], [123695710, 123695828], [123710768, 123711017]]	[[123688001, 123688068], [123688888, 123689064], [123694225, 123694345]]
NR_133918	[[123697521, 123699451], [123700225, 123700271], [123710768, 123711017]]	None
NR_133919	[[123697521, 123699451], [123710768, 123711017]]	None
NR_133916	[[123697521, 123699340], [123710768, 123711017]]	None
NR_133917	[[123697521, 123699340], [123700225, 123700271], [123710890, 123711017]]	None

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I124032	124032104	124035000	1.09	[{'connected_gene': 'KALRN', 'score': 561.76}, {'connected_gene': 'SEC22A', 'score': 13.97}, {'connected_gene': 'ROPN1', 'score': 10.89}, {'connected_gene': 'UMPS', 'score': 10.32}, {'connected_gene': 'MIR5002', 'score': 0.15}]
chr3	GH03I123960	123960081	123962000	1.97	[{'connected_gene': 'CCDC14', 'score': 558.25}, {'connected_gene': 'ROPN1', 'score': 16.72}, {'connected_gene': 'MYLK', 'score': 0.18}]
chr3	GH03I123979	123979734	123980400	0.6	[{'connected_gene': 'CCDC14', 'score': 8.13}, {'connected_gene': 'ROPN1', 'score': 0.39}]
chr3	GH03I124232	124232815	124233918	0.2	[{'connected_gene': 'ROPN1', 'score': 9.59}, {'connected_gene': 'KALRN', 'score': 6.57}, {'connected_gene': 'PIR58041', 'score': 0.23}, {'connected_gene': 'MIR6083', 'score': 0.11}]
chr3	GH03I124075	124075697	124076780	0.2	[{'connected_gene': 'ROPN1', 'score': 9.65}, {'connected_gene': 'KALRN', 'score': 7.94}, {'connected_gene': 'MIR5002', 'score': 0.22}]
chr3	GH03I124078	124078770	124079320	0.43	[{'connected_gene': 'ROPN1', 'score': 9.62}, {'connected_gene': 'KALRN', 'score': 0.25}, {'connected_gene': 'MIR5002', 'score': 0.23}]
chr3	GH03I123949	123949549	123950383	0.31	[{'connected_gene': 'ROPN1', 'score': 9.95}, {'connected_gene': 'CCDC14', 'score': 0.39}, {'connected_gene': 'MYLK', 'score': 0.2}]
chr3	GH03I123990	123990130	123990189	0.5	[{'connected_gene': 'ROPN1', 'score': 550.77}, {'connected_gene': 'CCDC14', 'score': 0.31}]
chr3	GH03I123640	123640734	123640963	0.58	[{'connected_gene': 'ROPN1', 'score': 9.19}, {'connected_gene': 'HACD2', 'score': 5.3}, {'connected_gene': 'PIR59914', 'score': 0.44}, {'connected_gene': 'MYLK-AS2', 'score': 0.25}, {'connected_gene': 'MYLK-AS1', 'score': 0.22}, {'connected_gene': 'MYLK', 'score': 0.07}]
chr3	GH03I123732	123732034	123736524	1.15	[{'connected_gene': 'ROPN1', 'score': 9.57}, {'connected_gene': 'LOC105369194', 'score': 0.26}, {'connected_gene': 'GC03P123815', 'score': 0.18}, {'connected_gene': 'MYLK', 'score': 0.1}]
chr3	GH03I123691	123691534	123702401	1.12	[{'connected_gene': 'ROPN1', 'score': 4.61}, {'connected_gene': 'LOC105369194', 'score': 0.77}, {'connected_gene': 'MYLK-AS2', 'score': 0.44}, {'connected_gene': 'GC03P123815', 'score': 0.13}, {'connected_gene': 'MYLK', 'score': 0.09}]
chr3	GH03I124273	124273801	124274000	0.4	[{'connected_gene': 'ROPN1', 'score': 9.66}, {'connected_gene': 'PIR58041', 'score': 0.16}, {'connected_gene': 'MIR6083', 'score': 0.15}, {'connected_gene': 'KALRN', 'score': 0.07}]
chr3	GH03I124281	124281077	124286062	0.64	[{'connected_gene': 'ROPN1', 'score': 9.82}, {'connected_gene': 'MIR6083', 'score': 0.16}, {'connected_gene': 'PIR58041', 'score': 0.15}, {'connected_gene': 'KALRN', 'score': 0.07}]
chr3	GH03I124274	124274910	124279010	0.86	[{'connected_gene': 'ROPN1', 'score': 9.66}, {'connected_gene': 'PIR58041', 'score': 0.16}, {'connected_gene': 'MIR6083', 'score': 0.15}, {'connected_gene': 'KALRN', 'score': 0.07}]
chr3	GH03I124272	124272250	124273469	0.78	[{'connected_gene': 'ROPN1', 'score': 9.66}, {'connected_gene': 'PIR58041', 'score': 0.17}, {'connected_gene': 'MIR6083', 'score': 0.15}, {'connected_gene': 'KALRN', 'score': 0.07}]
chr3	GH03I124234	124234307	124236125	0.43	[{'connected_gene': 'ROPN1', 'score': 9.59}, {'connected_gene': 'PIR58041', 'score': 0.23}, {'connected_gene': 'MIR6083', 'score': 0.12}, {'connected_gene': 'KALRN', 'score': 0.08}]
chr3	GH03I123992	123992000	123992401	0.5	[{'connected_gene': 'ROPN1', 'score': 550.77}, {'connected_gene': 'GC03P124016', 'score': 0.34}]
chr3	GH03I123652	123652396	123654662	1.54	[{'connected_gene': 'MYLK', 'score': 13.38}, {'connected_gene': 'MYLK-AS2', 'score': 12.23}, {'connected_gene': 'HACD2', 'score': 10.77}, {'connected_gene': 'MYLK-AS1', 'score': 10.77}, {'connected_gene': 'ROPN1', 'score': 8.82}, {'connected_gene': 'PIR59914', 'score': 0.34}]
chr3	GH03I123641	123641112	123642917	1.33	[{'connected_gene': 'HACD2', 'score': 9.4}, {'connected_gene': 'ROPN1', 'score': 9.19}, {'connected_gene': 'PIR59914', 'score': 0.39}, {'connected_gene': 'MYLK-AS2', 'score': 0.25}, {'connected_gene': 'MYLK-AS1', 'score': 0.22}, {'connected_gene': 'MYLK', 'score': 0.07}]
chr3	GH03I123636	123636069	123638138	0.92	[{'connected_gene': 'HACD2', 'score': 17.7}, {'connected_gene': 'MYLK-AS2', 'score': 11.14}, {'connected_gene': 'MYLK', 'score': 10.97}, {'connected_gene': 'MYLK-AS1', 'score': 10.95}, {'connected_gene': 'ROPN1', 'score': 9.19}, {'connected_gene': 'PIR59914', 'score': 0.44}]
chr3	GH03I124384	124384801	124385000	0.4	[{'connected_gene': 'RNU6-143P', 'score': 12.31}, {'connected_gene': 'ROPN1', 'score': 9.16}, {'connected_gene': 'MIR6083', 'score': 0.39}, {'connected_gene': 'KALRN', 'score': 0.05}]
chr3	GH03I123655	123655349	123656680	0.38	[{'connected_gene': 'MYLK-AS2', 'score': 12.64}, {'connected_gene': 'MYLK', 'score': 12.43}, {'connected_gene': 'ROPN1', 'score': 9.68}, {'connected_gene': 'PIR59914', 'score': 0.31}]