PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000556810	[[56955071, 56955310], [56958050, 56958299], [57051718, 57051750], [57052478, 57052620]]	[[56958250, 56958299], [57051718, 57051750], [57052478, 57052620]]
ENST00000556422	[[57046337, 57046391], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57116233]]	[[57070656, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092103]]
ENST00000261556	[[57046510, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57088248, 57088420], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57116233]]	[[57046632, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57088248, 57088420], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114215]]
ENST00000557657	[[57046542, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57080628]]	None
ENST00000556975	[[57046543, 57046792], [57051718, 57051750], [57052478, 57052630], [57059832, 57059942]]	None
ENST00000555497	[[57046543, 57046792], [57051718, 57051750], [57052478, 57052630], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114570]]	[[57046632, 57046792], [57051718, 57051750], [57052478, 57052630], [57072287, 57072291]]
ENST00000536419	[[57046543, 57046792], [57051718, 57051750], [57052478, 57052630], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114570]]	[[57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114215]]
ENST00000557626	[[57046548, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082982]]	None
ENST00000539559	[[57046558, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57085311, 57085481], [57088248, 57088420], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114812]]	[[57046632, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57085311, 57085345]]
ENST00000538838	[[57046601, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889], [57101616, 57101671]]	[[57046632, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092103]]
ENST00000556079	[[57052410, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57075907]]	None
ENST00000554981	[[57052411, 57052630], [57059832, 57060035], [57070532, 57070659]]	None
ENST00000556929	[[57052572, 57052630], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57085311, 57085381]]	[[57052572, 57052630], [57072287, 57072291]]
ENST00000555905	[[57075858, 57076003], [57078962, 57079003], [57082661, 57082745], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889]]	[[57075858, 57076003], [57078962, 57079003], [57082661, 57082745], [57085311, 57085345]]
ENST00000553335	[[57075962, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57086075, 57086184]]	None
ENST00000556648	[[57082168, 57082745], [57083900, 57084015], [57085311, 57085481], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114640]]	None
ENST00000555046	[[57103233, 57103316], [57116789, 57117324]]	[[57103233, 57103316], [57116789, 57116831]]
NM_017799	[[57046510, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57088248, 57088420], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57116233]]	[[57046632, 57046792], [57051718, 57051750], [57052478, 57052630], [57070532, 57070710], [57072287, 57072401], [57075823, 57076003], [57078962, 57079003], [57082661, 57082745], [57083900, 57084015], [57085311, 57085481], [57088248, 57088420], [57092099, 57092248], [57099712, 57099889], [57101616, 57101670], [57103225, 57103316], [57113960, 57114215]]

Promoter

Chrom	Start	End	Description
chr14	57046500	57046529	CAGE_peak_1_at_C14orf101_5end
chr14	57046530	57046550	CAGE_peak_2_at_C14orf101_5end
chr14	57052405	57052416	CAGE_peak_4_at_C14orf101_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I056952	56952290	56954727	1.18	[{'connected_gene': 'TMEM260', 'score': 12.35}, {'connected_gene': 'LOC105370515', 'score': 9.68}, {'connected_gene': 'RPL3P3', 'score': 0.34}, {'connected_gene': 'GC14P056899', 'score': 0.23}, {'connected_gene': 'OTX2-AS1', 'score': 0.11}]
chr14	GH14I056578	56578943	56581340	2.25	[{'connected_gene': 'TMEM260', 'score': 558.14}, {'connected_gene': 'LOC105370515', 'score': 17.84}, {'connected_gene': 'PELI2', 'score': 13.23}, {'connected_gene': 'LOC101927690', 'score': 0.2}]
chr14	GH14I056659	56659406	56659789	0.43	[{'connected_gene': 'TMEM260', 'score': 6.82}, {'connected_gene': 'LOC105370515', 'score': 0.39}, {'connected_gene': 'GC14M056684', 'score': 0.34}, {'connected_gene': 'ENSG00000259133', 'score': 0.19}]
chr14	GH14I056487	56487383	56487432	0.43	[{'connected_gene': 'TMEM260', 'score': 550.77}, {'connected_gene': 'LOC105370514', 'score': 0.15}]
chr14	GH14I056489	56487843	56488112	0.43	[{'connected_gene': 'TMEM260', 'score': 550.77}, {'connected_gene': 'LOC105370514', 'score': 0.15}]
chr14	GH14I056488	56487543	56487692	0.38	[{'connected_gene': 'TMEM260', 'score': 550.77}, {'connected_gene': 'LOC105370514', 'score': 0.15}]
chr14	GH14I056571	56571728	56572005	0.24	[{'connected_gene': 'TMEM260', 'score': 8.25}, {'connected_gene': 'LOC101927690', 'score': 0.22}, {'connected_gene': 'LOC105370515', 'score': 0.18}]
chr14	GH14I056491	56491400	56491601	0.86	[{'connected_gene': 'TMEM260', 'score': 0.77}, {'connected_gene': 'LOC101927690', 'score': 0.34}]
chr14	GH14I056648	56648103	56648781	0.38	[{'connected_gene': 'LOC105370515', 'score': 550.77}, {'connected_gene': 'LOC101927690', 'score': 0.12}, {'connected_gene': 'TMEM260', 'score': 0.1}]
chr14	GH14I056584	56584834	56585255	0.51	[{'connected_gene': 'LOC105370515', 'score': 0.21}, {'connected_gene': 'LOC101927690', 'score': 0.19}, {'connected_gene': 'TMEM260', 'score': 0.15}]
chr14	GH14I056590	56590254	56590886	0.95	[{'connected_gene': 'LOC105370515', 'score': 0.22}, {'connected_gene': 'LOC101927690', 'score': 0.18}, {'connected_gene': 'TMEM260', 'score': 0.15}]
chr14	GH14I056608	56608843	56608932	0.7	[{'connected_gene': 'LOC105370515', 'score': 0.28}, {'connected_gene': 'LOC101927690', 'score': 0.16}, {'connected_gene': 'TMEM260', 'score': 0.13}]
chr14	GH14I056412	56412601	56413012	0.58	[{'connected_gene': 'LOC105370514', 'score': 0.34}, {'connected_gene': 'TMEM260', 'score': 0.18}]
chr14	GH14I056422	56422263	56423189	0.82	[{'connected_gene': 'LOC105370514', 'score': 0.29}, {'connected_gene': 'TMEM260', 'score': 0.2}]
chr14	GH14I056423	56423593	56423936	0.57	[{'connected_gene': 'LOC105370514', 'score': 0.29}, {'connected_gene': 'TMEM260', 'score': 0.21}]
chr14	GH14I056556	56556063	56556192	0.82	[{'connected_gene': 'LOC101927690', 'score': 0.26}, {'connected_gene': 'TMEM260', 'score': 0.2}, {'connected_gene': 'LOC105370515', 'score': 0.16}]
chr14	GH14I056542	56542875	56543218	0.22	[{'connected_gene': 'LOC101927690', 'score': 0.31}, {'connected_gene': 'TMEM260', 'score': 0.23}, {'connected_gene': 'LOC105370515', 'score': 0.14}]
chr14	GH14I056525	56525063	56525212	0.2	[{'connected_gene': 'LOC101927690', 'score': 0.39}, {'connected_gene': 'TMEM260', 'score': 0.28}, {'connected_gene': 'LOC105370515', 'score': 0.13}]
chr14	GH14I056513	56513837	56514311	0.4	[{'connected_gene': 'LOC101927690', 'score': 550.77}, {'connected_gene': 'TMEM260', 'score': 0.31}]
chr14	GH14I056760	56760307	56760668	0.67	[{'connected_gene': 'ENSG00000258703', 'score': 550.77}, {'connected_gene': 'TMEM260', 'score': 12.11}, {'connected_gene': 'LOC105370515', 'score': 9.76}, {'connected_gene': 'OTX2', 'score': 5.91}, {'connected_gene': 'GC14M056800', 'score': 0.26}]