PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000381571	[[47452884, 47453682], [47455075, 47455231], [47458593, 47458746], [47462160, 47462316], [47465602, 47465736]]	[[47453661, 47453682], [47455075, 47455231], [47458593, 47458746], [47462160, 47462316], [47465602, 47465668]]
ENST00000509220	[[47461863, 47462316], [47465602, 47465682]]	None
NM_017845	[[47452803, 47453682], [47455075, 47455231], [47458593, 47458746], [47462160, 47462316], [47465602, 47465747]]	[[47453661, 47453682], [47455075, 47455231], [47458593, 47458746], [47462160, 47462316], [47465602, 47465668]]
NM_001329668	[[47452803, 47453682], [47455075, 47455231], [47458599, 47458746], [47462160, 47462316], [47465602, 47465747]]	[[47453661, 47453682], [47455075, 47455231], [47458599, 47458746], [47462160, 47462316], [47465602, 47465668]]

Promoter

Chrom	Start	End	Description
chr4	47465666	47465726	CAGE_peak_1_at_COMMD8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I047498	47498275	47501036	0.96	[{'connected_gene': 'COMMD8', 'score': 11.79}, {'connected_gene': 'ATP10D', 'score': 4.98}, {'connected_gene': 'RPL21P52', 'score': 0.44}, {'connected_gene': 'GC04P047550', 'score': 0.23}]
chr4	GH04I047471	47471128	47472774	0.55	[{'connected_gene': 'COMMD8', 'score': 8.33}, {'connected_gene': 'LOC107986277', 'score': 0.44}, {'connected_gene': 'ATP10D', 'score': 0.39}]
chr4	GH04I047468	47468438	47469666	0.31	[{'connected_gene': 'COMMD8', 'score': 5.81}, {'connected_gene': 'LOC107986277', 'score': 0.44}, {'connected_gene': 'ATP10D', 'score': 0.37}]
chr4	GH04I047465	47465046	47465320	0.63	[{'connected_gene': 'COMMD8', 'score': 556.15}, {'connected_gene': 'LOC107986277', 'score': 550.77}, {'connected_gene': 'CNGA1', 'score': 5.76}, {'connected_gene': 'ATP10D', 'score': 0.34}]
chr4	GH04I047462	47462418	47464942	2	[{'connected_gene': 'COMMD8', 'score': 558.6}, {'connected_gene': 'LOC107986277', 'score': 550.77}, {'connected_gene': 'CNGA1', 'score': 5.76}, {'connected_gene': 'ATP10D', 'score': 5.6}, {'connected_gene': 'GC04M047447', 'score': 0.44}]
chr4	GH04I047493	47493526	47493868	0.81	[{'connected_gene': 'COMMD8', 'score': 13.78}, {'connected_gene': 'RPL21P52', 'score': 0.77}, {'connected_gene': 'ATP10D', 'score': 0.44}, {'connected_gene': 'GC04P047550', 'score': 0.22}]
chr4	GH04I048359	48359661	48361843	0.69	[{'connected_gene': 'SLC10A4', 'score': 8.84}, {'connected_gene': 'SLAIN2', 'score': 7.78}, {'connected_gene': 'COMMD8', 'score': 4.6}, {'connected_gene': 'GC04M048339', 'score': 0.37}]