PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000557842	[[89054789, 89054817], [89055581, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074843, 89074946], [89089770, 89089876]]	[[89074593, 89074704], [89074843, 89074936]]
ENST00000444300	[[89055713, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079565]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079565]]
ENST00000564406	[[89055713, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079612], [89089770, 89089884]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079565]]
ENST00000557837	[[89055713, 89056371], [89060012, 89060204], [89073853, 89074704], [89074843, 89074946], [89089770, 89089891]]	[[89074593, 89074704], [89074843, 89074936]]
ENST00000268148	[[89055713, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89089770, 89089906]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074936]]
ENST00000558413	[[89074003, 89074207], [89074527, 89074704], [89074839, 89074946], [89089770, 89089865]]	[[89074196, 89074207], [89074527, 89074704], [89074839, 89074936]]
ENST00000559656	[[89075098, 89075159], [89089468, 89089568]]	None
NR_135742	[[89045154, 89046040], [89054662, 89054817], [89055581, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89089770, 89089934]]	None
NR_135739	[[89054782, 89054817], [89055581, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074843, 89074946], [89089770, 89089934]]	None
NR_135743	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074843, 89074946], [89079542, 89079612], [89087841, 89087925], [89089494, 89089606]]	None
NM_001321596	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89087841, 89087925], [89089494, 89089606]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074936]]
NR_135744	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074843, 89074946], [89087841, 89087925], [89089494, 89089606]]	None
NM_017996	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079612], [89089770, 89089934]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89079542, 89079565]]
NM_001321594	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074839, 89074946], [89079542, 89079612], [89089770, 89089934]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074704], [89074839, 89074946], [89079542, 89079565]]
NR_135741	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89074843, 89074946], [89079542, 89079612], [89089770, 89089934]]	None
NM_001144074	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074946], [89089770, 89089934]]	[[89056181, 89056371], [89060012, 89060204], [89070829, 89071017], [89073853, 89074936]]
NR_026645	[[89055710, 89056371], [89060012, 89060204], [89073853, 89074704], [89074843, 89074946], [89089770, 89089934]]	None
NR_135740	[[89055710, 89056371], [89060012, 89060204], [89070829, 89071017], [89074843, 89074946], [89089770, 89089934]]	None

Promoter

Chrom	Start	End	Description
chr15	89089860	89089918	CAGE_peak_1_at_DET1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I088545	88545600	88547376	2.03	[{'connected_gene': 'DET1', 'score': 559.1}, {'connected_gene': 'POLG', 'score': 25.05}, {'connected_gene': 'FANCI', 'score': 12.52}, {'connected_gene': 'ENSG00000173867', 'score': 4.83}, {'connected_gene': 'PIR61736', 'score': 0.77}]
chr15	GH15I087751	87751736	87753412	0.92	[{'connected_gene': 'DET1', 'score': 11.0}, {'connected_gene': 'GC15P087758', 'score': 0.44}, {'connected_gene': 'LOC102724465', 'score': 0.25}]
chr15	GH15I088537	88537256	88538144	0.65	[{'connected_gene': 'DET1', 'score': 8.69}, {'connected_gene': 'LINC01586', 'score': 6.48}, {'connected_gene': 'PIR61736', 'score': 0.44}, {'connected_gene': 'ENSG00000173867', 'score': 0.31}]
chr15	GH15I088536	88535155	88535214	0.73	[{'connected_gene': 'DET1', 'score': 550.39}, {'connected_gene': 'PIR61736', 'score': 0.44}, {'connected_gene': 'ENSG00000173867', 'score': 0.34}]
chr15	GH15I088538	88538201	88540621	0.86	[{'connected_gene': 'DET1', 'score': 10.52}, {'connected_gene': 'ENSG00000173867', 'score': 4.96}, {'connected_gene': 'PIR61736', 'score': 0.77}]
chr15	GH15I088547	88547570	88547628	0.2	[{'connected_gene': 'DET1', 'score': 550.77}, {'connected_gene': 'ENSG00000259569', 'score': 0.34}]
chr15	GH15I088562	88562862	88564412	0.84	[{'connected_gene': 'POLG', 'score': 12.8}, {'connected_gene': 'FANCI', 'score': 12.53}, {'connected_gene': 'LINC01586', 'score': 7.32}, {'connected_gene': 'ISG20', 'score': 4.78}, {'connected_gene': 'ENSG00000173867', 'score': 4.78}, {'connected_gene': 'ENSG00000259569', 'score': 0.77}, {'connected_gene': 'DET1', 'score': 0.37}]
chr15	GH15I089124	89124978	89141178	1.74	[{'connected_gene': 'ABHD2', 'score': 37.68}, {'connected_gene': 'LOC102724566', 'score': 10.78}, {'connected_gene': 'DET1', 'score': 6.08}, {'connected_gene': 'ISG20', 'score': 1.35}, {'connected_gene': 'HMGB1P8', 'score': 0.77}, {'connected_gene': 'GC15M089136', 'score': 0.77}, {'connected_gene': 'RNU7-195P', 'score': 0.39}]
chr15	GH15I089383	89383250	89384159	1.12	[{'connected_gene': 'RPL36AP43', 'score': 76.42}, {'connected_gene': 'NIFKP5', 'score': 74.01}, {'connected_gene': 'ENSG00000173867', 'score': 53.41}, {'connected_gene': 'ARPIN', 'score': 44.74}, {'connected_gene': 'ENSG00000228998', 'score': 18.96}, {'connected_gene': 'POLG', 'score': 11.22}, {'connected_gene': 'WDR93', 'score': 10.9}, {'connected_gene': 'DET1', 'score': 9.75}, {'connected_gene': 'MIR9-3HG', 'score': 9.02}, {'connected_gene': 'GC15P089381', 'score': 0.77}, {'connected_gene': 'PIR56199', 'score': 0.39}]
chr15	GH15I088541	88541380	88544245	0.82	[{'connected_gene': 'PIR61736', 'score': 550.77}, {'connected_gene': 'DET1', 'score': 11.09}, {'connected_gene': 'ENSG00000173867', 'score': 4.94}]
chr15	GH15I088535	88535999	88536920	0.82	[{'connected_gene': 'PIR61736', 'score': 0.44}, {'connected_gene': 'DET1', 'score': 0.39}, {'connected_gene': 'ENSG00000173867', 'score': 0.34}]
chr15	GH15I089412	89412870	89413666	0.49	[{'connected_gene': 'ENSG00000173867', 'score': 19.85}, {'connected_gene': 'RPL36AP43', 'score': 13.69}, {'connected_gene': 'MIR9-3', 'score': 12.36}, {'connected_gene': 'MIR9-3HG', 'score': 12.35}, {'connected_gene': 'KIF7', 'score': 12.28}, {'connected_gene': 'DET1', 'score': 12.03}, {'connected_gene': 'ARPIN', 'score': 10.07}, {'connected_gene': 'GC15M089390', 'score': 0.39}, {'connected_gene': 'LOC105371031', 'score': 0.39}]
chr15	GH15I089204	89204503	89205625	0.31	[{'connected_gene': 'GC15P089217', 'score': 550.77}, {'connected_gene': 'GC15P089216', 'score': 550.77}, {'connected_gene': 'GC15P089215', 'score': 550.77}, {'connected_gene': 'ENSG00000173867', 'score': 19.85}, {'connected_gene': 'RPL36AP43', 'score': 13.67}, {'connected_gene': 'KIF7', 'score': 12.26}, {'connected_gene': 'DET1', 'score': 12.04}, {'connected_gene': 'FANCI', 'score': 11.87}, {'connected_gene': 'ARPIN', 'score': 10.05}, {'connected_gene': 'POLG', 'score': 9.98}]