PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369287	[[115880620, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923088], [115933773, 115933979]]	[[115884901, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923027]]
ENST00000543782	[[115884687, 115884985], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904361]]	[[115884954, 115884985], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904270]]
ENST00000428953	[[115884687, 115884985], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904361]]	[[115884954, 115884985], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904361]]
ENST00000497592	[[115889957, 115890428], [115890905, 115891095]]	None
ENST00000490661	[[115890784, 115891095], [115891687, 115891853]]	None
ENST00000369285	[[115921366, 115923088], [115932899, 115933024], [115933773, 115933961]]	[[115922391, 115923027]]
ENST00000369286	[[115921366, 115923088], [115933773, 115933979]]	[[115922391, 115923027]]
NR_135815	[[115880620, 115884985], [115885644, 115885864], [115889649, 115890428], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923088], [115932899, 115933024], [115933773, 115933979]]	None
NM_001321829	[[115880620, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923088], [115932899, 115933024], [115933773, 115933979]]	[[115884901, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923027]]
NM_018017	[[115880620, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923088], [115933773, 115933979]]	[[115884901, 115884985], [115885644, 115885864], [115887219, 115887430], [115889649, 115889730], [115890905, 115891095], [115891687, 115891943], [115894671, 115894814], [115895649, 115895736], [115895906, 115896005], [115896944, 115897049], [115904255, 115904375], [115905307, 115905520], [115910850, 115910979], [115917312, 115917439], [115922395, 115923027]]
NM_153249	[[115921366, 115923088], [115932899, 115933024], [115933773, 115933979]]	[[115922391, 115923027]]

Promoter

Chrom	Start	End	Description
chr10	115904361	115904375	CAGE_peak_2_at_C10orf118_5end
chr10	115933942	115933996	CAGE_peak_1_at_C10orf118_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I113851	113851174	113857105	2.26	[{'connected_gene': 'DCLRE1A', 'score': 558.96}, {'connected_gene': 'NHLRC2', 'score': 550.77}, {'connected_gene': 'CCDC186', 'score': 22.01}, {'connected_gene': 'FAM160B1', 'score': 12.84}, {'connected_gene': 'LOC105378488', 'score': 10.71}, {'connected_gene': 'TCF7L2', 'score': 10.45}, {'connected_gene': 'ENSG00000212589', 'score': 0.29}]
chr10	GH10I113678	113678582	113682698	2.57	[{'connected_gene': 'CASP7', 'score': 593.07}, {'connected_gene': 'LOC105378488', 'score': 10.71}, {'connected_gene': 'CCDC186', 'score': 10.09}, {'connected_gene': 'ENSG00000234393', 'score': 0.28}]
chr10	GH10I114163	114163863	114164139	0.39	[{'connected_gene': 'PLEKHS1', 'score': 2.79}, {'connected_gene': 'ENSG00000273904', 'score': 0.77}, {'connected_gene': 'CCDC186', 'score': 0.39}, {'connected_gene': 'UBE2V1P5', 'score': 0.25}]
chr10	GH10I114647	114647149	114649122	1.3	[{'connected_gene': 'FAM160B1', 'score': 15.72}, {'connected_gene': 'CCDC186', 'score': 12.61}, {'connected_gene': 'PPIAP19', 'score': 0.26}, {'connected_gene': 'ENSG00000229668', 'score': 0.11}, {'connected_gene': 'ABLIM1', 'score': 0.09}]
chr10	GH10I114228	114228302	114228451	0.38	[{'connected_gene': 'TDRD1', 'score': 11.14}, {'connected_gene': 'PLEKHS1', 'score': 8.68}, {'connected_gene': 'VWA2', 'score': 0.39}, {'connected_gene': 'CCDC186', 'score': 0.23}]
chr10	GH10I114181	114181716	114183299	0.93	[{'connected_gene': 'TDRD1', 'score': 550.44}, {'connected_gene': 'CCDC186', 'score': 0.44}, {'connected_gene': 'VWA2', 'score': 0.22}]
chr10	GH10I114179	114179304	114179363	0.86	[{'connected_gene': 'TDRD1', 'score': 550.77}, {'connected_gene': 'CCDC186', 'score': 0.77}, {'connected_gene': 'VWA2', 'score': 0.22}]
chr10	GH10I114130	114130842	114131598	0.31	[{'connected_gene': 'TDRD1', 'score': 10.85}, {'connected_gene': 'VWA2', 'score': 10.28}, {'connected_gene': 'PLEKHS1', 'score': 10.15}, {'connected_gene': 'UBE2V1P5', 'score': 0.39}, {'connected_gene': 'ENSG00000273904', 'score': 0.28}, {'connected_gene': 'CCDC186', 'score': 0.26}]
chr10	GH10I114150	114150949	114152403	0.52	[{'connected_gene': 'TDRD1', 'score': 21.5}, {'connected_gene': 'VWA2', 'score': 19.56}, {'connected_gene': 'RNU6-709P', 'score': 11.51}, {'connected_gene': 'ADRB1', 'score': 10.09}, {'connected_gene': 'ENSG00000273904', 'score': 0.37}, {'connected_gene': 'CCDC186', 'score': 0.34}, {'connected_gene': 'UBE2V1P5', 'score': 0.29}]
chr10	GH10I114171	114171806	114175451	2.01	[{'connected_gene': 'TDRD1', 'score': 560.45}, {'connected_gene': 'MIR2110', 'score': 550.77}, {'connected_gene': 'GC10M114175', 'score': 550.77}, {'connected_gene': 'CCDC186', 'score': 550.77}, {'connected_gene': 'VWA2', 'score': 8.93}, {'connected_gene': 'ENSG00000273904', 'score': 0.44}]
chr10	GH10I114649	114649601	114649800	0.98	[{'connected_gene': 'CCDC186', 'score': 13.7}, {'connected_gene': 'PPIAP19', 'score': 0.26}, {'connected_gene': 'ENSG00000229668', 'score': 0.11}, {'connected_gene': 'ABLIM1', 'score': 0.09}]
chr10	GH10I115050	115050239	115051569	0.54	[{'connected_gene': 'CCDC186', 'score': 10.03}, {'connected_gene': 'GC10P115026', 'score': 0.34}, {'connected_gene': 'LOC105378496', 'score': 0.28}]
chr10	GH10I114751	114751679	114752647	0.54	[{'connected_gene': 'CCDC186', 'score': 13.14}, {'connected_gene': 'LOC101927692', 'score': 0.39}, {'connected_gene': 'PPIAP19', 'score': 0.21}, {'connected_gene': 'ABLIM1', 'score': 0.2}]
chr10	GH10I114537	114537874	114545575	1.4	[{'connected_gene': 'ABLIM1', 'score': 23.87}, {'connected_gene': 'CCDC186', 'score': 2.07}, {'connected_gene': 'FAM160B1', 'score': 1.42}, {'connected_gene': 'ENSG00000229668', 'score': 0.28}, {'connected_gene': 'PPIAP19', 'score': 0.11}]
chr10	GH10I114595	114595651	114598126	0.46	[{'connected_gene': 'ABLIM1', 'score': 11.64}, {'connected_gene': 'CCDC186', 'score': 9.79}, {'connected_gene': 'PPIAP19', 'score': 0.16}, {'connected_gene': 'ENSG00000229668', 'score': 0.16}]
chr10	GH10I114496	114496547	114501492	1.84	[{'connected_gene': 'ABLIM1', 'score': 569.85}, {'connected_gene': 'CCDC186', 'score': 1.59}, {'connected_gene': 'ENSG00000229668', 'score': 0.77}, {'connected_gene': 'GC10M114474', 'score': 0.34}]
chr10	GH10I114239	114239085	114240450	1.48	[{'connected_gene': 'VWA2', 'score': 550.77}, {'connected_gene': 'TDRD1', 'score': 16.52}, {'connected_gene': 'FAM160B1', 'score': 12.97}, {'connected_gene': 'CCDC186', 'score': 12.77}, {'connected_gene': 'AURKAPS2', 'score': 0.44}]
chr10	GH10I114042	114042482	114047579	1.54	[{'connected_gene': 'ADRB1', 'score': 557.93}, {'connected_gene': 'GC10P114045', 'score': 550.77}, {'connected_gene': 'GC10M114041', 'score': 550.77}, {'connected_gene': 'CCDC186', 'score': 13.78}]
chr10	GH10I114165	114165677	114166887	0.62	[{'connected_gene': 'ENSG00000273904', 'score': 550.77}, {'connected_gene': 'VWA2', 'score': 8.91}, {'connected_gene': 'TDRD1', 'score': 6.44}, {'connected_gene': 'CCDC186', 'score': 0.44}, {'connected_gene': 'UBE2V1P5', 'score': 0.25}]