Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000373884 [[28285972, 28286873], [28290007, 28290204], [28293013, 28294607]] [[28286580, 28286873], [28290007, 28290204], [28293013, 28293711]]
ENST00000481387 [[28290147, 28290204], [28290695, 28290746], [28293013, 28293221]] None
NM_018053 [[28285972, 28286873], [28290007, 28290204], [28293013, 28294607]] [[28286580, 28286873], [28290007, 28290204], [28293013, 28293711]]
Promoter
Chrom Start End Description
chr1 28286476 28286549 CAGE_peak_1_at_XKR8_5end
chr1 28286550 28286561 CAGE_peak_4_at_XKR8_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr1 GH01I028135 28135002 28136737 1.42 [{'connected_gene': 'THEMIS2', 'score': 21.45}, {'connected_gene': 'ENSG00000270605', 'score': 13.74}, {'connected_gene': 'PTAFR', 'score': 13.61}, {'connected_gene': 'XKR8', 'score': 12.63}, {'connected_gene': 'PHACTR4', 'score': 7.2}, {'connected_gene': 'MED18', 'score': 4.12}, {'connected_gene': 'SESN2', 'score': 3.53}, {'connected_gene': 'EYA3', 'score': 2.89}, {'connected_gene': 'STX12', 'score': 2.66}, {'connected_gene': 'FAM76A', 'score': 1.21}, {'connected_gene': 'RNU6-176P', 'score': 0.44}, {'connected_gene': 'LOC100131223', 'score': 0.39}]
chr1 GH01I027871 27871950 27877297 2.48 [{'connected_gene': 'THEMIS2', 'score': 576.94}, {'connected_gene': 'FGR', 'score': 30.33}, {'connected_gene': 'RPA2', 'score': 24.09}, {'connected_gene': 'XKR8', 'score': 21.9}, {'connected_gene': 'EYA3', 'score': 17.81}, {'connected_gene': 'PTAFR', 'score': 14.19}, {'connected_gene': 'PPP1R8', 'score': 11.02}, {'connected_gene': 'SCARNA1', 'score': 11.02}, {'connected_gene': 'RNU6-1245P', 'score': 10.99}, {'connected_gene': 'SESN2', 'score': 6.79}, {'connected_gene': 'MED18', 'score': 6.41}, {'connected_gene': 'SMPDL3B', 'score': 6.03}, {'connected_gene': 'ENSG00000269971', 'score': 5.21}, {'connected_gene': 'STX12', 'score': 4.22}, {'connected_gene': 'WASF2', 'score': 3.29}, {'connected_gene': 'GC01M027883', 'score': 0.44}]
chr1 GH01I027881 27881966 27893655 1.53 [{'connected_gene': 'RPA2', 'score': 33.93}, {'connected_gene': 'XKR8', 'score': 23.61}, {'connected_gene': 'THEMIS2', 'score': 22.29}, {'connected_gene': 'SMPDL3B', 'score': 22.13}, {'connected_gene': 'ENSG00000227050', 'score': 12.06}, {'connected_gene': 'EYA3', 'score': 11.17}, {'connected_gene': 'SCARNA1', 'score': 10.82}, {'connected_gene': 'PPP1R8', 'score': 10.81}, {'connected_gene': 'RNU6-1245P', 'score': 10.8}, {'connected_gene': 'FGR', 'score': 9.8}, {'connected_gene': 'PTAFR', 'score': 9.35}, {'connected_gene': 'SNHG12', 'score': 5.04}, {'connected_gene': 'MED18', 'score': 4.75}, {'connected_gene': 'SESN2', 'score': 3.63}, {'connected_gene': 'WASF2', 'score': 2.16}, {'connected_gene': 'STX12', 'score': 1.21}, {'connected_gene': 'GC01M027883', 'score': 0.77}]
chr1 GH01I027605 27605802 27611097 1.76 [{'connected_gene': 'ACTG1P20', 'score': 36.82}, {'connected_gene': 'ARID1A', 'score': 35.73}, {'connected_gene': 'TRNAU1AP', 'score': 33.99}, {'connected_gene': 'SNHG12', 'score': 32.16}, {'connected_gene': 'NPM1P39', 'score': 29.85}, {'connected_gene': 'PHACTR4', 'score': 23.29}, {'connected_gene': 'SNORA73B', 'score': 19.8}, {'connected_gene': 'ENSG00000231344', 'score': 19.29}, {'connected_gene': 'MAP3K6', 'score': 13.28}, {'connected_gene': 'WASF2', 'score': 13.25}, {'connected_gene': 'FAM76A', 'score': 12.44}, {'connected_gene': 'AHDC1', 'score': 11.87}, {'connected_gene': 'RCC1', 'score': 10.85}, {'connected_gene': 'LOC101928728', 'score': 10.78}, {'connected_gene': 'RAB42', 'score': 10.6}, {'connected_gene': 'DNAJC8', 'score': 10.3}, {'connected_gene': 'SNHG3', 'score': 10.2}, {'connected_gene': 'GPN2', 'score': 10.19}, {'connected_gene': 'EYA3', 'score': 10.17}, {'connected_gene': 'FAM46B', 'score': 10.1}, {'connected_gene': 'FGR', 'score': 7.95}, {'connected_gene': 'THEMIS2', 'score': 4.37}, {'connected_gene': 'SLC9A1', 'score': 1.67}, {'connected_gene': 'XKR8', 'score': 1.54}, {'connected_gene': 'SYTL1', 'score': 1.35}]
chr1 GH01I027588 27588374 27596962 1.53 [{'connected_gene': 'ACTG1P20', 'score': 21.91}, {'connected_gene': 'DNAJC8', 'score': 19.22}, {'connected_gene': 'EYA3', 'score': 18.49}, {'connected_gene': 'GPN2', 'score': 14.19}, {'connected_gene': 'FAM76A', 'score': 11.29}, {'connected_gene': 'ARID1A', 'score': 10.81}, {'connected_gene': 'LOC101928728', 'score': 10.78}, {'connected_gene': 'RNU6-48P', 'score': 10.65}, {'connected_gene': 'TMEM222', 'score': 10.64}, {'connected_gene': 'PPP1R8', 'score': 10.31}, {'connected_gene': 'AHDC1', 'score': 3.28}, {'connected_gene': 'XKR8', 'score': 2.07}, {'connected_gene': 'GC01P027602', 'score': 0.44}, {'connected_gene': 'LOC105376892', 'score': 0.19}]
chr1 GH01I028139 28139022 28140051 1.28 [{'connected_gene': 'PTAFR', 'score': 21.01}, {'connected_gene': 'THEMIS2', 'score': 7.9}, {'connected_gene': 'SESN2', 'score': 5.43}, {'connected_gene': 'ENSG00000270605', 'score': 5.41}, {'connected_gene': 'EYA3', 'score': 5.22}, {'connected_gene': 'PHACTR4', 'score': 4.55}, {'connected_gene': 'STX12', 'score': 3.63}, {'connected_gene': 'MED18', 'score': 2.52}, {'connected_gene': 'XKR8', 'score': 2.3}, {'connected_gene': 'DNAJC8', 'score': 1.27}, {'connected_gene': 'RNU6-176P', 'score': 0.77}, {'connected_gene': 'LOC100131223', 'score': 0.37}]
chr1 GH01I028171 28171201 28177600 2.23 [{'connected_gene': 'PTAFR', 'score': 594.84}, {'connected_gene': 'SNHG12', 'score': 44.9}, {'connected_gene': 'GMEB1', 'score': 40.89}, {'connected_gene': 'TRNAU1AP', 'score': 37.15}, {'connected_gene': 'ACTG1P20', 'score': 33.17}, {'connected_gene': 'YTHDF2', 'score': 32.42}, {'connected_gene': 'PHACTR4', 'score': 32.4}, {'connected_gene': 'NPM1P39', 'score': 30.96}, {'connected_gene': 'SNORA73B', 'score': 28.9}, {'connected_gene': 'ENSG00000231344', 'score': 27.27}, {'connected_gene': 'WASF2', 'score': 23.5}, {'connected_gene': 'RCC1', 'score': 20.04}, {'connected_gene': 'RAB42', 'score': 19.45}, {'connected_gene': 'SNHG3', 'score': 18.83}, {'connected_gene': 'THEMIS2', 'score': 16.94}, {'connected_gene': 'MAP3K6', 'score': 13.24}, {'connected_gene': 'TMEM200B', 'score': 12.98}, {'connected_gene': 'XKR8', 'score': 9.62}, {'connected_gene': 'SESN2', 'score': 9.12}, {'connected_gene': 'EYA3', 'score': 6.31}, {'connected_gene': 'MED18', 'score': 5.54}, {'connected_gene': 'STX12', 'score': 2.9}, {'connected_gene': 'PIR61473', 'score': 0.31}]
chr1 GH01I028170 28170046 28170293 1.17 [{'connected_gene': 'PTAFR', 'score': 10.72}, {'connected_gene': 'SESN2', 'score': 9.67}, {'connected_gene': 'GMEB1', 'score': 7.62}, {'connected_gene': 'EYA3', 'score': 5.81}, {'connected_gene': 'THEMIS2', 'score': 4.77}, {'connected_gene': 'MED18', 'score': 3.93}, {'connected_gene': 'STX12', 'score': 3.01}, {'connected_gene': 'XKR8', 'score': 1.95}, {'connected_gene': 'PIR61473', 'score': 0.34}]
chr1 GH01I028152 28152951 28155201 1.58 [{'connected_gene': 'PTAFR', 'score': 24.63}, {'connected_gene': 'XKR8', 'score': 17.23}, {'connected_gene': 'THEMIS2', 'score': 15.1}, {'connected_gene': 'EYA3', 'score': 14.58}, {'connected_gene': 'DNAJC8', 'score': 10.67}, {'connected_gene': 'ATP5IF1', 'score': 10.66}, {'connected_gene': 'SESN2', 'score': 5.16}, {'connected_gene': 'MED18', 'score': 3.19}, {'connected_gene': 'STX12', 'score': 2.44}, {'connected_gene': 'PIR61473', 'score': 0.44}]
chr1 GH01I028159 28159567 28162243 1.33 [{'connected_gene': 'PTAFR', 'score': 31.77}, {'connected_gene': 'XKR8', 'score': 19.06}, {'connected_gene': 'ACTG1P20', 'score': 15.41}, {'connected_gene': 'EYA3', 'score': 15.26}, {'connected_gene': 'SNHG12', 'score': 14.69}, {'connected_gene': 'TRNAU1AP', 'score': 13.81}, {'connected_gene': 'THEMIS2', 'score': 13.14}, {'connected_gene': 'FAM76A', 'score': 13.11}, {'connected_gene': 'TMEM200B', 'score': 12.61}, {'connected_gene': 'NPM1P39', 'score': 11.46}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'PHACTR4', 'score': 10.64}, {'connected_gene': 'ENSG00000231344', 'score': 10.37}, {'connected_gene': 'SESN2', 'score': 5.34}, {'connected_gene': 'STX12', 'score': 4.3}, {'connected_gene': 'MED18', 'score': 3.28}, {'connected_gene': 'PIR61473', 'score': 0.39}]
chr1 GH01I028156 28156601 28157400 0.95 [{'connected_gene': 'PTAFR', 'score': 30.83}, {'connected_gene': 'ENSG00000270605', 'score': 19.97}, {'connected_gene': 'EYA3', 'score': 18.19}, {'connected_gene': 'THEMIS2', 'score': 11.08}, {'connected_gene': 'SESN2', 'score': 7.75}, {'connected_gene': 'XKR8', 'score': 5.0}, {'connected_gene': 'STX12', 'score': 4.62}, {'connected_gene': 'MED18', 'score': 3.67}, {'connected_gene': 'DNAJC8', 'score': 1.42}, {'connected_gene': 'PIR61473', 'score': 0.44}]
chr1 GH01I028110 28110402 28114799 1.68 [{'connected_gene': 'PTAFR', 'score': 27.96}, {'connected_gene': 'EYA3', 'score': 23.47}, {'connected_gene': 'SNHG12', 'score': 19.22}, {'connected_gene': 'FGR', 'score': 18.02}, {'connected_gene': 'GMEB1', 'score': 15.08}, {'connected_gene': 'ACTG1P20', 'score': 14.96}, {'connected_gene': 'TRNAU1AP', 'score': 14.0}, {'connected_gene': 'RNU7-29P', 'score': 12.81}, {'connected_gene': 'RNU6-176P', 'score': 12.81}, {'connected_gene': 'PHACTR4', 'score': 11.42}, {'connected_gene': 'SNORA73B', 'score': 11.15}, {'connected_gene': 'YTHDF2', 'score': 11.14}, {'connected_gene': 'SNHG3', 'score': 10.22}, {'connected_gene': 'NPM1P39', 'score': 10.12}, {'connected_gene': 'ENSG00000231344', 'score': 10.05}, {'connected_gene': 'THEMIS2', 'score': 9.46}, {'connected_gene': 'SCARNA1', 'score': 9.26}, {'connected_gene': 'RNU6-1245P', 'score': 8.96}, {'connected_gene': 'PPP1R8', 'score': 8.96}, {'connected_gene': 'SESN2', 'score': 8.84}, {'connected_gene': 'RPA2', 'score': 6.9}, {'connected_gene': 'STX12', 'score': 4.88}, {'connected_gene': 'ENSG00000270605', 'score': 4.7}, {'connected_gene': 'MED18', 'score': 4.58}, {'connected_gene': 'DNAJC8', 'score': 1.93}, {'connected_gene': 'XKR8', 'score': 1.42}, {'connected_gene': 'ENSG00000228943', 'score': 0.77}, {'connected_gene': 'LOC100131223', 'score': 0.44}]
chr1 GH01I028160 28159105 28159538 1.01 [{'connected_gene': 'PTAFR', 'score': 27.4}, {'connected_gene': 'EYA3', 'score': 17.43}, {'connected_gene': 'ACTG1P20', 'score': 15.41}, {'connected_gene': 'SNHG12', 'score': 14.69}, {'connected_gene': 'TRNAU1AP', 'score': 13.81}, {'connected_gene': 'FAM76A', 'score': 13.11}, {'connected_gene': 'TMEM200B', 'score': 12.61}, {'connected_gene': 'NPM1P39', 'score': 11.46}, {'connected_gene': 'THEMIS2', 'score': 11.38}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'PHACTR4', 'score': 10.64}, {'connected_gene': 'ENSG00000231344', 'score': 10.37}, {'connected_gene': 'SESN2', 'score': 8.42}, {'connected_gene': 'STX12', 'score': 4.81}, {'connected_gene': 'XKR8', 'score': 4.05}, {'connected_gene': 'MED18', 'score': 3.91}, {'connected_gene': 'DNAJC8', 'score': 1.61}, {'connected_gene': 'PIR61473', 'score': 0.39}]
chr1 GH01I028122 28122801 28124459 1.32 [{'connected_gene': 'PTAFR', 'score': 33.95}, {'connected_gene': 'EYA3', 'score': 24.73}, {'connected_gene': 'DNAJC8', 'score': 21.0}, {'connected_gene': 'FGR', 'score': 13.33}, {'connected_gene': 'ATP5IF1', 'score': 10.39}, {'connected_gene': 'PHACTR4', 'score': 9.73}, {'connected_gene': 'SESN2', 'score': 9.17}, {'connected_gene': 'THEMIS2', 'score': 9.16}, {'connected_gene': 'SCARNA1', 'score': 8.98}, {'connected_gene': 'RNU6-1245P', 'score': 8.97}, {'connected_gene': 'PPP1R8', 'score': 8.97}, {'connected_gene': 'STX12', 'score': 5.26}, {'connected_gene': 'MAP3K6', 'score': 4.63}, {'connected_gene': 'MED18', 'score': 3.91}, {'connected_gene': 'XKR8', 'score': 2.38}, {'connected_gene': 'LOC100131223', 'score': 0.77}, {'connected_gene': 'RNU6-176P', 'score': 0.37}]
chr1 GH01I028125 28125401 28129859 1.48 [{'connected_gene': 'PTAFR', 'score': 25.41}, {'connected_gene': 'EYA3', 'score': 21.07}, {'connected_gene': 'DNAJC8', 'score': 12.45}, {'connected_gene': 'FGR', 'score': 11.23}, {'connected_gene': 'ATP5IF1', 'score': 11.06}, {'connected_gene': 'PPP1R8', 'score': 9.17}, {'connected_gene': 'SCARNA1', 'score': 9.17}, {'connected_gene': 'RNU6-1245P', 'score': 9.16}, {'connected_gene': 'THEMIS2', 'score': 7.05}, {'connected_gene': 'SESN2', 'score': 5.7}, {'connected_gene': 'STX12', 'score': 4.32}, {'connected_gene': 'MED18', 'score': 2.8}, {'connected_gene': 'XKR8', 'score': 1.32}, {'connected_gene': 'LOC100131223', 'score': 0.44}, {'connected_gene': 'RNU6-176P', 'score': 0.37}]
chr1 GH01I027958 27958677 27961836 1.99 [{'connected_gene': 'XKR8', 'score': 556.79}, {'connected_gene': 'ENSG00000227050', 'score': 550.77}, {'connected_gene': 'ACTG1P20', 'score': 24.73}, {'connected_gene': 'SNHG12', 'score': 15.64}, {'connected_gene': 'TRNAU1AP', 'score': 15.6}, {'connected_gene': 'NPM1P39', 'score': 15.03}, {'connected_gene': 'GMEB1', 'score': 14.44}, {'connected_gene': 'YTHDF2', 'score': 13.33}, {'connected_gene': 'FAM76A', 'score': 12.96}, {'connected_gene': 'ENSG00000231344', 'score': 12.33}, {'connected_gene': 'PHACTR4', 'score': 10.79}, {'connected_gene': 'MAP3K6', 'score': 10.33}, {'connected_gene': 'EYA3', 'score': 10.22}, {'connected_gene': 'SNORA73B', 'score': 10.13}, {'connected_gene': 'GC01M027972', 'score': 0.39}, {'connected_gene': 'PIR37901', 'score': 0.39}, {'connected_gene': 'SMPDL3B', 'score': 0.31}]
chr1 GH01I027952 27952290 27952439 0.59 [{'connected_gene': 'XKR8', 'score': 0.44}, {'connected_gene': 'ENSG00000227050', 'score': 0.44}, {'connected_gene': 'SMPDL3B', 'score': 0.37}]
chr1 GH01I028313 28313209 28315799 1.57 [{'connected_gene': 'XKR8', 'score': 20.84}, {'connected_gene': 'FAM76A', 'score': 18.92}, {'connected_gene': 'THEMIS2', 'score': 15.92}, {'connected_gene': 'PHACTR4', 'score': 14.69}, {'connected_gene': 'AHDC1', 'score': 14.54}, {'connected_gene': 'PPP1R8', 'score': 12.97}, {'connected_gene': 'ACTG1P20', 'score': 11.45}, {'connected_gene': 'TRNAU1AP', 'score': 9.99}, {'connected_gene': 'TMEM200B', 'score': 9.78}, {'connected_gene': 'PTAFR', 'score': 5.92}, {'connected_gene': 'MED18', 'score': 5.22}, {'connected_gene': 'SESN2', 'score': 5.0}, {'connected_gene': 'GMEB1', 'score': 2.36}, {'connected_gene': 'TAF12', 'score': 1.61}, {'connected_gene': 'EYA3', 'score': 1.49}]
chr1 GH01I027866 27866972 27870307 1.66 [{'connected_gene': 'XKR8', 'score': 31.13}, {'connected_gene': 'GMEB1', 'score': 28.51}, {'connected_gene': 'WASF2', 'score': 18.38}, {'connected_gene': 'THEMIS2', 'score': 17.86}, {'connected_gene': 'TRNAU1AP', 'score': 15.04}, {'connected_gene': 'EYA3', 'score': 13.55}, {'connected_gene': 'SNHG12', 'score': 13.48}, {'connected_gene': 'TAF12', 'score': 13.34}, {'connected_gene': 'RPA2', 'score': 12.83}, {'connected_gene': 'YTHDF2', 'score': 12.15}, {'connected_gene': 'NPM1P39', 'score': 11.79}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'MAP3K6', 'score': 10.52}, {'connected_gene': 'GPN2', 'score': 9.83}, {'connected_gene': 'FGR', 'score': 8.98}, {'connected_gene': 'PTAFR', 'score': 7.37}, {'connected_gene': 'MED18', 'score': 4.62}, {'connected_gene': 'SESN2', 'score': 3.98}, {'connected_gene': 'PIR39917', 'score': 0.37}]
chr1 GH01I027941 27941590 27944728 1.48 [{'connected_gene': 'SMPDL3B', 'score': 39.68}, {'connected_gene': 'THEMIS2', 'score': 29.78}, {'connected_gene': 'PTAFR', 'score': 23.54}, {'connected_gene': 'FGR', 'score': 17.34}, {'connected_gene': 'XKR8', 'score': 17.19}, {'connected_gene': 'RPA2', 'score': 10.73}, {'connected_gene': 'SESN2', 'score': 4.63}, {'connected_gene': 'MED18', 'score': 4.54}, {'connected_gene': 'EYA3', 'score': 4.12}, {'connected_gene': 'WASF2', 'score': 4.04}, {'connected_gene': 'STX12', 'score': 3.36}, {'connected_gene': 'ENSG00000227050', 'score': 0.37}]
chr1 GH01I027936 27936826 27938008 0.62 [{'connected_gene': 'SMPDL3B', 'score': 25.48}, {'connected_gene': 'XKR8', 'score': 0.34}]
chr1 GH01I027940 27940001 27941047 0.66 [{'connected_gene': 'SMPDL3B', 'score': 0.44}, {'connected_gene': 'XKR8', 'score': 0.37}, {'connected_gene': 'ENSG00000227050', 'score': 0.37}]
chr1 GH01I027893 27893707 27895323 0.2 [{'connected_gene': 'SMPDL3B', 'score': 21.2}, {'connected_gene': 'PPP1R8', 'score': 16.72}, {'connected_gene': 'THEMIS2', 'score': 12.83}, {'connected_gene': 'XKR8', 'score': 12.08}, {'connected_gene': 'ENSG00000227050', 'score': 12.07}, {'connected_gene': 'RPA2', 'score': 11.55}, {'connected_gene': 'SCARNA1', 'score': 10.8}, {'connected_gene': 'RNU6-1245P', 'score': 10.79}, {'connected_gene': 'EYA3', 'score': 10.11}, {'connected_gene': 'SNHG12', 'score': 4.79}, {'connected_gene': 'GC01M027883', 'score': 0.39}]
chr1 GH01I027896 27896167 27897522 0.43 [{'connected_gene': 'SMPDL3B', 'score': 35.09}, {'connected_gene': 'PPP1R8', 'score': 16.71}, {'connected_gene': 'THEMIS2', 'score': 12.83}, {'connected_gene': 'ENSG00000227050', 'score': 12.08}, {'connected_gene': 'XKR8', 'score': 12.08}, {'connected_gene': 'SCARNA1', 'score': 10.8}, {'connected_gene': 'RNU6-1245P', 'score': 10.78}, {'connected_gene': 'EYA3', 'score': 10.11}, {'connected_gene': 'GC01M027883', 'score': 0.39}, {'connected_gene': 'RPA2', 'score': 0.37}]
chr1 GH01I027934 27934430 27936200 1.52 [{'connected_gene': 'SMPDL3B', 'score': 595.74}, {'connected_gene': 'TRNAU1AP', 'score': 15.29}, {'connected_gene': 'TMEM222', 'score': 13.4}, {'connected_gene': 'GMEB1', 'score': 13.24}, {'connected_gene': 'SNHG12', 'score': 13.19}, {'connected_gene': 'MAP3K6', 'score': 12.23}, {'connected_gene': 'ACTG1P20', 'score': 11.78}, {'connected_gene': 'FAM76A', 'score': 11.05}, {'connected_gene': 'YTHDF2', 'score': 11.02}, {'connected_gene': 'ENSG00000231344', 'score': 10.61}, {'connected_gene': 'XKR8', 'score': 0.34}]
chr1 GH01I027596 27596981 27605339 2.5 [{'connected_gene': 'AHDC1', 'score': 553.33}, {'connected_gene': 'GC01P027602', 'score': 550.77}, {'connected_gene': 'GPN2', 'score': 32.33}, {'connected_gene': 'ARID1A', 'score': 28.61}, {'connected_gene': 'ACTG1P20', 'score': 21.93}, {'connected_gene': 'LOC101928728', 'score': 20.41}, {'connected_gene': 'FAM76A', 'score': 19.92}, {'connected_gene': 'DNAJC8', 'score': 19.22}, {'connected_gene': 'EYA3', 'score': 18.2}, {'connected_gene': 'PIGV', 'score': 13.67}, {'connected_gene': 'RCC1', 'score': 12.04}, {'connected_gene': 'LOC105376892', 'score': 11.97}, {'connected_gene': 'TRNAU1AP', 'score': 11.57}, {'connected_gene': 'GPATCH3', 'score': 11.42}, {'connected_gene': 'SNHG12', 'score': 10.19}, {'connected_gene': 'ENSG00000231344', 'score': 10.04}, {'connected_gene': 'CD164L2', 'score': 7.12}, {'connected_gene': 'XKR8', 'score': 1.6}]
chr1 GH01I027862 27862001 27866399 1.56 [{'connected_gene': 'FGR', 'score': 26.47}, {'connected_gene': 'THEMIS2', 'score': 17.45}, {'connected_gene': 'PTAFR', 'score': 15.32}, {'connected_gene': 'XKR8', 'score': 7.69}, {'connected_gene': 'MED18', 'score': 4.75}, {'connected_gene': 'SESN2', 'score': 4.31}, {'connected_gene': 'STX12', 'score': 3.58}, {'connected_gene': 'EYA3', 'score': 3.39}, {'connected_gene': 'WASF2', 'score': 3.2}, {'connected_gene': 'PIR39917', 'score': 0.39}]
chr1 GH01I027614 27614139 27637536 2.72 [{'connected_gene': 'FGR', 'score': 579.49}, {'connected_gene': 'ACTG1P20', 'score': 43.35}, {'connected_gene': 'ARID1A', 'score': 27.33}, {'connected_gene': 'EYA3', 'score': 25.18}, {'connected_gene': 'FAM76A', 'score': 22.52}, {'connected_gene': 'TRNAU1AP', 'score': 21.88}, {'connected_gene': 'NPM1P39', 'score': 21.49}, {'connected_gene': 'THEMIS2', 'score': 17.55}, {'connected_gene': 'PTAFR', 'score': 15.09}, {'connected_gene': 'SNHG12', 'score': 14.88}, {'connected_gene': 'GPN2', 'score': 14.19}, {'connected_gene': 'WASF2', 'score': 14.05}, {'connected_gene': 'PHACTR4', 'score': 13.71}, {'connected_gene': 'MAP3K6', 'score': 13.28}, {'connected_gene': 'ENSG00000225886', 'score': 12.23}, {'connected_gene': 'AHDC1', 'score': 11.44}, {'connected_gene': 'ENSG00000231344', 'score': 11.0}, {'connected_gene': 'RCC1', 'score': 10.85}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'RAB42', 'score': 10.6}, {'connected_gene': 'SNORA73B', 'score': 10.41}, {'connected_gene': 'XKR8', 'score': 10.31}, {'connected_gene': 'RNU6-48P', 'score': 10.19}, {'connected_gene': 'TMEM222', 'score': 10.19}, {'connected_gene': 'FAM46B', 'score': 10.1}, {'connected_gene': 'RPA2', 'score': 5.06}, {'connected_gene': 'SYTL1', 'score': 4.28}, {'connected_gene': 'STX12', 'score': 4.12}, {'connected_gene': 'SLC9A1', 'score': 1.65}]
chr1 GH01I028090 28090398 28090472 0.25 [{'connected_gene': 'EYA3', 'score': 555.86}, {'connected_gene': 'GC01M028089', 'score': 550.77}, {'connected_gene': 'GC01M028088', 'score': 550.77}, {'connected_gene': 'PTAFR', 'score': 9.73}, {'connected_gene': 'FGR', 'score': 5.81}, {'connected_gene': 'THEMIS2', 'score': 4.7}, {'connected_gene': 'STX12', 'score': 3.63}, {'connected_gene': 'SESN2', 'score': 2.84}, {'connected_gene': 'MED18', 'score': 1.38}, {'connected_gene': 'XKR8', 'score': 1.27}, {'connected_gene': 'SPCS2P4', 'score': 0.44}]
chr1 GH01I027979 27979105 27980201 1.45 [{'connected_gene': 'EYA3', 'score': 39.25}, {'connected_gene': 'FAM76A', 'score': 19.94}, {'connected_gene': 'GMEB1', 'score': 18.14}, {'connected_gene': 'PTAFR', 'score': 17.43}, {'connected_gene': 'THEMIS2', 'score': 16.55}, {'connected_gene': 'YTHDF2', 'score': 15.61}, {'connected_gene': 'ACTG1P20', 'score': 12.38}, {'connected_gene': 'RCC1', 'score': 12.05}, {'connected_gene': 'SMPDL3B', 'score': 12.01}, {'connected_gene': 'RPA2', 'score': 11.65}, {'connected_gene': 'TRNAU1AP', 'score': 11.58}, {'connected_gene': 'PPP1R8', 'score': 10.86}, {'connected_gene': 'SCARNA1', 'score': 10.86}, {'connected_gene': 'RNU6-1245P', 'score': 10.85}, {'connected_gene': 'SNHG12', 'score': 10.2}, {'connected_gene': 'ENSG00000231344', 'score': 9.99}, {'connected_gene': 'ENSG00000270605', 'score': 5.06}, {'connected_gene': 'FGR', 'score': 4.51}, {'connected_gene': 'STX12', 'score': 2.93}, {'connected_gene': 'XKR8', 'score': 1.95}, {'connected_gene': 'SESN2', 'score': 1.82}, {'connected_gene': 'PIR31994', 'score': 0.44}, {'connected_gene': 'ENSG00000238231', 'score': 0.39}]
chr1 GH01I028086 28086745 28089401 2.08 [{'connected_gene': 'EYA3', 'score': 592.35}, {'connected_gene': 'GC01M028089', 'score': 550.77}, {'connected_gene': 'GC01M028088', 'score': 550.77}, {'connected_gene': 'GMEB1', 'score': 29.38}, {'connected_gene': 'YTHDF2', 'score': 27.24}, {'connected_gene': 'SNHG12', 'score': 21.2}, {'connected_gene': 'TRNAU1AP', 'score': 20.99}, {'connected_gene': 'RCC1', 'score': 20.26}, {'connected_gene': 'SNORA73B', 'score': 12.9}, {'connected_gene': 'SNHG3', 'score': 12.45}, {'connected_gene': 'ACTG1P20', 'score': 12.37}, {'connected_gene': 'WASF2', 'score': 10.4}, {'connected_gene': 'FAM76A', 'score': 10.37}, {'connected_gene': 'ENSG00000231344', 'score': 9.98}, {'connected_gene': 'XKR8', 'score': 3.96}, {'connected_gene': 'GC01M028064', 'score': 0.34}]
chr1 GH01I027658 27658103 27664401 2.29 [{'connected_gene': 'LINC02574', 'score': 550.77}, {'connected_gene': 'FGR', 'score': 22.39}, {'connected_gene': 'GPN2', 'score': 15.86}, {'connected_gene': 'ACTG1P20', 'score': 15.15}, {'connected_gene': 'THEMIS2', 'score': 10.66}, {'connected_gene': 'ARID1A', 'score': 10.02}, {'connected_gene': 'TRNAU1AP', 'score': 9.81}, {'connected_gene': 'STX12', 'score': 7.77}, {'connected_gene': 'EYA3', 'score': 4.29}, {'connected_gene': 'XKR8', 'score': 1.4}, {'connected_gene': 'FAM76A', 'score': 1.3}, {'connected_gene': 'SYTL1', 'score': 1.25}, {'connected_gene': 'WASF2', 'score': 1.17}, {'connected_gene': 'LOC729973', 'score': 0.39}]
chr1 GH01I027857 27857670 27859333 1.31 [{'connected_gene': 'ENSG00000227050', 'score': 12.31}, {'connected_gene': 'XKR8', 'score': 12.31}, {'connected_gene': 'SCARNA1', 'score': 11.67}, {'connected_gene': 'PPP1R8', 'score': 11.36}, {'connected_gene': 'RNU6-1245P', 'score': 11.34}, {'connected_gene': 'EYA3', 'score': 10.36}, {'connected_gene': 'PIR39917', 'score': 0.44}, {'connected_gene': 'THEMIS2', 'score': 0.39}, {'connected_gene': 'PIRC3', 'score': 0.37}]
chr1 GH01I027966 27966850 27966999 0.49 [{'connected_gene': 'GC01M027972', 'score': 0.77}, {'connected_gene': 'PIR37901', 'score': 0.77}, {'connected_gene': 'XKR8', 'score': 0.44}, {'connected_gene': 'ENSG00000227050', 'score': 0.44}]
chr1 GH01I027967 27967097 27971396 0.63 [{'connected_gene': 'GC01M027972', 'score': 550.77}, {'connected_gene': 'PIR37901', 'score': 550.77}, {'connected_gene': 'EYA3', 'score': 13.48}, {'connected_gene': 'XKR8', 'score': 8.26}, {'connected_gene': 'RPA2', 'score': 7.1}, {'connected_gene': 'ENSG00000227050', 'score': 0.44}]

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