PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr4	128981932	128981949	CAGE_peak_6_at_LARP1B_5end
chr4	128981954	128981979	CAGE_peak_4_at_LARP1B_5end
chr4	128981999	128982013	CAGE_peak_7_at_LARP1B_5end
chr4	128982416	128982425	CAGE_peak_3_at_LARP1B_5end
chr4	128982430	128982488	CAGE_peak_1_at_LARP1B_5end
chr4	128982491	128982512	CAGE_peak_2_at_LARP1B_5end
chr4	129100483	129100494	CAGE_peak_10_at_LARP1B_5end
chr4	129100507	129100512	CAGE_peak_14_at_LARP1B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I128220	128220079	128221771	0.8	[{'connected_gene': 'ABHD18', 'score': 4.49}, {'connected_gene': 'INTU', 'score': 3.89}, {'connected_gene': 'FOSL1P1', 'score': 0.2}, {'connected_gene': 'PGRMC2', 'score': 0.2}, {'connected_gene': 'LARP1B', 'score': 0.1}]
chr4	GH04I128059	128059904	128063201	2.05	[{'connected_gene': 'LARP1B', 'score': 550.77}, {'connected_gene': 'GC04M128059', 'score': 550.77}, {'connected_gene': 'HSPA4L', 'score': 5.81}, {'connected_gene': 'INTU', 'score': 5.57}, {'connected_gene': 'ABHD18', 'score': 4.82}, {'connected_gene': 'RPL15P8', 'score': 0.44}]
chr4	GH04I128159	128159099	128164868	0.95	[{'connected_gene': 'HSPA4L', 'score': 5.37}, {'connected_gene': 'INTU', 'score': 5.04}, {'connected_gene': 'PGRMC2', 'score': 4.57}, {'connected_gene': 'FOSL1P1', 'score': 0.44}, {'connected_gene': 'LARP1B', 'score': 0.15}]
chr4	GH04I128191	128191201	128192000	0.94	[{'connected_gene': 'HSPA4L', 'score': 5.06}, {'connected_gene': 'FOSL1P1', 'score': 0.28}, {'connected_gene': 'PGRMC2', 'score': 0.15}, {'connected_gene': 'LARP1B', 'score': 0.12}]
chr4	GH04I128069	128069646	128069687	0.22	[{'connected_gene': 'RPL15P8', 'score': 550.77}, {'connected_gene': 'LARP1B', 'score': 0.44}, {'connected_gene': 'FOSL1P1', 'score': 0.17}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000326639	[[128982422, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129133143]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129131208]]
ENST00000264584	[[128982502, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129132287]]	[[128996106, 128996148], [128998942, 128999117], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129131208]]
ENST00000441387	[[128982502, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129128410, 129128538], [129131010, 129132287]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129128410, 129128465]]
ENST00000354456	[[128982502, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129143503, 129143545]]	[[129099644, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129143503, 129143545]]
ENST00000507259	[[129043271, 129043343], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129143503, 129144081]]	[[129043271, 129043343], [129099585, 129099591]]
ENST00000508648	[[129100468, 129100667], [129120593, 129120754], [129121675, 129121820], [129128410, 129128538], [129131010, 129131148], [129141509, 129141595], [129143503, 129143750]]	None
ENST00000506199	[[129100468, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129141509, 129141595], [129143503, 129144086]]	None
ENST00000503725	[[129100501, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129131148], [129141509, 129141595], [129143503, 129143750]]	None
ENST00000512292	[[128982440, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129043636, 129045024]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129043636, 129043669]]
ENST00000508819	[[128982466, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129099585, 129099797], [129100560, 129100565]]	[[128996106, 128996148], [128998942, 128999117], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129099585, 129099797], [129100560, 129100565]]
ENST00000394288	[[128982489, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129029037, 129030056]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129029037, 129029057]]
ENST00000432347	[[128982502, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129030056]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028557]]
ENST00000427266	[[128982502, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043507]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043388]]
ENST00000507377	[[128998995, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043507]]	[[128998995, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043388]]
NM_018078	[[128982420, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129132298]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043343], [129083348, 129083472], [129098026, 129098062], [129099585, 129099797], [129100560, 129100667], [129120593, 129120754], [129121675, 129121820], [129127582, 129127692], [129128410, 129128538], [129131010, 129131208]]
NM_001278604	[[128982420, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129029037, 129030059]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129029037, 129029057]]
NM_032239	[[128982420, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129030059]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028557]]
NM_178043	[[128982420, 128982556], [128995614, 128995673], [128996088, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043508]]	[[128996106, 128996148], [128998942, 128999117], [129003319, 129003460], [129012155, 129012299], [129012501, 129012667], [129019340, 129019485], [129028293, 129028468], [129035724, 129035897], [129042980, 129043388]]