PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000335783	[[49431090, 49431166], [49437871, 49437991], [49438686, 49438741], [49439775, 49439896], [49440502, 49440571], [49448663, 49448793], [49456064, 49456184], [49456319, 49456397], [49459856, 49460820]]	[[49437889, 49437991], [49438686, 49438741], [49439775, 49439896], [49440502, 49440571], [49448663, 49448793], [49456064, 49456184], [49456319, 49456397], [49459856, 49459988]]
NM_018132	[[49431095, 49431166], [49437871, 49437991], [49438686, 49438741], [49439775, 49439896], [49440502, 49440571], [49448663, 49448793], [49456064, 49456184], [49456319, 49456397], [49459856, 49460820]]	[[49437889, 49437991], [49438686, 49438741], [49439775, 49439896], [49440502, 49440571], [49448663, 49448793], [49456064, 49456184], [49456319, 49456397], [49459856, 49459988]]

Promoter

Chrom	Start	End	Description
chr6	49431048	49431059	CAGE_peak_2_at_CENPQ_5end
chr6	49431073	49431135	CAGE_peak_1_at_CENPQ_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I049645	49645230	49648676	1.22	[{'connected_gene': 'RHAG', 'score': 20.38}, {'connected_gene': 'LOC101927020', 'score': 10.5}, {'connected_gene': 'LOC101927048', 'score': 10.5}, {'connected_gene': 'CRISP3', 'score': 10.37}, {'connected_gene': 'C6orf141', 'score': 8.13}, {'connected_gene': 'CENPQ', 'score': 2.19}, {'connected_gene': 'CRISP2', 'score': 0.2}]
chr6	GH06I049555	49555607	49557565	1.38	[{'connected_gene': 'CENPQ', 'score': 12.81}, {'connected_gene': 'PGK2', 'score': 9.9}, {'connected_gene': 'LOC101927020', 'score': 9.35}, {'connected_gene': 'LOC101927048', 'score': 9.35}, {'connected_gene': 'MUT', 'score': 7.51}, {'connected_gene': 'C6orf141', 'score': 0.44}, {'connected_gene': 'CYP2AC1P', 'score': 0.34}]
chr6	GH06I049339	49339241	49339782	0.46	[{'connected_gene': 'CENPQ', 'score': 6.01}, {'connected_gene': 'RNU7-65P', 'score': 0.44}, {'connected_gene': 'ENSG00000217631', 'score': 0.2}]
chr6	GH06I049341	49341787	49343324	0.56	[{'connected_gene': 'CENPQ', 'score': 6.01}, {'connected_gene': 'RNU7-65P', 'score': 0.77}, {'connected_gene': 'ENSG00000217631', 'score': 0.2}]
chr6	GH06I048824	48824960	48829252	1.4	[{'connected_gene': 'CENPQ', 'score': 6.89}, {'connected_gene': 'PIR62700', 'score': 0.25}, {'connected_gene': 'GC06M048881', 'score': 0.2}]
chr6	GH06I049052	49052411	49054959	0.38	[{'connected_gene': 'CENPQ', 'score': 11.27}, {'connected_gene': 'ENSG00000218337', 'score': 0.34}, {'connected_gene': 'GC06P049024', 'score': 0.29}]
chr6	GH06I049325	49325521	49327694	0.69	[{'connected_gene': 'MUT', 'score': 20.21}, {'connected_gene': 'CENPQ', 'score': 6.0}, {'connected_gene': 'RNU7-65P', 'score': 0.37}, {'connected_gene': 'ENSG00000217631', 'score': 0.23}]
chr6	GH06I049461	49461880	49464401	2.08	[{'connected_gene': 'MUT', 'score': 589.43}, {'connected_gene': 'CENPQ', 'score': 550.77}, {'connected_gene': 'GC06P049407', 'score': 0.22}]
chr6	GH06I049523	49523003	49524274	0.94	[{'connected_gene': 'MUT', 'score': 15.98}, {'connected_gene': 'GLYATL3', 'score': 11.92}, {'connected_gene': 'LOC101927020', 'score': 10.07}, {'connected_gene': 'LOC101927048', 'score': 10.06}, {'connected_gene': 'CENPQ', 'score': 6.3}, {'connected_gene': 'GC06P049517', 'score': 0.44}, {'connected_gene': 'GC06M049537', 'score': 0.39}]
chr6	GH06I049532	49532028	49532599	1.07	[{'connected_gene': 'GLYATL3', 'score': 11.97}, {'connected_gene': 'CENPQ', 'score': 7.46}, {'connected_gene': 'GC06M049537', 'score': 0.77}, {'connected_gene': 'GC06P049517', 'score': 0.39}]
chr6	GH06I049479	49479419	49480203	0.38	[{'connected_gene': 'GLYATL3', 'score': 10.9}, {'connected_gene': 'CENPQ', 'score': 0.37}]
chr6	GH06I049499	49499890	49499949	0.5	[{'connected_gene': 'GLYATL3', 'score': 550.77}, {'connected_gene': 'CENPQ', 'score': 0.28}]
chr6	GH06I049528	49528054	49529307	0.38	[{'connected_gene': 'GLYATL3', 'score': 11.89}, {'connected_gene': 'LOC101927020', 'score': 10.06}, {'connected_gene': 'LOC101927048', 'score': 10.06}, {'connected_gene': 'CENPQ', 'score': 4.51}, {'connected_gene': 'GC06M049537', 'score': 0.44}, {'connected_gene': 'GC06P049517', 'score': 0.39}]
chr6	GH06I049569	49569911	49571127	0.6	[{'connected_gene': 'C6orf141', 'score': 17.31}, {'connected_gene': 'CENPQ', 'score': 6.82}, {'connected_gene': 'LOC101927020', 'score': 4.87}, {'connected_gene': 'CYP2AC1P', 'score': 0.44}]
chr6	GH06I049564	49564886	49567269	0.88	[{'connected_gene': 'C6orf141', 'score': 11.17}, {'connected_gene': 'CENPQ', 'score': 9.19}, {'connected_gene': 'LOC101927020', 'score': 4.62}, {'connected_gene': 'CYP2AC1P', 'score': 0.39}]
chr6	GH06I049549	49549688	49555452	2.34	[{'connected_gene': 'C6orf141', 'score': 550.77}, {'connected_gene': 'MUT', 'score': 7.65}, {'connected_gene': 'CENPQ', 'score': 6.7}, {'connected_gene': 'CYP2AC1P', 'score': 0.31}]