PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000053468	[[42174538, 42176110], [42176595, 42176685], [42178225, 42178334], [42179518, 42179655], [42181857, 42181930], [42182017, 42182082], [42185539, 42185603]]	[[42176026, 42176110], [42176595, 42176685], [42178225, 42178334], [42179518, 42179655], [42181857, 42181930], [42182017, 42182082], [42185539, 42185587]]
NM_018141	[[42174538, 42176110], [42176595, 42176685], [42178225, 42178334], [42179518, 42179655], [42181857, 42181930], [42182017, 42182082], [42185539, 42185633]]	[[42176026, 42176110], [42176595, 42176685], [42178225, 42178334], [42179518, 42179655], [42181857, 42181930], [42182017, 42182082], [42185539, 42185587]]

Promoter

Chrom	Start	End	Description
chr6	42185583	42185618	CAGE_peak_1_at_MRPS10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I042260	42260370	42261599	1.26	[{'connected_gene': 'CUL7', 'score': 12.1}, {'connected_gene': 'RPL24P4', 'score': 10.94}, {'connected_gene': 'MED20', 'score': 10.3}, {'connected_gene': 'BICRAL', 'score': 10.07}, {'connected_gene': 'MRPS10', 'score': 8.05}, {'connected_gene': 'LOC105375061', 'score': 0.31}, {'connected_gene': 'GC06M042412', 'score': 0.1}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042219	42219549	42219956	0.2	[{'connected_gene': 'MRPS10', 'score': 565.99}, {'connected_gene': 'MED20', 'score': 9.48}, {'connected_gene': 'BYSL', 'score': 9.48}, {'connected_gene': 'ENSG00000207371', 'score': 9.48}, {'connected_gene': 'PIR36094', 'score': 0.44}]
chr6	GH06I042216	42216272	42218513	2.27	[{'connected_gene': 'MRPS10', 'score': 598.33}, {'connected_gene': 'RRP36', 'score': 11.37}, {'connected_gene': 'GUCA1B', 'score': 0.39}]
chr6	GH06I042221	42221183	42222357	0.66	[{'connected_gene': 'MRPS10', 'score': 13.95}, {'connected_gene': 'BYSL', 'score': 9.48}, {'connected_gene': 'ENSG00000207371', 'score': 9.48}, {'connected_gene': 'MED20', 'score': 9.48}, {'connected_gene': 'PIR36094', 'score': 0.44}]
chr6	GH06I042210	42210223	42211427	0.77	[{'connected_gene': 'MRPS10', 'score': 47.79}, {'connected_gene': 'RPL24P4', 'score': 11.12}, {'connected_gene': 'CUL7', 'score': 10.37}, {'connected_gene': 'PTK7', 'score': 10.29}, {'connected_gene': 'GUCA1B', 'score': 0.77}]
chr6	GH06I042212	42212815	42213275	0.31	[{'connected_gene': 'MRPS10', 'score': 14.37}, {'connected_gene': 'GUCA1B', 'score': 0.44}]
chr6	GH06I042214	42214383	42215200	1.3	[{'connected_gene': 'MRPS10', 'score': 48.32}, {'connected_gene': 'GUCA1B', 'score': 0.44}]
chr6	GH06I042211	42211676	42212469	0.52	[{'connected_gene': 'MRPS10', 'score': 47.9}, {'connected_gene': 'GUCA1B', 'score': 0.44}]
chr6	GH06I042193	42193401	42193800	0.46	[{'connected_gene': 'MRPS10', 'score': 15.81}, {'connected_gene': 'GUCA1B', 'score': 0.39}, {'connected_gene': 'ENSG00000214732', 'score': 0.28}]
chr6	GH06I042196	42196659	42201362	1.27	[{'connected_gene': 'MRPS10', 'score': 48.41}, {'connected_gene': 'GUCA1A', 'score': 11.28}, {'connected_gene': 'ENSG00000214732', 'score': 11.28}, {'connected_gene': 'ENSG00000207371', 'score': 8.86}, {'connected_gene': 'MED20', 'score': 8.86}, {'connected_gene': 'BYSL', 'score': 8.86}, {'connected_gene': 'GUCA1B', 'score': 0.44}]
chr6	GH06I042190	42190403	42191457	0.7	[{'connected_gene': 'MRPS10', 'score': 47.67}, {'connected_gene': 'GUCA1A', 'score': 11.36}, {'connected_gene': 'ENSG00000214732', 'score': 11.36}, {'connected_gene': 'C6orf132', 'score': 11.3}, {'connected_gene': 'GUCA1B', 'score': 0.37}]
chr6	GH06I042164	42164107	42164292	0.2	[{'connected_gene': 'MRPS10', 'score': 32.75}, {'connected_gene': 'GUCA1A', 'score': 0.44}, {'connected_gene': 'ENSG00000214732', 'score': 0.44}, {'connected_gene': 'GUCA1B', 'score': 0.26}]
chr6	GH06I042177	42177603	42179000	0.69	[{'connected_gene': 'MRPS10', 'score': 15.27}, {'connected_gene': 'GUCA1A', 'score': 12.12}, {'connected_gene': 'ENSG00000214732', 'score': 12.12}, {'connected_gene': 'GUCA1B', 'score': 0.31}]
chr6	GH06I042166	42166063	42167472	1.13	[{'connected_gene': 'MRPS10', 'score': 34.31}, {'connected_gene': 'UBR2', 'score': 13.39}, {'connected_gene': 'BICRAL', 'score': 12.98}, {'connected_gene': 'RRP36', 'score': 9.93}, {'connected_gene': 'TAF8', 'score': 9.85}, {'connected_gene': 'GUCA1A', 'score': 0.39}, {'connected_gene': 'ENSG00000214732', 'score': 0.39}, {'connected_gene': 'GUCA1B', 'score': 0.28}]
chr6	GH06I042256	42256808	42258268	0.74	[{'connected_gene': 'MRPS10', 'score': 9.33}, {'connected_gene': 'LOC105375061', 'score': 0.34}, {'connected_gene': 'GC06M042412', 'score': 0.1}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042204	42204031	42205595	0.91	[{'connected_gene': 'GUCA1B', 'score': 550.77}, {'connected_gene': 'MRPS10', 'score': 47.75}, {'connected_gene': 'GUCA1A', 'score': 11.14}, {'connected_gene': 'ENSG00000214732', 'score': 11.14}]
chr6	GH06I042242	42242334	42243707	0.43	[{'connected_gene': 'GUCA1B', 'score': 10.66}, {'connected_gene': 'MRPS10', 'score': 10.33}, {'connected_gene': 'LOC105375061', 'score': 0.44}, {'connected_gene': 'GC06M042412', 'score': 0.1}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042241	42241814	42242205	0.51	[{'connected_gene': 'GUCA1B', 'score': 10.66}, {'connected_gene': 'MRPS10', 'score': 9.62}, {'connected_gene': 'LOC105375061', 'score': 0.44}, {'connected_gene': 'GC06M042412', 'score': 0.09}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042230	42230481	42232038	0.69	[{'connected_gene': 'GUCA1B', 'score': 10.97}, {'connected_gene': 'MRPS10', 'score': 10.29}, {'connected_gene': 'LOC105375061', 'score': 0.77}, {'connected_gene': 'PIR36094', 'score': 0.77}, {'connected_gene': 'TRERF1', 'score': 0.07}]
chr6	GH06I042238	42238580	42240781	0.8	[{'connected_gene': 'GUCA1B', 'score': 10.68}, {'connected_gene': 'MRPS10', 'score': 10.19}, {'connected_gene': 'LOC105375061', 'score': 0.44}, {'connected_gene': 'GC06M042412', 'score': 0.09}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042250	42250042	42253816	1.15	[{'connected_gene': 'GUCA1B', 'score': 10.72}, {'connected_gene': 'GUCA1A', 'score': 10.49}, {'connected_gene': 'ENSG00000214732', 'score': 10.49}, {'connected_gene': 'MRPS10', 'score': 10.15}, {'connected_gene': 'LOC105375061', 'score': 0.37}, {'connected_gene': 'GC06M042412', 'score': 0.1}, {'connected_gene': 'TRERF1', 'score': 0.08}]
chr6	GH06I042276	42276001	42277567	0.71	[{'connected_gene': 'GUCA1B', 'score': 10.7}, {'connected_gene': 'GUCA1A', 'score': 10.33}, {'connected_gene': 'ENSG00000214732', 'score': 10.33}, {'connected_gene': 'TAF8', 'score': 7.07}, {'connected_gene': 'MRPS10', 'score': 4.67}, {'connected_gene': 'LOC105375061', 'score': 0.26}, {'connected_gene': 'GC06M042412', 'score': 0.12}, {'connected_gene': 'TRERF1', 'score': 0.1}]
chr6	GH06I042223	42223863	42229740	1.41	[{'connected_gene': 'PIR36094', 'score': 550.77}, {'connected_gene': 'MRPS10', 'score': 43.22}, {'connected_gene': 'GUCA1B', 'score': 11.43}, {'connected_gene': 'GUCA1A', 'score': 10.71}, {'connected_gene': 'ENSG00000214732', 'score': 10.71}, {'connected_gene': 'C6orf132', 'score': 10.26}, {'connected_gene': 'TRERF1', 'score': 0.07}]