PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000266673	[[72079866, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72092889], [72094611, 72097836]]	[[72080460, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72092889], [72094611, 72094775]]
ENST00000550524	[[72079893, 72080100], [72080439, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091188]]	[[72080460, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091188]]
ENST00000549735	[[72080275, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72093629]]	[[72080460, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72092939]]
ENST00000546677	[[72083403, 72083484], [72084118, 72084210], [72090215, 72090353], [72091059, 72091314], [72092679, 72092774]]	[[72090274, 72090353], [72091059, 72091314], [72092679, 72092774]]
ENST00000546795	[[72091145, 72091314], [72092679, 72092889], [72094611, 72094658], [72097756, 72097836]]	[[72091145, 72091314], [72092679, 72092889], [72094611, 72094658], [72097756, 72097831]]
ENST00000550787	[[72091231, 72091314], [72092679, 72092889], [72094611, 72094805], [72097756, 72097836]]	[[72091231, 72091314], [72092679, 72092889], [72094611, 72094775]]
NM_018279	[[72079877, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72092889], [72094611, 72097840]]	[[72080460, 72080590], [72083370, 72083484], [72090215, 72090353], [72091059, 72091314], [72092679, 72092889], [72094611, 72094775]]

Promoter

Chrom	Start	End	Description
chr12	72079842	72079890	CAGE_peak_1_at_TMEM19_5end
chr12	72080145	72080169	CAGE_peak_5_at_TMEM19_5end
chr12	72080171	72080193	CAGE_peak_4_at_TMEM19_5end
chr12	72080253	72080293	CAGE_peak_3_at_TMEM19_5end
chr12	72080299	72080335	CAGE_peak_2_at_TMEM19_5end
chr12	72080344	72080367	CAGE_peak_6_at_TMEM19_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I071654	71654469	71656364	0.62	[{'connected_gene': 'TMEM19', 'score': 11.55}, {'connected_gene': 'ENSG00000257515', 'score': 6.39}, {'connected_gene': 'THAP2', 'score': 0.44}, {'connected_gene': 'ZFC3H1', 'score': 0.39}, {'connected_gene': 'ENSG00000212461', 'score': 0.37}]
chr12	GH12I071747	71747101	71747250	0.64	[{'connected_gene': 'TMEM19', 'score': 11.39}, {'connected_gene': 'ZFC3H1', 'score': 11.13}, {'connected_gene': 'THAP2', 'score': 11.12}, {'connected_gene': 'ENSG00000212461', 'score': 10.96}, {'connected_gene': 'RAB21', 'score': 0.44}, {'connected_gene': 'ENSG00000257515', 'score': 0.28}]
chr12	GH12I071650	71650447	71653218	0.56	[{'connected_gene': 'TMEM19', 'score': 11.55}, {'connected_gene': 'ENSG00000257515', 'score': 7.26}, {'connected_gene': 'ZFC3H1', 'score': 5.32}, {'connected_gene': 'THAP2', 'score': 0.39}, {'connected_gene': 'ENSG00000212461', 'score': 0.39}]
chr12	GH12I071658	71658352	71660740	0.2	[{'connected_gene': 'TMEM19', 'score': 11.56}, {'connected_gene': 'ENSG00000212461', 'score': 11.49}, {'connected_gene': 'ENSG00000257515', 'score': 7.32}, {'connected_gene': 'ZFC3H1', 'score': 4.57}, {'connected_gene': 'THAP2', 'score': 0.77}]
chr12	GH12I071719	71719592	71720743	0.31	[{'connected_gene': 'TMEM19', 'score': 11.25}, {'connected_gene': 'ZFC3H1', 'score': 10.99}, {'connected_gene': 'ENSG00000257515', 'score': 6.51}, {'connected_gene': 'RAB21', 'score': 0.29}]
chr12	GH12I071731	71731471	71732469	1.13	[{'connected_gene': 'TMEM19', 'score': 11.77}, {'connected_gene': 'ZFC3H1', 'score': 11.57}, {'connected_gene': 'ENSG00000257515', 'score': 6.69}, {'connected_gene': 'RAB21', 'score': 0.34}]
chr12	GH12I071721	71721888	71722428	0.62	[{'connected_gene': 'TMEM19', 'score': 11.23}, {'connected_gene': 'ZFC3H1', 'score': 10.99}, {'connected_gene': 'ENSG00000257515', 'score': 0.39}, {'connected_gene': 'RAB21', 'score': 0.29}]
chr12	GH12I071683	71683681	71689752	2.27	[{'connected_gene': 'TMEM19', 'score': 550.77}, {'connected_gene': 'ENSG00000257515', 'score': 7.6}, {'connected_gene': 'ENSG00000258064', 'score': 0.39}]
chr12	GH12I071753	71753104	71753160	0.89	[{'connected_gene': 'RAB21', 'score': 550.77}, {'connected_gene': 'TMEM19', 'score': 11.42}, {'connected_gene': 'ZFC3H1', 'score': 11.24}, {'connected_gene': 'THAP2', 'score': 11.23}, {'connected_gene': 'ENSG00000212461', 'score': 10.82}, {'connected_gene': 'ENSG00000257515', 'score': 0.26}]
chr12	GH12I071661	71661475	71666229	2.31	[{'connected_gene': 'ZFC3H1', 'score': 550.77}, {'connected_gene': 'THAP2', 'score': 550.77}, {'connected_gene': 'TMEM19', 'score': 10.76}, {'connected_gene': 'ENSG00000257515', 'score': 7.4}]
chr12	GH12I071693	71693404	71695452	0.84	[{'connected_gene': 'ZFC3H1', 'score': 11.56}, {'connected_gene': 'ENSG00000257515', 'score': 8.56}, {'connected_gene': 'TMEM19', 'score': 5.2}, {'connected_gene': 'ENSG00000258064', 'score': 0.34}]
chr12	GH12I071671	71671721	71672352	1.03	[{'connected_gene': 'ENSG00000257515', 'score': 6.22}, {'connected_gene': 'TMEM19', 'score': 4.69}, {'connected_gene': 'ZFC3H1', 'score': 0.77}, {'connected_gene': 'ENSG00000258064', 'score': 0.77}, {'connected_gene': 'THAP2', 'score': 0.44}]
chr12	GH12I071709	71709677	71711350	0.83	[{'connected_gene': 'ENSG00000257515', 'score': 557.44}, {'connected_gene': 'TMEM19', 'score': 12.17}, {'connected_gene': 'ZFC3H1', 'score': 11.08}, {'connected_gene': 'RAB21', 'score': 0.26}]
chr12	GH12I071691	71691533	71692570	0.63	[{'connected_gene': 'ENSG00000257515', 'score': 7.79}, {'connected_gene': 'TMEM19', 'score': 0.44}, {'connected_gene': 'ENSG00000258064', 'score': 0.37}]