PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000424486	[[53796987, 53798496], [53799979, 53800217]]	[[53798026, 53798431]]
ENST00000575734	[[53797278, 53798496], [53799979, 53800090], [53805161, 53805343], [53809031, 53809482]]	[[53798026, 53798431]]
ENST00000571679	[[53798043, 53798496], [53798892, 53799159]]	[[53798043, 53798431]]
ENST00000575685	[[53798823, 53799179], [53799979, 53800090], [53800286, 53800385]]	None
ENST00000570586	[[53798861, 53799179], [53799973, 53800225]]	None
ENST00000575806	[[53799916, 53800090], [53805161, 53805343], [53809031, 53809245]]	None
NM_018286	[[53796987, 53798496], [53799979, 53800225]]	[[53798026, 53798431]]
NM_001099640	[[53796987, 53798496], [53799979, 53800090], [53805161, 53805343], [53809031, 53809482]]	[[53798026, 53798431]]

Promoter

Chrom	Start	End	Description
chr17	53800009	53800012	CAGE_peak_11_at_TMEM100_5end
chr17	53800218	53800231	CAGE_peak_1_at_TMEM100_5end
chr17	53809214	53809228	CAGE_peak_5_at_TMEM100_5end
chr17	53809233	53809251	CAGE_peak_3_at_TMEM100_5end
chr17	53809295	53809312	CAGE_peak_4_at_TMEM100_5end
chr17	53809407	53809415	CAGE_peak_6_at_TMEM100_5end
chr17	53809436	53809455	CAGE_peak_2_at_TMEM100_5end
chr17	53809473	53809480	CAGE_peak_10_at_TMEM100_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I055815	55815553	55818450	0.96	[{'connected_gene': 'TMEM100', 'score': 10.47}, {'connected_gene': 'PCTP', 'score': 7.17}, {'connected_gene': 'GC17P055809', 'score': 0.44}, {'connected_gene': 'GC17P055843', 'score': 0.31}]
chr17	GH17I055763	55763801	55764574	0.82	[{'connected_gene': 'TMEM100', 'score': 11.65}, {'connected_gene': 'PCTP', 'score': 10.15}, {'connected_gene': 'GC17P055774', 'score': 0.39}]
chr17	GH17I055760	55760801	55761000	0.43	[{'connected_gene': 'TMEM100', 'score': 11.51}, {'connected_gene': 'PCTP', 'score': 0.44}, {'connected_gene': 'GC17P055774', 'score': 0.39}]
chr17	GH17I055768	55768302	55770509	0.87	[{'connected_gene': 'TMEM100', 'score': 12.13}, {'connected_gene': 'PCTP', 'score': 8.1}, {'connected_gene': 'GC17P055774', 'score': 0.77}]
chr17	GH17I055575	55575520	55578145	1.08	[{'connected_gene': 'TMEM100', 'score': 10.61}, {'connected_gene': 'LOC102724732', 'score': 0.39}, {'connected_gene': 'LOC100418888', 'score': 0.37}, {'connected_gene': 'ENSG00000236319', 'score': 0.37}]
chr17	GH17I055584	55584001	55584201	0.73	[{'connected_gene': 'TMEM100', 'score': 10.26}, {'connected_gene': 'LOC102724732', 'score': 0.44}, {'connected_gene': 'LOC100418888', 'score': 0.34}, {'connected_gene': 'ENSG00000236319', 'score': 0.34}]
chr17	GH17I055609	55609179	55610854	0.66	[{'connected_gene': 'TMEM100', 'score': 10.29}, {'connected_gene': 'LOC101927389', 'score': 0.77}, {'connected_gene': 'LOC102724732', 'score': 0.34}]
chr17	GH17I055668	55668020	55669179	0.38	[{'connected_gene': 'TMEM100', 'score': 11.07}, {'connected_gene': 'GC17M055683', 'score': 0.39}, {'connected_gene': 'LOC101927389', 'score': 0.22}]
chr17	GH17I055674	55674001	55674401	0.6	[{'connected_gene': 'TMEM100', 'score': 11.29}, {'connected_gene': 'GC17M055683', 'score': 0.44}, {'connected_gene': 'LOC101927389', 'score': 0.21}]
chr17	GH17I055672	55672201	55673201	0.66	[{'connected_gene': 'TMEM100', 'score': 11.29}, {'connected_gene': 'GC17M055683', 'score': 0.44}, {'connected_gene': 'LOC101927389', 'score': 0.22}]
chr17	GH17I055706	55706440	55707609	0.63	[{'connected_gene': 'TMEM100', 'score': 12.91}, {'connected_gene': 'PIR59591', 'score': 0.77}, {'connected_gene': 'GC17M055704', 'score': 0.77}]
chr17	GH17I055692	55692815	55693853	1.09	[{'connected_gene': 'TMEM100', 'score': 11.38}, {'connected_gene': 'GC17M055693', 'score': 0.44}, {'connected_gene': 'GC17M055683', 'score': 0.39}]
chr17	GH17I055690	55690240	55690349	0.63	[{'connected_gene': 'TMEM100', 'score': 11.36}, {'connected_gene': 'GC17M055693', 'score': 0.44}, {'connected_gene': 'GC17M055683', 'score': 0.44}]
chr17	GH17I055730	55730931	55732973	1.79	[{'connected_gene': 'TMEM100', 'score': 550.77}, {'connected_gene': 'GC17P055722', 'score': 0.44}, {'connected_gene': 'GC17M055731', 'score': 0.44}]
chr17	GH17I055733	55733080	55733229	0.8	[{'connected_gene': 'TMEM100', 'score': 550.77}, {'connected_gene': 'GC17M055731', 'score': 0.77}]
chr17	GH17I055725	55725381	55725757	1.57	[{'connected_gene': 'TMEM100', 'score': 550.44}, {'connected_gene': 'GC17P055722', 'score': 0.77}]
chr17	GH17I055514	55514120	55514289	0.83	[{'connected_gene': 'MMD', 'score': 11.6}, {'connected_gene': 'TMEM100', 'score': 10.47}, {'connected_gene': 'SMIM36', 'score': 0.77}, {'connected_gene': 'GARSP1', 'score': 0.28}, {'connected_gene': 'LOC105371833', 'score': 0.25}]
chr17	GH17I055701	55701354	55703280	0.46	[{'connected_gene': 'PIR59591', 'score': 550.77}, {'connected_gene': 'TMEM100', 'score': 12.08}, {'connected_gene': 'COX11', 'score': 4.79}, {'connected_gene': 'GC17M055693', 'score': 0.77}]
chr17	GH17I055726	55726295	55726937	1	[{'connected_gene': 'GC17P055722', 'score': 0.77}, {'connected_gene': 'TMEM100', 'score': 0.44}]
chr17	GH17I055708	55708846	55711922	0.54	[{'connected_gene': 'GC17M055704', 'score': 550.77}, {'connected_gene': 'TMEM100', 'score': 12.93}, {'connected_gene': 'PIR59591', 'score': 0.44}]
chr17	GH17I055722	55722318	55723498	2.04	[{'connected_gene': 'GC17P055722', 'score': 550.77}, {'connected_gene': 'TMEM100', 'score': 550.44}, {'connected_gene': 'GC17M055704', 'score': 0.39}]