PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000260453	[[56720928, 56721391], [56723570, 56723696], [56726335, 56726593], [56735627, 56735735], [56735835, 56736052], [56736641, 56736871], [56739038, 56739141], [56748591, 56748719], [56756223, 56756445], [56757167, 56757335]]	[[56721298, 56721391], [56723570, 56723696], [56726335, 56726593], [56735627, 56735735], [56735835, 56736052], [56736641, 56736871], [56739038, 56739141], [56748591, 56748719], [56756223, 56756445], [56757167, 56757170]]
ENST00000566386	[[56713741, 56713976], [56721283, 56721391], [56723570, 56723696], [56726335, 56726405]]	None
ENST00000558694	[[56755977, 56756445], [56757167, 56757283]]	None
NM_018365	[[56720928, 56721391], [56723570, 56723696], [56726335, 56726593], [56735627, 56735735], [56735835, 56736052], [56736641, 56736871], [56739038, 56739141], [56748591, 56748719], [56756223, 56756445], [56757167, 56757335]]	[[56721298, 56721391], [56723570, 56723696], [56726335, 56726593], [56735627, 56735735], [56735835, 56736052], [56736641, 56736871], [56739038, 56739141], [56748591, 56748719], [56756223, 56756445], [56757167, 56757170]]

Promoter

Chrom	Start	End	Description
chr15	56757233	56757314	CAGE_peak_1_at_MNS1_5end
chr15	56757329	56757342	CAGE_peak_2_at_MNS1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I056425	56425741	56425924	0.22	[{'connected_gene': 'RFX7', 'score': 2.22}, {'connected_gene': 'MNS1', 'score': 1.9}, {'connected_gene': 'ZNF280D', 'score': 1.4}, {'connected_gene': 'TEX9', 'score': 1.24}, {'connected_gene': 'ENSG00000261823', 'score': 0.37}, {'connected_gene': 'ENSG00000277245', 'score': 0.34}]
chr15	GH15I056184	56183652	56183970	0.22	[{'connected_gene': 'MNS1', 'score': 1.63}, {'connected_gene': 'LOC390586', 'score': 0.44}, {'connected_gene': 'GC15M057416', 'score': 0.37}, {'connected_gene': 'GC15M057437', 'score': 0.37}, {'connected_gene': 'RFX7', 'score': 0.22}, {'connected_gene': 'GC15P056091', 'score': 0.16}]
chr15	GH15I056464	56464400	56465712	1.95	[{'connected_gene': 'MNS1', 'score': 550.77}, {'connected_gene': 'TEX9', 'score': 5.83}, {'connected_gene': 'PIR31560', 'score': 0.44}, {'connected_gene': 'GC15M057417', 'score': 0.44}]
chr15	GH15I056037	56037742	56044220	1.53	[{'connected_gene': 'ZNF280D', 'score': 48.6}, {'connected_gene': 'RSL24D1', 'score': 23.8}, {'connected_gene': 'TEX9', 'score': 21.36}, {'connected_gene': 'PYGO1', 'score': 21.28}, {'connected_gene': 'PRTG', 'score': 21.17}, {'connected_gene': 'RFX7', 'score': 20.34}, {'connected_gene': 'MNS1', 'score': 19.09}, {'connected_gene': 'TCF12', 'score': 12.6}, {'connected_gene': 'PIGBOS1', 'score': 11.12}, {'connected_gene': 'RN7SL568P', 'score': 0.39}, {'connected_gene': 'CD24P2', 'score': 0.29}]
chr15	GH15I055823	55823303	55823532	0.93	[{'connected_gene': 'PYGO1', 'score': 14.36}, {'connected_gene': 'TEX9', 'score': 13.21}, {'connected_gene': 'PRTG', 'score': 12.04}, {'connected_gene': 'PIGBOS1', 'score': 11.13}, {'connected_gene': 'MNS1', 'score': 10.69}, {'connected_gene': 'GC15P055749', 'score': 0.19}, {'connected_gene': 'NEDD4', 'score': 0.09}]