PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000381842	[[11418856, 11418962], [11420108, 11420335], [11420336, 11420452], [11420578, 11421082], [11421566, 11421602], [11422539, 11422641]]	[[11420125, 11420335], [11420336, 11420452], [11420578, 11421082], [11421566, 11421602], [11422539, 11422603]]
ENST00000279573	[[11418888, 11418962], [11420108, 11421082], [11421566, 11421602], [11422539, 11422739]]	[[11420291, 11421082], [11421566, 11421602], [11422539, 11422603]]
ENST00000440870	[[11418889, 11418962], [11420108, 11420359], [11420926, 11421082], [11421566, 11421602], [11422539, 11422641]]	None
ENST00000538488	[[11418889, 11418962], [11420108, 11420335], [11420336, 11420452], [11420515, 11420767], [11420830, 11421082], [11421566, 11421602], [11422539, 11422641]]	[[11420125, 11420335], [11420336, 11420452], [11420515, 11420767], [11420830, 11421082], [11421566, 11421602], [11422539, 11422603]]
ENST00000539835	[[11420713, 11421082], [11421566, 11421673]]	None
NM_006249	[[11418846, 11418962], [11420108, 11420333], [11420334, 11420407], [11420533, 11421082], [11421566, 11421602], [11422539, 11422641]]	[[11420125, 11420333], [11420334, 11420407], [11420533, 11421082], [11421566, 11421602], [11422539, 11422603]]

Promoter

Chrom	Start	End	Description
chr12	11421586	11421606	CAGE_peak_2_at_PRB3_5end
chr12	11422630	11422648	CAGE_peak_1_at_PRB3_5end
chr12	11422801	11422812	CAGE_peak_4_at_PRB3_5end
chr12	11422834	11422844	CAGE_peak_3_at_PRB3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I011307	11307711	11307762	0.22	[{'connected_gene': 'PRB1', 'score': 67.61}, {'connected_gene': 'PRB4', 'score': 65.32}, {'connected_gene': 'PRB3', 'score': 64.82}, {'connected_gene': 'PRB2', 'score': 64.63}, {'connected_gene': 'PRH1', 'score': 37.43}, {'connected_gene': 'PRH2', 'score': 29.77}]
chr12	GH12I011269	11269697	11269756	0.5	[{'connected_gene': 'PRB3', 'score': 550.77}, {'connected_gene': 'PIR33674', 'score': 0.77}]