PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000328848	[[34633916, 34634309], [34635220, 34635378]]	[[34634168, 34634309], [34635220, 34635274]]
ENST00000557912	[[34633919, 34634251], [34635220, 34635324]]	[[34634194, 34634251], [34635220, 34635274]]
NM_018648	[[34633916, 34634309], [34635220, 34635362]]	[[34634168, 34634309], [34635220, 34635274]]

Promoter

Chrom	Start	End	Description
chr15	34635297	34635308	CAGE_peak_2_at_NOP10_5end
chr15	34635314	34635368	CAGE_peak_1_at_NOP10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I034317	34316852	34320744	2.15	[{'connected_gene': 'SLC12A6', 'score': 568.43}, {'connected_gene': 'NOP10', 'score': 60.71}, {'connected_gene': 'GOLGA8A', 'score': 13.04}, {'connected_gene': 'AQR', 'score': 12.82}, {'connected_gene': 'ENSG00000259287', 'score': 11.81}, {'connected_gene': 'LOC101929988', 'score': 10.85}, {'connected_gene': 'EMC4', 'score': 8.82}, {'connected_gene': 'ENSG00000207091', 'score': 0.77}]
chr15	GH15I034331	34331189	34339290	2.73	[{'connected_gene': 'SLC12A6', 'score': 556.43}, {'connected_gene': 'NOP10', 'score': 66.24}, {'connected_gene': 'GOLGA8A', 'score': 13.06}, {'connected_gene': 'AQR', 'score': 12.82}, {'connected_gene': 'ENSG00000259287', 'score': 11.81}, {'connected_gene': 'LOC101929988', 'score': 10.85}, {'connected_gene': 'PRELID1P4', 'score': 9.88}, {'connected_gene': 'ENSG00000207091', 'score': 0.34}]
chr15	GH15I034208	34208534	34210729	2.01	[{'connected_gene': 'KATNBL1', 'score': 557.17}, {'connected_gene': 'NOP10', 'score': 15.59}, {'connected_gene': 'PIR44117', 'score': 0.15}]
chr15	GH15I034303	34303082	34307325	0.54	[{'connected_gene': 'NOP10', 'score': 30.71}, {'connected_gene': 'SLC12A6', 'score': 30.2}, {'connected_gene': 'NUTM1', 'score': 11.88}, {'connected_gene': 'KATNBL1', 'score': 10.7}, {'connected_gene': 'EMC4', 'score': 10.64}, {'connected_gene': 'GC15P034315', 'score': 0.44}, {'connected_gene': 'ENSG00000259468', 'score': 0.25}]
chr15	GH15I034246	34246018	34247411	0.38	[{'connected_gene': 'NOP10', 'score': 51.16}, {'connected_gene': 'SLC12A6', 'score': 11.89}, {'connected_gene': 'NUTM1', 'score': 11.88}, {'connected_gene': 'LPCAT4', 'score': 11.67}, {'connected_gene': 'KATNBL1', 'score': 11.64}, {'connected_gene': 'GOLGA8B', 'score': 4.39}, {'connected_gene': 'ENSG00000259468', 'score': 0.44}, {'connected_gene': 'EMC4', 'score': 0.34}]
chr15	GH15I034332	34331085	34331147	0.51	[{'connected_gene': 'NOP10', 'score': 17.94}, {'connected_gene': 'SLC12A6', 'score': 0.44}, {'connected_gene': 'ENSG00000207091', 'score': 0.37}]
chr15	GH15I034327	34327307	34329953	0.97	[{'connected_gene': 'NOP10', 'score': 62.22}, {'connected_gene': 'SLC12A6', 'score': 0.44}, {'connected_gene': 'ENSG00000207091', 'score': 0.39}]
chr15	GH15I034238	34238054	34242346	0.89	[{'connected_gene': 'NOP10', 'score': 37.71}, {'connected_gene': 'KATNBL1', 'score': 11.66}, {'connected_gene': 'SLC12A6', 'score': 11.5}, {'connected_gene': 'NUTM1', 'score': 11.5}, {'connected_gene': 'EMC4', 'score': 0.37}, {'connected_gene': 'ENSG00000259468', 'score': 0.37}]
chr15	GH15I034182	34182478	34183993	0.6	[{'connected_gene': 'NOP10', 'score': 17.71}, {'connected_gene': 'KATNBL1', 'score': 17.47}, {'connected_gene': 'AVEN', 'score': 10.79}, {'connected_gene': 'PIR44117', 'score': 0.18}]
chr15	GH15I034217	34217538	34218329	0.65	[{'connected_gene': 'NOP10', 'score': 12.84}, {'connected_gene': 'KATNBL1', 'score': 7.57}, {'connected_gene': 'EMC4', 'score': 0.44}]
chr15	GH15I034213	34213720	34215072	0.43	[{'connected_gene': 'NOP10', 'score': 32.47}, {'connected_gene': 'KATNBL1', 'score': 7.63}, {'connected_gene': 'EMC4', 'score': 0.39}]
chr15	GH15I034154	34154313	34155882	0.74	[{'connected_gene': 'NOP10', 'score': 20.94}, {'connected_gene': 'KATNBL1', 'score': 6.07}, {'connected_gene': 'PIR44117', 'score': 0.25}]
chr15	GH15I034161	34161417	34162423	0.59	[{'connected_gene': 'NOP10', 'score': 11.68}, {'connected_gene': 'KATNBL1', 'score': 11.46}, {'connected_gene': 'PIR44117', 'score': 0.22}]
chr15	GH15I034341	34341500	34343809	2.29	[{'connected_gene': 'NOP10', 'score': 632.36}, {'connected_gene': 'NUTM1', 'score': 550.77}, {'connected_gene': 'SLC12A6', 'score': 0.77}]
chr15	GH15I034223	34223673	34226135	2.08	[{'connected_gene': 'EMC4', 'score': 550.77}, {'connected_gene': 'NOP10', 'score': 46.59}, {'connected_gene': 'AQR', 'score': 29.31}, {'connected_gene': 'HNRNPLP2', 'score': 24.12}, {'connected_gene': 'NUTM1', 'score': 21.32}, {'connected_gene': 'SLC12A6', 'score': 11.03}, {'connected_gene': 'KATNBL1', 'score': 4.81}]
chr15	GH15I034121	34121501	34125898	0.87	[{'connected_gene': 'PGBD4', 'score': 12.37}, {'connected_gene': 'EMC7', 'score': 12.37}, {'connected_gene': 'KATNBL1', 'score': 11.64}, {'connected_gene': 'NOP10', 'score': 5.34}, {'connected_gene': 'SLC12A6', 'score': 4.87}, {'connected_gene': 'GOLGA8B', 'score': 4.83}, {'connected_gene': 'PIR44117', 'score': 0.37}]
chr15	GH15I034316	34316401	34316600	0.58	[{'connected_gene': 'GC15P034315', 'score': 550.77}, {'connected_gene': 'ENSG00000207091', 'score': 550.77}, {'connected_gene': 'NOP10', 'score': 5.89}, {'connected_gene': 'SLC12A6', 'score': 0.34}]