PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000456315	[[68939834, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68947728, 68948580], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962797]]	[[68942614, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68947728, 68948580], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962682]]
ENST00000370966	[[68939834, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962904]]	[[68942614, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962682]]
ENST00000488146	[[68941256, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947921]]	None
ENST00000489862	[[68942579, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68948323, 68948580], [68948955, 68948988], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955168], [68955252, 68955291], [68960112, 68960214]]	[[68947274, 68947295], [68948323, 68948580], [68948955, 68948988], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955168], [68955252, 68955291], [68960112, 68960214]]
ENST00000525124	[[68952623, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68962634, 68962765]]	[[68952623, 68952667], [68954056, 68954114]]
NM_001114120	[[68939834, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68947728, 68948580], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962904]]	[[68942614, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68947728, 68948580], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962682]]
NM_017779	[[68939834, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962904]]	[[68942614, 68942752], [68943469, 68943655], [68944826, 68945003], [68947122, 68947295], [68949632, 68949773], [68952619, 68952667], [68954056, 68954187], [68954598, 68954717], [68955134, 68955291], [68960112, 68960378], [68962634, 68962682]]

Promoter

Chrom	Start	End	Description
chr1	68962719	68962736	CAGE_peak_2_at_DEPDC1_5end
chr1	68962744	68962772	CAGE_peak_1_at_DEPDC1_5end
chr1	68962782	68962801	CAGE_peak_3_at_DEPDC1_5end
chr1	68962805	68962810	CAGE_peak_4_at_DEPDC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I068495	68495231	68497807	2.02	[{'connected_gene': 'DEPDC1-AS1', 'score': 550.77}, {'connected_gene': 'DEPDC1', 'score': 550.77}, {'connected_gene': 'ENSG00000233589', 'score': 0.37}]
chr1	GH01I068144	68144865	68146985	0.67	[{'connected_gene': 'MIR1262', 'score': 11.03}, {'connected_gene': 'GNG12-AS1', 'score': 8.71}, {'connected_gene': 'GNG12', 'score': 8.71}, {'connected_gene': 'DEPDC1', 'score': 5.14}, {'connected_gene': 'CTBP2P8', 'score': 0.37}, {'connected_gene': 'GC01M068050', 'score': 0.2}, {'connected_gene': 'WLS', 'score': 0.17}]
chr1	GH01I068479	68479803	68480099	0.35	[{'connected_gene': 'ENSG00000233589', 'score': 550.77}, {'connected_gene': 'DEPDC1-AS1', 'score': 0.37}, {'connected_gene': 'DEPDC1', 'score': 0.37}]