PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000394236	[[93591880, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93692517, 93692910]]	[[93593088, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93692517, 93692593]]
ENST00000407433	[[93591952, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93677354, 93677598]]	[[93593088, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624940]]
ENST00000348974	[[93624631, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93647545, 93647641], [93692517, 93692706]]	[[93624631, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93647545, 93647641], [93692517, 93692593]]
ENST00000472684	[[93624667, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93692406, 93692483]]	[[93624667, 93624759], [93624864, 93624940]]
ENST00000488658	[[93624883, 93624987], [93629462, 93630001]]	None
NM_001314077	[[93591880, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93647545, 93647641], [93692517, 93692925]]	[[93593088, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93647545, 93647641], [93692517, 93692593]]
NM_000313	[[93591880, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93692517, 93692934]]	[[93593088, 93593249], [93595809, 93596035], [93598006, 93598158], [93603571, 93603740], [93605179, 93605347], [93611776, 93611966], [93615419, 93615535], [93617291, 93617413], [93619647, 93619773], [93624627, 93624759], [93624864, 93624987], [93629462, 93629549], [93643083, 93643108], [93646093, 93646251], [93692517, 93692593]]

Promoter

Chrom	Start	End	Description
chr3	93629893	93629924	CAGE_peak_6_at_PROS1_5end
chr3	93692681	93692762	CAGE_peak_1_at_PROS1_5end
chr3	93692781	93692799	CAGE_peak_2_at_PROS1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I093877	93877917	93879056	0.2	[{'connected_gene': 'PROS1', 'score': 7.83}, {'connected_gene': 'PIR37198', 'score': 0.44}, {'connected_gene': 'GC03M093906', 'score': 0.31}, {'connected_gene': 'GC03M093874', 'score': 0.23}]
chr3	GH03I094258	94258607	94260177	0.31	[{'connected_gene': 'PROS1', 'score': 4.95}, {'connected_gene': 'GC03M094207', 'score': 0.44}, {'connected_gene': 'GC03P094109', 'score': 0.11}]
chr3	GH03I093972	93972786	93974816	1.99	[{'connected_gene': 'PROS1', 'score': 558.92}, {'connected_gene': 'ENSG00000201339', 'score': 0.44}]
chr3	GH03I094332	94332174	94334985	0.63	[{'connected_gene': 'STX19', 'score': 8.21}, {'connected_gene': 'PROS1', 'score': 3.77}, {'connected_gene': 'GC03P094366', 'score': 0.29}, {'connected_gene': 'GC03M094207', 'score': 0.2}]
chr3	GH03I093843	93843349	93845018	0.79	[{'connected_gene': 'RNU6-488P', 'score': 550.77}, {'connected_gene': 'STX19', 'score': 11.57}, {'connected_gene': 'PROS1', 'score': 4.16}, {'connected_gene': 'PIR37198', 'score': 0.31}]
chr3	GH03I093969	93969517	93969686	0.49	[{'connected_gene': 'GC03P093968', 'score': 550.77}, {'connected_gene': 'ENSG00000201339', 'score': 550.77}, {'connected_gene': 'PROS1', 'score': 9.57}]